Factsheet for PGSC0003DMT400068499

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 2
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400041081	Potato	cytosol	82.0	81.31
VIT_08s0058g00260.t01	Wine grape	cytosol	73.38	72.45
Os03t0294700-01	Rice	cytosol	38.98	68.16
KRH76003	Soybean	cytosol	69.22	68.13
Bra006875.1-P	Field mustard	cytosol	68.26	68.12
Bra012838.1-P	Field mustard	cytosol	66.88	68.11
CDY29045	Canola	cytosol	67.73	68.02
AT3G51770.2	Thale cress	cytosol	69.22	67.78
CDX91443	Canola	cytosol, plastid	65.81	67.54
CDX90635	Canola	cytosol	66.88	67.53
CDX78038	Canola	cytosol	66.03	67.46
CDY14472	Canola	cytosol	64.54	67.33
CDX73693	Canola	cytosol	67.52	67.23
CDX74897	Canola	plastid	64.86	66.85
KRH65637	Soybean	cytosol	68.26	66.77
Bra005123.1-P	Field mustard	plastid	64.86	66.7
Bra000048.1-P	Field mustard	cytosol, plastid	65.18	65.52
CDY07743	Canola	cytosol, plastid	65.07	65.42
PGSC0003DMT400051035	Potato	cytosol, mitochondrion, nucleus	4.69	61.97
GSMUA_Achr6P32850_001	Banana	mitochondrion, plastid	60.49	58.62
GSMUA_Achr8P01920_001	Banana	cytosol, mitochondrion, plastid	59.0	57.41
HORVU4Hr1G055900.5	Barley	cytosol, plastid	55.8	54.19
TraesCS4D01G193600.2	Wheat	cytosol, plastid	55.59	54.15
TraesCS4A01G111500.1	Wheat	cytosol, plastid	55.7	54.03
TraesCS4B01G192300.1	Wheat	cytosol, plastid	55.38	53.89
EER95025	Sorghum	plastid	54.95	53.42
Zm00001d028769_P004	Maize	plastid	55.06	53.41
Zm00001d047721_P001	Maize	plastid	54.63	52.83
PGSC0003DMT400049804	Potato	cytosol	45.58	48.31

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.5.1.3	Gene3D:3.30.710.10	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	UniProt:M1CJ53	PFAM:PF13181
EnsemblPlantsGene:PGSC0003DMG400026638	PGSC:PGSC0003DMG400026638	EnsemblPlants:PGSC0003DMT400068499	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR44203
PANTHER:PTHR44203:SF3	InterPro:SKP1/BTB/POZ_sf	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54695	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI00029606C4	SEG:seg	:	:

Description

Ethylene-overproduction protein 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400026638]

Coordinates

chr9:+:10230168..10236115

Molecular Weight (calculated)

106127.0 Da

IEP (calculated)

5.323

GRAVY (calculated)

-0.329

Length

939 amino acids

Sequence
(BLAST)

001: MEGCKGTQVY ALNPSGTTTT TNGFGGGGGV GEKFLQNLLA NPVRSRSDRN FPASQSKDEV NMGVLAEALA SYGLPKTDLL EPQIEFCLKP MNFVETLADV
101: YCRMEGCAQF GKSKMFLEQC AIFRGLPDPK LFRKCLLSAR LHAVDVHTKV VLSAWLRFER REDELIGVSA MDCCGRSMEC PGSALVTGYN PESATDPCMC
201: HRGEDTEINM DEECSTSSSR GNEEEDFDMS FCIGDDEVRC RRFNIASLSR PFEVLLYGSF MDSRREKINF SNNGISAEGM KAAEMFSRTK SVDSFNPDIV
301: LELLSLANKF CCDEMKSVCD AYLASLVFDM DSAMLLFEYG LEENAYLLVA ACLQVCLREL PNSMHNPNVS RLFCSSEGKD RLSYVGHASF LLYYFLSQAA
401: MEDDLKSNTT VMLLERMGEC ASEGWQKQLA FHQLGCVMLE RKEYKDAQKW FEAAVEAGHV YSLVGIARSK YKRGHMYKAY KLMDSLISDY TPSGWMYQER
501: SMYCQGKEKT MDLSTASELD PTLSYPYKYR AVSKVEENRL GPAISEINKV LGFKISPDCL ELRAWFLIVL EEYEGALRDV RALLTLDPHY MMFHGKLQGE
601: HLVELLSHNV QPCSQADCWM QLYDRWSSVD DIGSLAVVHH MLANDPGKSL LRFRQSLLLL RLNSHKAAMR SLREARNQAT SEHERLVYEG WILYDTGYRE
701: EAIAKAEESI SNQRSFEAFF LKAYVLSETS PDSESSLYVI QLLEEALRCP SDGLRKGQAL SNLASVYVDV DNLDNAIDCY TNALNIKHTR AHQGLARVYH
801: LKDQRKLAYD EMTKLIEKAK SNASAYEKRS EYCDREMAKS DLSMATKLDP LRTYPYRYKA AVLMDDHKEA EAIAELTKVI SFKPDLQLLH LRAAFHDSMG
901: DLTSAIRDCE AALCLDSSHT DTLDLYQKVQ QRVKEQPPT

Best Arabidopsis Sequence Match ( AT3G51770.2 )
(BLAST)

001: MQHNLFTTMR SLKLAEGCKG TQVYALNPSA PTPPPPPGNS SSGGGGGGGS GGGTGGVGDK LLQHLSDHLR VNSVRSKSSR TYPPPTQPNA VVSPEFLLPC
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK

Arabidopsis Description

ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.