Factsheet for PGSC0003DMT400041081

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g076450.1.1	Tomato	cytosol	93.66	93.47
PGSC0003DMT400068499	Potato	cytosol, plastid	81.31	82.0
VIT_08s0058g00260.t01	Wine grape	cytosol	72.86	72.56
KRH76003	Soybean	cytosol	68.85	68.34
AT3G51770.2	Thale cress	cytosol	68.53	67.67
Os03t0294700-01	Rice	cytosol	38.33	67.6
Bra012838.1-P	Field mustard	cytosol	65.47	67.25
Bra006875.1-P	Field mustard	cytosol	66.74	67.16
CDY14472	Canola	cytosol	63.67	67.0
KRH65637	Soybean	cytosol	67.9	66.98
CDY29045	Canola	cytosol	66.1	66.95
CDX78038	Canola	cytosol	64.84	66.81
CDX73693	Canola	cytosol	66.53	66.81
CDX91443	Canola	cytosol, plastid	64.52	66.78
CDX90635	Canola	cytosol	65.58	66.77
CDX74897	Canola	plastid	63.99	66.52
CDY07743	Canola	cytosol, plastid	65.26	66.17
Bra005123.1-P	Field mustard	plastid	63.78	66.16
Bra000048.1-P	Field mustard	cytosol, plastid	65.05	65.95
GSMUA_Achr6P32850_001	Banana	mitochondrion, plastid	60.4	59.03
GSMUA_Achr8P01920_001	Banana	cytosol, mitochondrion, plastid	58.39	57.31
PGSC0003DMT400051035	Potato	cytosol, mitochondrion, nucleus	4.22	56.34
TraesCS4D01G193600.2	Wheat	cytosol, plastid	55.97	54.98
TraesCS4A01G111500.1	Wheat	cytosol, plastid	56.18	54.96
TraesCS4B01G192300.1	Wheat	cytosol, plastid	55.97	54.92
HORVU4Hr1G055900.5	Barley	cytosol, plastid	55.86	54.71
Zm00001d028769_P004	Maize	plastid	54.59	53.41
EER95025	Sorghum	plastid	54.28	53.21
Zm00001d047721_P001	Maize	plastid	53.85	52.52
PGSC0003DMT400049804	Potato	cytosol	46.25	49.44

Protein Annotations

EnsemblPlants:PGSC0003DMT400041081	EnsemblPlantsGene:PGSC0003DMG400015898	Gene3D:1.25.40.10	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR011990	InterPro:IPR019734	InterPro:SKP1/BTB/POZ_sf	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
ncoils:Coil	PANTHER:PTHR44203	PANTHER:PTHR44203:SF3	PGSC:PGSC0003DMG400015898	SEG:seg	SMART:SM00028
SUPFAM:SSF48452	SUPFAM:SSF54695	UniParc:UPI0002957B54	UniProt:M1BAW3	MapMan:11.5.1.3	:

Description

Ethylene-overproduction protein 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400015898]

Coordinates

chr10:-:49687923..49692818

Molecular Weight (calculated)

107698.0 Da

IEP (calculated)

5.865

GRAVY (calculated)

-0.361

Length

947 amino acids

Sequence
(BLAST)

001: MRSLNMIEGC KGTQIYAFNQ SGKTTTNGYG GGGGVGEKFL QHLHERVSSV RSKSNRNYQA MQPKDNVKSA VLVEALASYG LPQTDFIEPQ IESYLKSVNF
101: VETLADVYRR MEGCSKFEIS GMYLEQCAIF KGLSDPKLFR KCLKSGREHA VDVHSKVVLS AWLRFDRRED ELIGVSAMDC CGRSIECPRS SLVSGYNPEL
201: ATDPCLCHQR PVQDEDTEVY IGDEECSTSI SHDYEEEDYD MSFCMGEEEI RCRRFNMASL SRPFEVMLYD GFMESRREKI NFSQNGISAN GMKAAEMFSR
301: TKSVESFDPD TVLELLSLAN KFCCNEMKSA CDAYLASLVF DMDSAMLLIE YGLEETAYVL VAACLQVLLR ELPNSMHNPN VSRLFCSSEG KDRLASAGHA
401: SFLLYYFLTR TAMEEDMKSN TTVMLLERLG EFSSIGWQKQ LAFHQLGCVM LERKEYKDAQ KWFEAAVEAG HVYSLAGIAR AKYKRGHMYK AYKLMNSVIS
501: DCTPSGWMYQ ERSLYCHGKE KMMDLSTATE LDPTLSYPYK FRAMSMVEEN RTEAAISEID KIIGFKVSPD CLELRAWFLI ALEDYEGALR DVRALLTLDP
601: QYVMFHGKLQ GDKLVELLRH TVQQRNQADC WMQLYDRWSS VDDIGSLGVV HHMLANDPGK SLLLFRQSLL LLRLNSHRAA MRSLREARNQ ATSEHERLVY
701: EGWILYDTGY REEAISKAEE SISIQRSFEA FFLKAYVLSE TNSDSESSLY VIQLLEEALR CPSDGLRKGQ ALSNLASIYV DVDKLDSAID CYVNALTIKH
801: TRAHQGLARV YHLKNQRKAA YDEMTKLIEK ASYNASAYEK RSEYCDRELA KSDLTMATKL DPLRTYPYRY KAAVLMDDHK ESEAISELTK VIAFKPDLHL
901: LHLRAAFHDS MNEPTSTIRD CAAALCLDSS HADTLELYSK ARQRSNE

Best Arabidopsis Sequence Match ( AT3G51770.2 )
(BLAST)

001: MQHNLFTTMR SLKLAEGCKG TQVYALNPSA PTPPPPPGNS SSGGGGGGGS GGGTGGVGDK LLQHLSDHLR VNSVRSKSSR TYPPPTQPNA VVSPEFLLPC
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK

Arabidopsis Description

ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.