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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • cytosol 2
  • nucleus 1
  • plasma membrane 1
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400051035 Potato cytosol, mitochondrion, nucleus 5.72 74.65
Bra022691.1-P Field mustard cytosol 4.64 70.49
CDY14376 Canola cytosol 4.64 70.49
Solyc09g055310.2.1 Tomato cytosol 67.64 68.9
KRG98245 Soybean plastid 68.18 67.81
KRH30203 Soybean plastid 67.96 67.38
KRH72722 Soybean cytosol, plastid 67.21 66.49
VIT_08s0058g00260.t01 Wine grape cytosol 68.18 66.46
Os03t0294700-01 Rice cytosol 38.4 66.29
KRH17084 Soybean plastid 66.56 64.61
CDY32974 Canola plastid 58.25 58.57
GSMUA_Achr6P32850_001 Banana mitochondrion, plastid 61.06 58.41
AT5G58550.1 Thale cress cytosol, mitochondrion, plastid 58.25 58.38
CDY66209 Canola plastid 57.93 58.05
Bra002638.1-P Field mustard plastid 57.61 57.92
GSMUA_Achr8P01920_001 Banana cytosol, mitochondrion, plastid 59.44 57.1
Zm00001d028769_P004 Maize plastid 56.53 54.13
EER95025 Sorghum plastid 55.88 53.62
TraesCS4D01G193600.2 Wheat cytosol, plastid 55.56 53.42
TraesCS4B01G192300.1 Wheat cytosol, plastid 55.56 53.37
TraesCS4A01G111500.1 Wheat cytosol, plastid 55.66 53.31
HORVU4Hr1G055900.5 Barley cytosol, plastid 55.56 53.26
Zm00001d047721_P001 Maize plastid 55.45 52.94
VIT_00s0179g00100.t01 Wine grape cytosol 50.59 52.93
VIT_00s0233g00080.t01 Wine grape cytosol 12.84 49.79
VIT_18s0089g00540.t01 Wine grape cytosol 5.39 39.37
Protein Annotations
Gene3D:1.25.40.10EntrezGene:100256939wikigene:100256939MapMan:11.5.1.3Gene3D:3.30.710.10InterPro:BTB/POZ_dom
ProteinID:CCB43456ProteinID:CCB43456.1ncoils:CoilUniProt:F6GUM3EMBL:FN594951GO:GO:0003674
GO:GO:0005488GO:GO:0005515InterPro:IPR000210InterPro:IPR011990InterPro:IPR013026InterPro:IPR019734
EntrezGene:LOC100256939wikigene:LOC100256939PFAM:PF13181PFscan:PS50005PFscan:PS50293PANTHER:PTHR44203
PANTHER:PTHR44203:SF1InterPro:SKP1/BTB/POZ_sfSMART:SM00028SMART:SM00225SUPFAM:SSF48452SUPFAM:SSF54695
InterPro:TPR-contain_domInterPro:TPR-like_helical_dom_sfInterPro:TPR_repeatUniParc:UPI00019835ECArrayExpress:VIT_06s0004g07020EnsemblPlantsGene:VIT_06s0004g07020
EnsemblPlants:VIT_06s0004g07020.t01unigene:Vvi.21756RefSeq:XP_002278414RefSeq:XP_002278414.1SEG:seg:
Description
No Description!
Coordinates
chr6:+:7765480..7771216
Molecular Weight (calculated)
105485.0 Da
IEP (calculated)
6.410
GRAVY (calculated)
-0.238
Length
927 amino acids
Sequence
(BLAST)
001: MRSFKLIERY KSTQVHALTP PDANPSSTTS CAVTGKVNHH SKWLKLSQAI SASVAEPLLP YGLPTTELIE PPIDLHLKSV NHVETLASLY RRFQTCSQFD
101: KSLICLEQYS LLRSLGDPKL LRRCLWTARQ NVADIQSKVV LSAWLRYERR EDELSGSTSM ECGGHILECP KAAMVPGCDP KSFYDHCRCR LGTVDGTDKR
201: IIVGDDECST SNENSDVSFC IDDEEINCVR NKIAVLSGPF ETMLYGSFIE SKRVKIDFSE NGISVEGMRA VEVFSRTRRL DSFHPEIVLE MLSFANRFCC
301: EEMKSACDAY LASLVCNIGD ALILIDYGLE ETASLLVAAC LQVLLRELPS SLYNLKVVKI FCSIEAKERL AMVGHASFLL YYFLSQVAME ENMVSKTTVM
401: LLERMRECAT EKWQKALAFH QLGCVRLERK EYEDAECCFE AATEVGHVYS VAGVARAKYK QGHQYSSYEL MNSLISDYKS VGWMYQERSL YCSGRMKIFD
501: LNTATELDPT LSFPYKYRAV ALMEEKQIRA SITEIDKIIG FKVSPDCLEL RAWFFIALED YQSALRDIRA LLALEPNYSM FHGKVSADHL VELLSRRVQQ
601: WSQADCWMQL YNRWSCIDDI GSLAVIHQML VNDPHKSLLR FRQSLLLLRL NCQKAAMRSL RLARNHSSSE HERLVYEGWI SYDTGHREEA LSKAEESIAL
701: QRSFEAFFLK AYVLADTSLN PESSAYVIQL LEEALKCPSD GLRKGQALNN LGSIYVDCGK LDLAADCYMN ALDIKHTRAH QGLARVCHLK NQRKAAYNEM
801: TKLIDKARNN ASAYEKRSEY CDREMAMNDL SMATRLDPLR TYPYRYRAAV LMDDQKETEA VEELTKAIAF KPDLQMLHLR AAFYESMGNF VSAIQDCEAA
901: LCLDLNHTDT LDLYNRAQDQ ATHQQQK
Best Arabidopsis Sequence Match ( AT3G51770.2 )
(BLAST)
001: MQHNLFTTMR SLKLAEGCKG TQVYALNPSA PTPPPPPGNS SSGGGGGGGS GGGTGGVGDK LLQHLSDHLR VNSVRSKSSR TYPPPTQPNA VVSPEFLLPC
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK
Arabidopsis Description
ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.