Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU4Hr1G009800.5 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G58550.1 | HORVU4Hr1G009800.5 | AT5G65800.1 | 15118728 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G192300.1 | Wheat | cytosol, plastid | 92.66 | 92.85 |
| TraesCS4D01G193600.2 | Wheat | cytosol, plastid | 92.04 | 92.32 |
| TraesCS4A01G111500.1 | Wheat | cytosol, plastid | 92.14 | 92.05 |
| Os03t0294700-01 | Rice | cytosol | 45.6 | 82.12 |
| EER95025 | Sorghum | plastid | 76.32 | 76.4 |
| Zm00001d028769_P004 | Maize | plastid | 75.8 | 75.72 |
| Zm00001d047721_P001 | Maize | plastid | 75.08 | 74.77 |
| GSMUA_Achr6P32850_001 | Banana | mitochondrion, plastid | 65.77 | 65.63 |
| GSMUA_Achr8P01920_001 | Banana | cytosol, mitochondrion, plastid | 64.43 | 64.56 |
| CDY14376 | Canola | cytosol | 3.93 | 62.3 |
| Bra022691.1-P | Field mustard | cytosol | 3.93 | 62.3 |
| CDX78038 | Canola | cytosol | 55.33 | 58.22 |
| PGSC0003DMT400051035 | Potato | cytosol, mitochondrion, nucleus | 4.24 | 57.75 |
| CDY29045 | Canola | cytosol | 55.43 | 57.33 |
| CDX90635 | Canola | cytosol | 55.12 | 57.31 |
| VIT_08s0058g00260.t01 | Wine grape | cytosol | 56.36 | 57.31 |
| CDX91443 | Canola | cytosol, plastid | 54.19 | 57.27 |
| Bra006875.1-P | Field mustard | cytosol | 55.53 | 57.07 |
| AT3G51770.2 | Thale cress | cytosol | 56.46 | 56.93 |
| Bra012838.1-P | Field mustard | cytosol | 54.19 | 56.83 |
| CDX74897 | Canola | plastid | 53.36 | 56.64 |
| CDX73693 | Canola | cytosol | 55.22 | 56.63 |
| Bra005123.1-P | Field mustard | plastid | 53.36 | 56.52 |
| KRH76003 | Soybean | cytosol | 55.74 | 56.5 |
| KRH65637 | Soybean | cytosol | 56.05 | 56.46 |
| PGSC0003DMT400041081 | Potato | cytosol | 54.71 | 55.86 |
| PGSC0003DMT400068499 | Potato | cytosol, plastid | 54.19 | 55.8 |
| Solyc09g055310.2.1 | Tomato | cytosol | 52.43 | 55.71 |
| Solyc10g076450.1.1 | Tomato | cytosol | 54.6 | 55.64 |
| Bra000048.1-P | Field mustard | cytosol, plastid | 53.67 | 55.57 |
| CDY07743 | Canola | cytosol, plastid | 53.67 | 55.57 |
| VIT_06s0004g07020.t01 | Wine grape | cytosol | 53.26 | 55.56 |
| CDY14472 | Canola | cytosol | 51.6 | 55.44 |
| KRH72722 | Soybean | cytosol, plastid | 51.6 | 53.26 |
| KRG98245 | Soybean | plastid | 50.78 | 52.68 |
| KRH30203 | Soybean | plastid | 50.26 | 51.98 |
| KRH17084 | Soybean | plastid | 50.67 | 51.31 |
| CDY32974 | Canola | plastid | 47.88 | 50.22 |
| CDY66209 | Canola | plastid | 47.47 | 49.62 |
| Bra002638.1-P | Field mustard | plastid | 46.85 | 49.13 |
| AT5G58550.1 | Thale cress | cytosol, mitochondrion, plastid | 46.43 | 48.54 |
| HORVU2Hr1G119180.1 | Barley | cytosol | 43.12 | 46.96 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:11.5.1.3 | Gene3D:3.30.710.10 | UniProt:A0A287P537 | InterPro:BTB/POZ_dom | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:HORVU4Hr1G055900 | EnsemblPlants:HORVU4Hr1G055900.5 | InterPro:IPR000210 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | PFAM:PF13181 | PFscan:PS50005 | PFscan:PS50293 |
| PANTHER:PTHR44203 | PANTHER:PTHR44203:SF3 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00028 | SMART:SM00225 | SUPFAM:SSF48452 |
| SUPFAM:SSF54695 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI000B47C151 | SEG:seg |
Description
No Description!
Coordinates
chrchr4H:-:469811093..469815218
Molecular Weight (calculated)
107826.0 Da
IEP (calculated)
5.505
GRAVY (calculated)
-0.286
Length
967 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNNFLTTIR SLKLIEGCKA AQIYPFNSGA STSGGSGDGG GGAKLLPLPP PPPRSVSLMS ASLCYPHAPT TSGAFAPDST LPCGLPAAAA LEPALDACLR
101: PVDHVSALAA SFRRMSSAER QGDDLCDVYL EQHALFHALG DPRLLRRALR AARVHAADPH RRVVLAAWLR HERREDEFDP MPPPLDPCGP TTPLLECPRS
201: AVFAMESSGV DPVCPCRRPP PPPPRPRRLR RDAILRRNAS IAFDASEEED DDDETNDLWF VIGQEEVACE RSSIAALAKP LNTLLYGGFA EARRDHIDFS
301: RDGISARGMR AVAAYSRHGR LDDFPPDTIL ELLAFANKFC CDGLKVACDN KLASMVRGVD EALSLIDLAL EEAAHLLVAT CLQSFLRELP KSLSNPEVAR
401: LLCSPEGRER LDAAGNASFA LYYFLSYVAM EEDVRSNTTV MLLERLWECA ELPWHKQLAL HQLGCVMLER GEFKDAQEWF EEAVAEGHVY SLAGVARAKF
501: KCGHKYMAYK LMNRVVGDYD PAGWMYQERA MYCVGKEKMA DLRTATELDP TLTYPYKYRA AALLEEDKME RALEEIDKVL SFRMVTDCLE LRAWFYLVAG
601: DFEAAVQDVR AILTLDPTYM MFHGKMHGEQ LIELLRGHVQ QSDTADCWMQ LYDRWSGVDD IGSLAVVQKM LAREPGNSSL RFRQSLLLLR LNCQKAAMRS
701: LRLARNSSIH DHERLVYEGW ILYDTGHRDE ALEKAEESLR LQRSFEAFFL KAYALGDSSL DVESALNVVQ LLEHANSCAS DNLRKGQAYN NMGSIYVDCD
801: LLDEATECYS IALSIKHTRA HQGLARVHFL KNRKKAAFDE MTSLLKIAKN SASAYEKRSE YAERDAAKSD LNTATLLDPT RTYPYRYRAA VLMDENKEEE
901: AIGELTQALA FKPDLQLLHL RAAFLDSMGD SASTLRDCEA ALCMDPEHGD TLELYNKASA KAGQSER
101: PVDHVSALAA SFRRMSSAER QGDDLCDVYL EQHALFHALG DPRLLRRALR AARVHAADPH RRVVLAAWLR HERREDEFDP MPPPLDPCGP TTPLLECPRS
201: AVFAMESSGV DPVCPCRRPP PPPPRPRRLR RDAILRRNAS IAFDASEEED DDDETNDLWF VIGQEEVACE RSSIAALAKP LNTLLYGGFA EARRDHIDFS
301: RDGISARGMR AVAAYSRHGR LDDFPPDTIL ELLAFANKFC CDGLKVACDN KLASMVRGVD EALSLIDLAL EEAAHLLVAT CLQSFLRELP KSLSNPEVAR
401: LLCSPEGRER LDAAGNASFA LYYFLSYVAM EEDVRSNTTV MLLERLWECA ELPWHKQLAL HQLGCVMLER GEFKDAQEWF EEAVAEGHVY SLAGVARAKF
501: KCGHKYMAYK LMNRVVGDYD PAGWMYQERA MYCVGKEKMA DLRTATELDP TLTYPYKYRA AALLEEDKME RALEEIDKVL SFRMVTDCLE LRAWFYLVAG
601: DFEAAVQDVR AILTLDPTYM MFHGKMHGEQ LIELLRGHVQ QSDTADCWMQ LYDRWSGVDD IGSLAVVQKM LAREPGNSSL RFRQSLLLLR LNCQKAAMRS
701: LRLARNSSIH DHERLVYEGW ILYDTGHRDE ALEKAEESLR LQRSFEAFFL KAYALGDSSL DVESALNVVQ LLEHANSCAS DNLRKGQAYN NMGSIYVDCD
801: LLDEATECYS IALSIKHTRA HQGLARVHFL KNRKKAAFDE MTSLLKIAKN SASAYEKRSE YAERDAAKSD LNTATLLDPT RTYPYRYRAA VLMDENKEEE
901: AIGELTQALA FKPDLQLLHL RAAFLDSMGD SASTLRDCEA ALCMDPEHGD TLELYNKASA KAGQSER
001: MQHNLFTTMR SLKLAEGCKG TQVYALNPSA PTPPPPPGNS SSGGGGGGGS GGGTGGVGDK LLQHLSDHLR VNSVRSKSSR TYPPPTQPNA VVSPEFLLPC
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK
Arabidopsis Description
ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.