Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07743 | Canola | cytosol, plastid | 94.56 | 91.11 |
| CDX91443 | Canola | cytosol, plastid | 81.78 | 80.44 |
| CDX74897 | Canola | plastid | 80.89 | 79.91 |
| CDY29045 | Canola | cytosol | 78.89 | 75.94 |
| CDX90635 | Canola | cytosol | 78.0 | 75.48 |
| CDX78038 | Canola | cytosol | 76.78 | 75.19 |
| CDX73693 | Canola | cytosol | 78.67 | 75.08 |
| CDY14376 | Canola | cytosol | 4.67 | 68.85 |
| VIT_08s0058g00260.t01 | Wine grape | cytosol | 70.89 | 67.09 |
| KRH76003 | Soybean | cytosol | 70.33 | 66.35 |
| Os03t0294700-01 | Rice | cytosol | 39.44 | 66.11 |
| KRH65637 | Soybean | cytosol | 69.67 | 65.31 |
| PGSC0003DMT400068499 | Potato | cytosol, plastid | 67.33 | 64.54 |
| Solyc10g076450.1.1 | Tomato | cytosol | 67.67 | 64.17 |
| PGSC0003DMT400041081 | Potato | cytosol | 67.0 | 63.67 |
| GSMUA_Achr6P32850_001 | Banana | mitochondrion, plastid | 62.0 | 57.59 |
| GSMUA_Achr8P01920_001 | Banana | cytosol, mitochondrion, plastid | 60.44 | 56.37 |
| CDY32974 | Canola | plastid | 54.33 | 53.04 |
| CDY66209 | Canola | plastid | 54.0 | 52.54 |
| Zm00001d028769_P004 | Maize | plastid | 56.33 | 52.38 |
| EER95025 | Sorghum | plastid | 56.0 | 52.17 |
| TraesCS4B01G192300.1 | Wheat | cytosol, plastid | 55.56 | 51.81 |
| HORVU4Hr1G055900.5 | Barley | cytosol, plastid | 55.44 | 51.6 |
| TraesCS4A01G111500.1 | Wheat | cytosol, plastid | 55.44 | 51.55 |
| Zm00001d047721_P001 | Maize | plastid | 55.56 | 51.49 |
| TraesCS4D01G193600.2 | Wheat | cytosol, plastid | 55.11 | 51.45 |
| CDY66290 | Canola | cytosol, plastid | 46.0 | 49.76 |
| CDY18003 | Canola | cytosol | 45.78 | 49.52 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:11.5.1.3 | Gene3D:3.30.710.10 | UniProt:A0A078FNM7 | EnsemblPlants:CDY14472 | ProteinID:CDY14472 |
| ProteinID:CDY14472.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00079155001 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | PFAM:PF13176 | PFscan:PS50005 | PFscan:PS50293 |
| PANTHER:PTHR44203 | PANTHER:PTHR44203:SF3 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF54695 |
| InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI0004EDFDC6 | SEG:seg | : |
Description
BnaC03g21230DBnaC03g21230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNM7]
Coordinates
chrLK032043:-:539476..542811
Molecular Weight (calculated)
102600.0 Da
IEP (calculated)
7.000
GRAVY (calculated)
-0.259
Length
900 amino acids
Sequence
(BLAST)
(BLAST)
001: MHPNLFTTMR TAGEKLFQNL QDHLRVNSFR SKSNRTHPPK DSLLPYGLPN TDLLEPQIDP SLKFVDLIDK LAQVYRSIEN CSQFEKADAF LEQCAIFRGL
101: SDPKLFRRSL RSARQHAVNV HTKVVLASWL RYERREDELI GTTSMDCCGR NLECPKASLV SGYDPERVYD PCICSGYNGD VDVEECSTSE VDYDMSFCIG
201: DDEVPCVRRK IASLSIPFKA MLYAGFRETK RSTINFTRNG ISVEGMRAAE MFTRVRKVEM FPPNVVLELL TLANQFCCDE LKAACDMFLA RLVSNLDDAV
301: LLIEYGLEEA AYLLVAACLQ VFLRELPNSI HNPNVVKILC SAEGRERLAL VGHASFTLYL FLSQIAMEDD MKSNTTVMVL ECLVECAVET WQKQLACHQL
401: GVVMLERKEY KDAQRWFNSA AKAGHVYSLV GVARSKFKLG HRYSAYKTMS SLISGCSATG WMYQERSLYR IGEEKVLDID IATDLDPTLT FPYKFRAVSL
501: VEESQFGAAV AELNKILRFK VSPDCLEMRA WISIAMKNYE GALKDIRALL TLEPNFLMFN KQIHGDHMVE LLRPLVQRRN QADCWMQLYD RWSSVDDIGS
601: LAVVHHMLAN DPGKSLLRFR QSLLLLRLNC QKAAMRSLRL ARNHSKSEHE RLVYEGWILY DTGHREEALA KAEESVSIQR SFEAYFLKAY ALADSTLDPE
701: SSKYVIQLLE EALRCPSDGL RKGQALNNLG SVYVDCGKLD LAADFYKNAL TIKHTRAHQG LARVYHLKSQ RKDAYNEMTK LIEKAQNNAS AFEKRSEYCD
801: REVAQRDLVM ATQLDPLRTY PYRYRAAVLM DDHKETEAIE ELSKAIAFKP DLQLLHLRAA FFASMRETTD AIRDCEAALS LDPCHKDTIN LYHKVREPQA
101: SDPKLFRRSL RSARQHAVNV HTKVVLASWL RYERREDELI GTTSMDCCGR NLECPKASLV SGYDPERVYD PCICSGYNGD VDVEECSTSE VDYDMSFCIG
201: DDEVPCVRRK IASLSIPFKA MLYAGFRETK RSTINFTRNG ISVEGMRAAE MFTRVRKVEM FPPNVVLELL TLANQFCCDE LKAACDMFLA RLVSNLDDAV
301: LLIEYGLEEA AYLLVAACLQ VFLRELPNSI HNPNVVKILC SAEGRERLAL VGHASFTLYL FLSQIAMEDD MKSNTTVMVL ECLVECAVET WQKQLACHQL
401: GVVMLERKEY KDAQRWFNSA AKAGHVYSLV GVARSKFKLG HRYSAYKTMS SLISGCSATG WMYQERSLYR IGEEKVLDID IATDLDPTLT FPYKFRAVSL
501: VEESQFGAAV AELNKILRFK VSPDCLEMRA WISIAMKNYE GALKDIRALL TLEPNFLMFN KQIHGDHMVE LLRPLVQRRN QADCWMQLYD RWSSVDDIGS
601: LAVVHHMLAN DPGKSLLRFR QSLLLLRLNC QKAAMRSLRL ARNHSKSEHE RLVYEGWILY DTGHREEALA KAEESVSIQR SFEAYFLKAY ALADSTLDPE
701: SSKYVIQLLE EALRCPSDGL RKGQALNNLG SVYVDCGKLD LAADFYKNAL TIKHTRAHQG LARVYHLKSQ RKDAYNEMTK LIEKAQNNAS AFEKRSEYCD
801: REVAQRDLVM ATQLDPLRTY PYRYRAAVLM DDHKETEAIE ELSKAIAFKP DLQLLHLRAA FFASMRETTD AIRDCEAALS LDPCHKDTIN LYHKVREPQA
001: MRSLKLAEGC KGTQVYALNP SAPTPPPPPG NSSSGGGGGG GSGGGTGGVG DKLLQHLSDH LRVNSVRSKS SRTYPPPTQP NAVVSPEFLL PCGLPVTDLL
101: EPQIDPCLKF VDLVEKMAQV YRRIENCSQF EKSGAYLEQC AIFRGISDPK LFRRSLRSSR QHAVDVHAKV VLASWLRFER REDELIGTTS MDCCGRNLEC
201: PKATLVSGYD PESVYDPCVC SGASRSEMMN EDECSTSQEV DYDMSFCIGD EEVRCVRYKI ASLSRPFKAM LYGGFREMKR ATINFTQNGI SVEGMRAAEI
301: FSRTNRLDNF PPNVVLELLK LANRFCCDEL KSACDSHLAH LVNSLDEAML LIEYGLEEAA YLLVAACLQV FLRELPSSMH NPNVIKIFCS AEGRERLASL
401: GHASFTLYFF LSQIAMEDDM KSNTTVMLLE RLVECAVDSW EKQLAYHQLG VVMLERKEYK DAQRWFNAAV EAGHLYSLVG VARTKFKRDH RYSAYKIINS
501: LISDHKATGW MHQERSLYCS GKEKLLDLDT ATEFDPTLTF PYKFRAVALV EENQFGAAIA ELNKILGFKA SPDCLEMRAW ISIGMEDYEG ALKDIRALLT
601: LEPNFMMFNW KIHGDHMVEL LRPLAQQWSQ ADCWMQLYDR WSSVDDIGSL AVVHHMLAND PGKSLLRFRQ SLLLLRLNCQ KAAMRSLRLA RNHSKSEHER
701: LVYEGWILYD TGHREEALAK AEESISIQRS FEAFFLKAYA LADSTLDPDS SNYVIQLLQE ALKCPSDGLR KGQALNNLGS VYVDCEKLDL AADCYTNALT
801: IKHTRAHQGL ARVYHLKNQR KAAYDEMTKL IEKAQNNASA YEKRSEYCDR EMAQSDLCLA TQLDPLRTYP YRYRAAVLMD DHKESEAIDE LSRAISFKPD
901: LQLLHLRAAF YDSMGEGASA IKDCEAALCI DPGHADTLEL YHKAREPNDQ K
101: EPQIDPCLKF VDLVEKMAQV YRRIENCSQF EKSGAYLEQC AIFRGISDPK LFRRSLRSSR QHAVDVHAKV VLASWLRFER REDELIGTTS MDCCGRNLEC
201: PKATLVSGYD PESVYDPCVC SGASRSEMMN EDECSTSQEV DYDMSFCIGD EEVRCVRYKI ASLSRPFKAM LYGGFREMKR ATINFTQNGI SVEGMRAAEI
301: FSRTNRLDNF PPNVVLELLK LANRFCCDEL KSACDSHLAH LVNSLDEAML LIEYGLEEAA YLLVAACLQV FLRELPSSMH NPNVIKIFCS AEGRERLASL
401: GHASFTLYFF LSQIAMEDDM KSNTTVMLLE RLVECAVDSW EKQLAYHQLG VVMLERKEYK DAQRWFNAAV EAGHLYSLVG VARTKFKRDH RYSAYKIINS
501: LISDHKATGW MHQERSLYCS GKEKLLDLDT ATEFDPTLTF PYKFRAVALV EENQFGAAIA ELNKILGFKA SPDCLEMRAW ISIGMEDYEG ALKDIRALLT
601: LEPNFMMFNW KIHGDHMVEL LRPLAQQWSQ ADCWMQLYDR WSSVDDIGSL AVVHHMLAND PGKSLLRFRQ SLLLLRLNCQ KAAMRSLRLA RNHSKSEHER
701: LVYEGWILYD TGHREEALAK AEESISIQRS FEAFFLKAYA LADSTLDPDS SNYVIQLLQE ALKCPSDGLR KGQALNNLGS VYVDCEKLDL AADCYTNALT
801: IKHTRAHQGL ARVYHLKNQR KAAYDEMTKL IEKAQNNASA YEKRSEYCDR EMAQSDLCLA TQLDPLRTYP YRYRAAVLMD DHKESEAIDE LSRAISFKPD
901: LQLLHLRAAF YDSMGEGASA IKDCEAALCI DPGHADTLEL YHKAREPNDQ K
Arabidopsis Description
ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.