Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 2
- nucleus 1
- plasma membrane 1
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
VIT_00s0840g00010.t01 | |
VIT_00s1437g00010.t01 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT5G58550.1 | VIT_00s0840g00010.t01 | AT5G65800.1 | 15118728 |
AT5G58550.1 | VIT_00s1437g00010.t01 | AT5G65800.1 | 15118728 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400051035 | Potato | cytosol, mitochondrion, nucleus | 5.72 | 74.65 |
Bra022691.1-P | Field mustard | cytosol | 4.64 | 70.49 |
CDY14376 | Canola | cytosol | 4.64 | 70.49 |
Solyc09g055310.2.1 | Tomato | cytosol | 67.64 | 68.9 |
KRG98245 | Soybean | plastid | 68.18 | 67.81 |
KRH30203 | Soybean | plastid | 67.96 | 67.38 |
KRH72722 | Soybean | cytosol, plastid | 67.21 | 66.49 |
VIT_08s0058g00260.t01 | Wine grape | cytosol | 68.18 | 66.46 |
Os03t0294700-01 | Rice | cytosol | 38.4 | 66.29 |
KRH17084 | Soybean | plastid | 66.56 | 64.61 |
CDY32974 | Canola | plastid | 58.25 | 58.57 |
GSMUA_Achr6P32850_001 | Banana | mitochondrion, plastid | 61.06 | 58.41 |
AT5G58550.1 | Thale cress | cytosol, mitochondrion, plastid | 58.25 | 58.38 |
CDY66209 | Canola | plastid | 57.93 | 58.05 |
Bra002638.1-P | Field mustard | plastid | 57.61 | 57.92 |
GSMUA_Achr8P01920_001 | Banana | cytosol, mitochondrion, plastid | 59.44 | 57.1 |
Zm00001d028769_P004 | Maize | plastid | 56.53 | 54.13 |
EER95025 | Sorghum | plastid | 55.88 | 53.62 |
TraesCS4D01G193600.2 | Wheat | cytosol, plastid | 55.56 | 53.42 |
TraesCS4B01G192300.1 | Wheat | cytosol, plastid | 55.56 | 53.37 |
TraesCS4A01G111500.1 | Wheat | cytosol, plastid | 55.66 | 53.31 |
HORVU4Hr1G055900.5 | Barley | cytosol, plastid | 55.56 | 53.26 |
Zm00001d047721_P001 | Maize | plastid | 55.45 | 52.94 |
VIT_00s0179g00100.t01 | Wine grape | cytosol | 50.59 | 52.93 |
VIT_00s0233g00080.t01 | Wine grape | cytosol | 12.84 | 49.79 |
VIT_18s0089g00540.t01 | Wine grape | cytosol | 5.39 | 39.37 |
Protein Annotations
Gene3D:1.25.40.10 | EntrezGene:100256939 | wikigene:100256939 | MapMan:11.5.1.3 | Gene3D:3.30.710.10 | InterPro:BTB/POZ_dom |
ProteinID:CCB43456 | ProteinID:CCB43456.1 | ncoils:Coil | UniProt:F6GUM3 | EMBL:FN594951 | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000210 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
EntrezGene:LOC100256939 | wikigene:LOC100256939 | PFAM:PF13181 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR44203 |
PANTHER:PTHR44203:SF1 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00028 | SMART:SM00225 | SUPFAM:SSF48452 | SUPFAM:SSF54695 |
InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI00019835EC | ArrayExpress:VIT_06s0004g07020 | EnsemblPlantsGene:VIT_06s0004g07020 |
EnsemblPlants:VIT_06s0004g07020.t01 | unigene:Vvi.21756 | RefSeq:XP_002278414 | RefSeq:XP_002278414.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr6:+:7765480..7771216
Molecular Weight (calculated)
105485.0 Da
IEP (calculated)
6.410
GRAVY (calculated)
-0.238
Length
927 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSFKLIERY KSTQVHALTP PDANPSSTTS CAVTGKVNHH SKWLKLSQAI SASVAEPLLP YGLPTTELIE PPIDLHLKSV NHVETLASLY RRFQTCSQFD
101: KSLICLEQYS LLRSLGDPKL LRRCLWTARQ NVADIQSKVV LSAWLRYERR EDELSGSTSM ECGGHILECP KAAMVPGCDP KSFYDHCRCR LGTVDGTDKR
201: IIVGDDECST SNENSDVSFC IDDEEINCVR NKIAVLSGPF ETMLYGSFIE SKRVKIDFSE NGISVEGMRA VEVFSRTRRL DSFHPEIVLE MLSFANRFCC
301: EEMKSACDAY LASLVCNIGD ALILIDYGLE ETASLLVAAC LQVLLRELPS SLYNLKVVKI FCSIEAKERL AMVGHASFLL YYFLSQVAME ENMVSKTTVM
401: LLERMRECAT EKWQKALAFH QLGCVRLERK EYEDAECCFE AATEVGHVYS VAGVARAKYK QGHQYSSYEL MNSLISDYKS VGWMYQERSL YCSGRMKIFD
501: LNTATELDPT LSFPYKYRAV ALMEEKQIRA SITEIDKIIG FKVSPDCLEL RAWFFIALED YQSALRDIRA LLALEPNYSM FHGKVSADHL VELLSRRVQQ
601: WSQADCWMQL YNRWSCIDDI GSLAVIHQML VNDPHKSLLR FRQSLLLLRL NCQKAAMRSL RLARNHSSSE HERLVYEGWI SYDTGHREEA LSKAEESIAL
701: QRSFEAFFLK AYVLADTSLN PESSAYVIQL LEEALKCPSD GLRKGQALNN LGSIYVDCGK LDLAADCYMN ALDIKHTRAH QGLARVCHLK NQRKAAYNEM
801: TKLIDKARNN ASAYEKRSEY CDREMAMNDL SMATRLDPLR TYPYRYRAAV LMDDQKETEA VEELTKAIAF KPDLQMLHLR AAFYESMGNF VSAIQDCEAA
901: LCLDLNHTDT LDLYNRAQDQ ATHQQQK
101: KSLICLEQYS LLRSLGDPKL LRRCLWTARQ NVADIQSKVV LSAWLRYERR EDELSGSTSM ECGGHILECP KAAMVPGCDP KSFYDHCRCR LGTVDGTDKR
201: IIVGDDECST SNENSDVSFC IDDEEINCVR NKIAVLSGPF ETMLYGSFIE SKRVKIDFSE NGISVEGMRA VEVFSRTRRL DSFHPEIVLE MLSFANRFCC
301: EEMKSACDAY LASLVCNIGD ALILIDYGLE ETASLLVAAC LQVLLRELPS SLYNLKVVKI FCSIEAKERL AMVGHASFLL YYFLSQVAME ENMVSKTTVM
401: LLERMRECAT EKWQKALAFH QLGCVRLERK EYEDAECCFE AATEVGHVYS VAGVARAKYK QGHQYSSYEL MNSLISDYKS VGWMYQERSL YCSGRMKIFD
501: LNTATELDPT LSFPYKYRAV ALMEEKQIRA SITEIDKIIG FKVSPDCLEL RAWFFIALED YQSALRDIRA LLALEPNYSM FHGKVSADHL VELLSRRVQQ
601: WSQADCWMQL YNRWSCIDDI GSLAVIHQML VNDPHKSLLR FRQSLLLLRL NCQKAAMRSL RLARNHSSSE HERLVYEGWI SYDTGHREEA LSKAEESIAL
701: QRSFEAFFLK AYVLADTSLN PESSAYVIQL LEEALKCPSD GLRKGQALNN LGSIYVDCGK LDLAADCYMN ALDIKHTRAH QGLARVCHLK NQRKAAYNEM
801: TKLIDKARNN ASAYEKRSEY CDREMAMNDL SMATRLDPLR TYPYRYRAAV LMDDQKETEA VEELTKAIAF KPDLQMLHLR AAFYESMGNF VSAIQDCEAA
901: LCLDLNHTDT LDLYNRAQDQ ATHQQQK
001: MQHNLFTTMR SLKLAEGCKG TQVYALNPSA PTPPPPPGNS SSGGGGGGGS GGGTGGVGDK LLQHLSDHLR VNSVRSKSSR TYPPPTQPNA VVSPEFLLPC
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK
Arabidopsis Description
ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.