CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000048.1-P	Field mustard	cytosol, plastid	99.79	99.79
CDY14472	Canola	cytosol	91.11	94.56
CDX91443	Canola	cytosol, plastid	81.69	83.39
CDX74897	Canola	plastid	81.16	83.21
CDY29045	Canola	cytosol	78.05	77.97
CDX78038	Canola	cytosol	76.45	77.69
CDX90635	Canola	cytosol	77.19	77.53
CDX73693	Canola	cytosol	77.94	77.2
VIT_08s0058g00260.t01	Wine grape	cytosol	70.24	68.98
KRH76003	Soybean	cytosol	69.59	68.13
CDY14376	Canola	cytosol	4.39	67.21
KRH65637	Soybean	cytosol	68.74	66.88
Os03t0294700-01	Rice	cytosol	38.01	66.11
Solyc10g076450.1.1	Tomato	cytosol	66.92	65.86
PGSC0003DMT400041081	Potato	cytosol	66.17	65.26
PGSC0003DMT400068499	Potato	cytosol, plastid	65.42	65.07
GSMUA_Achr6P32850_001	Banana	mitochondrion, plastid	60.39	58.2
GSMUA_Achr8P01920_001	Banana	cytosol, mitochondrion, plastid	58.78	56.89
Zm00001d028769_P004	Maize	plastid	56.0	54.03
TraesCS4B01G192300.1	Wheat	cytosol, plastid	55.67	53.89
TraesCS4D01G193600.2	Wheat	cytosol, plastid	55.46	53.73
EER95025	Sorghum	plastid	55.57	53.73
TraesCS4A01G111500.1	Wheat	cytosol, plastid	55.67	53.72
HORVU4Hr1G055900.5	Barley	cytosol, plastid	55.57	53.67
CDY32974	Canola	plastid	52.78	53.47
Zm00001d047721_P001	Maize	plastid	55.25	53.14
CDY66209	Canola	plastid	52.57	53.08
CDY66290	Canola	cytosol, plastid	45.07	50.6
CDY18003	Canola	cytosol	44.86	50.36

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.5.1.3	Gene3D:3.30.710.10	UniProt:A0A078F7R0	EnsemblPlants:CDY07743	ProteinID:CDY07743
ProteinID:CDY07743.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00124869001
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	PFAM:PF13176	PFscan:PS50005	PFscan:PS50293
PANTHER:PTHR44203	PANTHER:PTHR44203:SF3	InterPro:SKP1/BTB/POZ_sf	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54695
SUPFAM:SSF81901	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0004EEABEE	SEG:seg

Description

BnaA03g17680DBnaA03g17680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7R0]

Coordinates

chrLK031980:-:723358..726762

Molecular Weight (calculated)

106268.0 Da

IEP (calculated)

7.198

GRAVY (calculated)

-0.269

Length

934 amino acids

Sequence
(BLAST)

001: MHPNLFTTMR TLKFIEGCKA TALNPPPPPP PPSTTERAGE KLFQHLHDHL RVNSFRSKST RTHPPPNQNA AVSKNSLLPY GLPNTDLLEP QIDPSLKFVD
101: LIDKLAEVYR RIENSSQFEK AEAFLEQCAI FKGLSDPKLF RRSLRSARQH AVNVHTKVVL ASWLRYERRE DELIGTTSMD CCGRNLECPK ASLVSGYDPE
201: RVYDPCICSG YNADVDVEEC STSEVDYDMS FCIGDEEVPC VRCKIASLSI PFKAMLYGGF RETKRNTINF TRNGISVEGM RAVEMFSRVR KVEMFPPNVV
301: LELLTLANQF CCDELKAACD VFLARLVSNF DDAVLLIEYG LEEAAYLLVA ACLQVFLREL PNSMRNPNVV KILCSVEGRE RLALVGHASF TLYLFLSQIA
401: MEDDMNSNTT VMVLECLVEH AVETWQRQLA CHQLGVVMLE RKEYKDAQRW FNSAAKAGHV YSLVGVARSK FKLGHRYSAY KTMNSLISGC SATGWMYQER
501: SLYRIGEEKV LDIDIATDLD PTLTFPYKFR AVSLVEESQF GAAVAELNKI LRFKVSPDCL EMRAWISIAM KNFEGALKDI RALLTLEPNF LMFNKKIHGD
601: HMVELLRSLV QRRNQADCWM QLYDRWSSVD DIGSLAVVHH MLANDPGKSL LRFRQSLLLL RLNCQKAAMR SLRLARNHSK SEHERLVYEG WILYDTGHRE
701: EALAKAEESV SIQRSFEAYF LKAYALADST LDPESSKYVI QLLEEALRCP SDGLRKGQAL NNLGSVYVDC GKLDLAADCY KNALTIKHTR AHQGLARVYH
801: LKSQRKDAYN EMTKLIEKAQ NNASAFEKRS EYCDREVAQR DLVMATQLDP LRTYPYRYRA AVLMDDHKEI EAIEELSKAI AFKPDLQLLH LRAAFFASMR
901: ETTDAIRDCE AALSIDPCHK DTINLYHKVR EPQA

Best Arabidopsis Sequence Match ( AT3G51770.2 )
(BLAST)

001: MQHNLFTTMR SLKLAEGCKG TQVYALNPSA PTPPPPPGNS SSGGGGGGGS GGGTGGVGDK LLQHLSDHLR VNSVRSKSSR TYPPPTQPNA VVSPEFLLPC
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK

Arabidopsis Description

ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.