CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76003	Soybean	cytosol	91.56	92.14
VIT_08s0058g00260.t01	Wine grape	cytosol	73.12	73.82
CDX74897	Canola	plastid	68.12	71.79
CDX91443	Canola	cytosol, plastid	68.33	71.69
Bra005123.1-P	Field mustard	plastid	67.92	71.41
CDY29045	Canola	cytosol	69.48	71.34
AT3G51770.2	Thale cress	cytosol	71.04	71.12
Bra006875.1-P	Field mustard	cytosol	69.38	70.78
CDX73693	Canola	cytosol	69.38	70.63
CDX78038	Canola	cytosol	67.29	70.29
CDX90635	Canola	cytosol	68.02	70.22
Bra012838.1-P	Field mustard	cytosol	67.4	70.17
Os03t0294700-01	Rice	cytosol	39.06	69.83
CDY14472	Canola	cytosol	65.31	69.67
Bra000048.1-P	Field mustard	cytosol, plastid	66.88	68.74
CDY07743	Canola	cytosol, plastid	66.88	68.74
Solyc10g076450.1.1	Tomato	cytosol	67.71	68.49
PGSC0003DMT400068499	Potato	cytosol, plastid	66.77	68.26
PGSC0003DMT400041081	Potato	cytosol	66.98	67.9
GSMUA_Achr6P32850_001	Banana	mitochondrion, plastid	62.4	61.82
GSMUA_Achr8P01920_001	Banana	cytosol, mitochondrion, plastid	61.04	60.73
KRH72722	Soybean	cytosol, plastid	58.23	59.66
KRG98245	Soybean	plastid	57.19	58.91
KRH30203	Soybean	plastid	56.77	58.29
KRH17084	Soybean	plastid	57.71	58.01
TraesCS4D01G193600.2	Wheat	cytosol, plastid	56.67	56.43
TraesCS4A01G111500.1	Wheat	cytosol, plastid	56.67	56.2
HORVU4Hr1G055900.5	Barley	cytosol, plastid	56.46	56.05
TraesCS4B01G192300.1	Wheat	cytosol, plastid	56.25	55.96
Zm00001d028769_P004	Maize	plastid	56.04	55.58
EER95025	Sorghum	plastid	55.42	55.07
Zm00001d047721_P001	Maize	plastid	55.31	54.69
KRH71376	Soybean	cytosol	47.4	51.35
KRH67265	Soybean	cytosol	47.08	50.9
KRH32058	Soybean	cytosol	46.88	50.73
KRG95578	Soybean	cytosol	46.56	47.15

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100794758	MapMan:11.5.1.3	Gene3D:3.30.710.10	EMBL:ACUP02001443	ncoils:Coil
EnsemblPlantsGene:GLYMA_03G051300	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0016787	GO:GO:0042597	UniProt:I1JL91	InterPro:IPR011990
InterPro:IPR019734	EnsemblPlants:KRH65637	ProteinID:KRH65637	ProteinID:KRH65637.1	PFscan:PS50005	PANTHER:PTHR44203
PANTHER:PTHR44203:SF3	InterPro:SKP1/BTB/POZ_sf	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54695	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_repeat	UniParc:UPI0002337399	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:6696350..6701779

Molecular Weight (calculated)

108354.0 Da

IEP (calculated)

5.789

GRAVY (calculated)

-0.256

Length

960 amino acids

Sequence
(BLAST)

001: MQHKIFATMR SLKIMDGCKG TQVYAINPSG AGGADGPTGG GIGEKLLQQL HDHIKGQTLR TKSVRNLQAT NHTTPSEVVL SDGSLLPYGL SMTDLLEPKI
101: EPSLMSVDFV ETLAGVHRRT GDCPQFDRSE VYLEQCAVFQ GLADPKLFRR SLRAARQHAV HVHAKVVLAA WLRHERREDE LIGSSSSDCS GRNLECPRAT
201: LTPGYDPESV FDSCACTRAH AGNRDIDDDA MTIVVDEQCS TSEEEEEEDG DMSFFVGDDE IKCNRFNIAS LSRPFKTMLY GGFVESLKEK INFSGNCFSV
301: EALRAADVFS RTKRLSHLEP RVVLELLSLA NRFCCDEMKN ACDVHLASLV CDIDDALLLV EYGLEETAYL LVAACLQVFL RELPGSLQSS SVVKMFCSPE
401: GRDRLALAGH VSFVLYYFLS QIAMEEEMRS NTTVMLLERL VECATDGWEK QIAFHLLGVV MLERKEYKDA QHWFQAAVDA GHVYSLVGVA RAKYKRGHTY
501: SAYKLMNSLI SDHKPVGWMY QERSLYCVGK EKLMDLMSAT ELDPTLSFPY KFRAVSFLQE NKIGPAIAEI NKIIGFRVSP DCLELRAWFL IAMEDYEGAL
601: RDVRAILTLD PNYMMFYGHM HGDQLVELLQ PAVQQWSQAD CWMQLYDRWS SVDDIGSLAV VHQMLANDPG KSLLHFRQSL LLLRLNCPKS AMRSLRLARN
701: YSTSDHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AYFLKAYALA DSNLDSESSK YVISLLEEAL RCPSDGLRKG QALNNLGSVY VDCDKLDLAA
801: DCYMNALNIK HTRAHQGLAR VYHLKNHRKA AYDEMTKLIE KARGNASAYE KRSEYCDRDM AKSDLGMASQ LDPLRTYPYR YRAAVLMDDH KEVEAIEELS
901: RAIDFKPDLQ LLHLRAAFYD SIGDFVFAVR DCEAALCLDP NHNEILDLCN KAREHIREPK

Best Arabidopsis Sequence Match ( AT3G51770.2 )
(BLAST)

001: MQHNLFTTMR SLKLAEGCKG TQVYALNPSA PTPPPPPGNS SSGGGGGGGS GGGTGGVGDK LLQHLSDHLR VNSVRSKSSR TYPPPTQPNA VVSPEFLLPC
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK

Arabidopsis Description

ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.