CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH04373
KRH28319
KRH58165
KRH77167

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58550.1	KRH04373	AT5G65800.1	15118728
AT5G58550.1	KRH28319	AT5G65800.1	15118728
AT5G58550.1	KRH58165	AT5G65800.1	15118728
AT5G58550.1	KRH77167	AT5G65800.1	15118728

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98245	Soybean	plastid	93.05	93.35
KRH72722	Soybean	cytosol, plastid	76.79	76.63
Bra022691.1-P	Field mustard	cytosol	4.92	75.41
CDY14376	Canola	cytosol	4.92	75.41
KRH17084	Soybean	plastid	75.83	74.24
PGSC0003DMT400051035	Potato	cytosol, mitochondrion, nucleus	5.45	71.83
VIT_06s0004g07020.t01	Wine grape	cytosol	67.38	67.96
Solyc09g055310.2.1	Tomato	cytosol	60.53	62.2
Os03t0294700-01	Rice	cytosol	35.62	62.01
CDY32974	Canola	plastid	57.43	58.24
CDY66209	Canola	plastid	57.11	57.73
KRH76003	Soybean	cytosol	58.72	57.55
AT5G58550.1	Thale cress	cytosol, mitochondrion, plastid	56.9	57.51
Bra002638.1-P	Field mustard	plastid	56.68	57.48
KRH65637	Soybean	cytosol	58.29	56.77
GSMUA_Achr6P32850_001	Banana	mitochondrion, plastid	56.26	54.28
GSMUA_Achr8P01920_001	Banana	cytosol, mitochondrion, plastid	55.29	53.58
TraesCS4B01G192300.1	Wheat	cytosol, plastid	52.41	50.78
TraesCS4D01G193600.2	Wheat	cytosol, plastid	52.09	50.52
HORVU4Hr1G055900.5	Barley	cytosol, plastid	51.98	50.26
Zm00001d028769_P004	Maize	plastid	51.98	50.21
TraesCS4A01G111500.1	Wheat	cytosol, plastid	51.87	50.1
EER95025	Sorghum	plastid	51.44	49.79
Zm00001d047721_P001	Maize	plastid	50.91	49.02
KRH71376	Soybean	cytosol	45.56	48.08
KRH32058	Soybean	cytosol	45.35	47.8
KRH67265	Soybean	cytosol	45.24	47.64
KRG95578	Soybean	cytosol	45.13	44.51

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100800616	MapMan:11.5.1.3	Gene3D:3.30.710.10	EMBL:ACUP02006899	InterPro:BTB/POZ_dom
ncoils:Coil	EnsemblPlantsGene:GLYMA_11G167200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1LLQ0
InterPro:IPR000210	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	EnsemblPlants:KRH30203	ProteinID:KRH30203
ProteinID:KRH30203.1	PFAM:PF13181	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR44203	PANTHER:PTHR44203:SF1
InterPro:SKP1/BTB/POZ_sf	SMART:SM00028	SMART:SM00225	SUPFAM:SSF48452	SUPFAM:SSF54695	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI00023CC108	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr11:-:16317737..16322178

Molecular Weight (calculated)

106163.0 Da

IEP (calculated)

6.781

GRAVY (calculated)

-0.311

Length

935 amino acids

Sequence
(BLAST)

001: MRGLKLTERF KSTQVHALSS SSSQTNGSNS RKASVAATTK PHNNLNRNKT MLPSWSKTKS RTTNNKNSTS SLANLAPLRL PSTDTIEPSI EPHLKPINLV
101: ETLSELYHRL ECCSQSNKAL MCVEQYSLLR GLGDQKILRR CLRTACQNAE DVLSKVVLSA WLRFERRDDE LVGVCSMDCG GFVLECPKKN LEHGLSPCSV
201: SDHCQCQKEP NQKTCTETES VCLLDEESDI LFCVGSEEIS CVRCRIASLS DPFNAMLYGG FAESKINKID FSGNGICPKG MRAVEFYSRN KRLDLFCPMT
301: VLELLSFANR FCCEDMKSAC DAHLASIVVN VEDALVLIEY GLEERATLLV GACLQVLLRE LPNSLYNPKV AKIFCSFEVK ERLANVGCAS FLLYYFLSQV
401: AIEENMVSKT TMMLVERMGE CATERWQKAL AFHQLGCVLL ERNEYVEAQH CFEAALEEGH VYSLAGVART KHKQGQPYSA YKLISSLIFE YKPEGWMYQE
501: RALYNMGKEK SFDLDVATEL DPSLSFPYKY RALAKVEEKQ IKEGIIELDR FIGFKPSPDC LELRAWLYVA LEDYDSAMRD IRALLTIEPN YITSHGKIKG
601: EYLLQLLNCE VQQKCQADCW MQLYQQWSCV DDIGSLAIIH QMLENEPGKS VLEFRQSLLL LRLNYQKAAM RSLRLARNHS SPMQERLIYE GWILYDTGYR
701: EEAVARADRS IAIQRSFEAF FLKAYVLADT TLDPESSSYV IQLLKEALKC PSDGLRKGQA LNNLGSIYVD CGKLELAKEC YKNALAIRHT RAHQGLARVY
801: HQKNQRKAAY DEMTKLIEKA ESNASAYEKR SEYCDREMAK ADLDVATQLD PLRTYPYRYR AAVMMDEQKE TEAVEELTKA IKFKPDLQML HLRAAFYEST
901: GDLSSALQDC QAALCLDPNH TGTLDVYRRI QKLNF

Best Arabidopsis Sequence Match ( AT5G58550.1 )
(BLAST)

001: MRNLKLFERF KSTQVHAFTT QDSPSTSSNG SPRMMKFLGH PKSKSRSLLP HGFPTTDLLE PPLDSYLKPI DLVESLSNLY RRIESSSESE ASMLYLEQYA
101: VLRSLGDAKL LRRCLLNARR HAIDVPCKVV FSAWLRFFRR EHELVGVESM DCNGLASECP KTSLTHGCDL NVDDEGCECS TVCEDEFGSD DVKISKADEF
201: SGLDEVSDIS FCVGSEKAKC VRSRIAALSR PFEAMLYGSF VESTTSEIDF SENGISIEAM LALNIYSRIK RVDLFRVETV FELLQLASKF CCDDLKSECE
301: ARLAASVTDL DKALTFVEYA LEERTTLLLS ACLQVFLREL PQSLHNPKVM RFFCSSEAKE QLAFLGSECV FLLYYFLSQV GMEEKLTTDT MLILLERTRE
401: FARTNWQKAL SLHQMGCVLF ERKDYKAAQF HFRLASSLGH VYSLAGVSRT EYKQGKRYSA YRLMNFLISN HKPHGWMYQE RSLYNVGVEK LKDLATATEL
501: DPTLSFPYKY RAVMKFEQKQ IKEAFQEIDR LIQFKLSPEC LELRAWLYLA TGDRESCLRD LRAVLSLEPN YVVFGGKMRD DLVEALTAQC IEVESEADCW
601: VRLFDRWSAV DDVASLAVVH QMLQNDPSKN FLRFRQSLLL LRLNCQGAAM RCLRMAWNLA TSEAERLVYE GWLLYDMGYV EETLTKAEEA ISIQRSFEAF
701: FLKAYALADK NLDADEISCV VQVLEEALKC PSDGLRKGQA LNNLGSIYIN LGMLDQAETA YKNAIEIKHT RARQGLARVY FLKNQRKEAC EEMTKLIEKS
801: CSKAAAYEKR SEYCEREKAK EDLDMATTLD PLRTYPYRYR AAVLMDDQRE TEAVEELSKA IAFRPELQTL HLRAAFHEAT GNLSLATQDC EAALCLDPNH
901: TETLHLYSRS KDQASSIDNT IFGLD

Arabidopsis Description

EOL2ETO1-like 2 [Source:TAIR;Acc:AT5G58550]
SUBAcon: [cytosol,plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.