CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012838.1-P	Field mustard	cytosol	97.85	98.7
CDY29045	Canola	cytosol	95.81	95.29
CDX78038	Canola	cytosol	87.63	88.68
CDX73693	Canola	cytosol	88.82	87.59
AT3G51770.2	Thale cress	cytosol	86.88	84.25
CDX91443	Canola	cytosol, plastid	77.96	79.23
CDX74897	Canola	plastid	77.53	79.14
CDY14472	Canola	cytosol	75.48	78.0
CDY07743	Canola	cytosol, plastid	77.53	77.19
VIT_08s0058g00260.t01	Wine grape	cytosol	71.72	70.14
KRH76003	Soybean	cytosol	71.08	69.29
CDY14376	Canola	cytosol	4.52	68.85
Os03t0294700-01	Rice	cytosol	39.35	68.16
KRH65637	Soybean	cytosol	70.22	68.02
Solyc10g076450.1.1	Tomato	cytosol	68.28	66.91
PGSC0003DMT400068499	Potato	cytosol, plastid	67.53	66.88
PGSC0003DMT400041081	Potato	cytosol	66.77	65.58
GSMUA_Achr6P32850_001	Banana	mitochondrion, plastid	63.23	60.68
GSMUA_Achr8P01920_001	Banana	cytosol, mitochondrion, plastid	62.04	59.79
TraesCS4D01G193600.2	Wheat	cytosol, plastid	57.2	55.19
TraesCS4B01G192300.1	Wheat	cytosol, plastid	57.2	55.13
HORVU4Hr1G055900.5	Barley	cytosol, plastid	57.31	55.12
Zm00001d028769_P004	Maize	plastid	57.31	55.06
CDY32974	Canola	plastid	54.52	54.99
TraesCS4A01G111500.1	Wheat	cytosol, plastid	57.2	54.96
EER95025	Sorghum	plastid	56.88	54.76
CDY66209	Canola	plastid	54.09	54.38
Zm00001d047721_P001	Maize	plastid	56.56	54.17
CDY66290	Canola	cytosol, plastid	44.73	50.0
CDY18003	Canola	cytosol	44.52	49.76

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.5.1.3	Gene3D:3.30.710.10	InterPro:BTB/POZ_dom	EnsemblPlants:CDX90635	ProteinID:CDX90635
ProteinID:CDX90635.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00151279001
InterPro:IPR000210	InterPro:IPR011990	InterPro:IPR019734	PFAM:PF13181	PFscan:PS50005	PANTHER:PTHR44203
PANTHER:PTHR44203:SF3	InterPro:SKP1/BTB/POZ_sf	SMART:SM00028	SMART:SM00225	SUPFAM:SSF48452	SUPFAM:SSF54695
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0004EE5302	SEG:seg	:	:

Description

BnaA03g41460D

Coordinates

chrLK031863:+:1242874..1247096

Molecular Weight (calculated)

105190.0 Da

IEP (calculated)

6.556

GRAVY (calculated)

-0.283

Length

930 amino acids

Sequence
(BLAST)

001: MHHNPFTTMR SLKLAEGCKG TQVYALNPPP GGGVGDKLLQ HLQDHLRVNS IRSKSSRTYH QSSLLLPYGL PVTDLLEPQI DPSLRFPDLV EKMAEVYRRV
101: AASTSLERSG AFLEQCAVFR GLSDPKLFRR SLRSSRQHAV DVHAKVVLSS WLRFERREDE LIGTCSMDCC GRNLECPKAS LVPGYDPVTV YDPCRCSGSN
201: GVAECSTSDE AFAFAFEYDM SFCIGDEEVR CVRYKIASLS RPFEAMLYGG FRETKLGTIS FTQNGVSVEG MRAAEVFSRT KRLDEFPPHV VLDLLKLANR
301: FCCDELKSCC DTHLARLVST LDEAMVLIEY GLEESAYLLV AACLQVFLRE LPSSMHNPNV IKIFCSVEGR ERLASLGHAS FALYFFLSQI AMEDDMKSNT
401: TVMILERLVE CAVESWEKQL AYHQLGVVML ERKEYKDAQR AFNTAVEAGH LYSLVGVARS KFKRDHRYSA YKIINSLISD HKAATGWMHQ ERSLYCSGKE
501: KLLDLDTATE LDPTLTFPYK FRAVALVEEN QFNAAISELN KVLGFKASTD CLEMRAWVSI GKEDYEGALK DIRALLTLEP NFMMFNGKIH GDHMVELLRP
601: LAHQRSQADC WMQLFDHWSS VDDIGSLAVV HDMLAHDPGN SLLRFRQSLL LLRLNCQKAA MRSLRLARNH SKLKHERLVY EGWILYDTGH REEALAKAEE
701: SISIQRSFEV FFLKAYALAD STLDPKSSEY VIQLLEEALR CPSDALRKGQ ALNNLGSVYV DCDKLDLAAD CYTNALNIKH TRAHQGLARV YHLKNQRKAA
801: YDEMTKLIEK AQNNASAYEK RSEYCDREMA QSDLSLATEL DPLRTYPYRY RAAVLMDDHK ENEAIEELSK AISFKPDLQL LHLRAAFYDS MGEGASAIKD
901: CEAALCIDPS HADTLDLYHK ARETNATDQK

Best Arabidopsis Sequence Match ( AT3G51770.2 )
(BLAST)

001: MQHNLFTTMR SLKLAEGCKG TQVYALNPSA PTPPPPPGNS SSGGGGGGGS GGGTGGVGDK LLQHLSDHLR VNSVRSKSSR TYPPPTQPNA VVSPEFLLPC
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK

Arabidopsis Description

ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.