Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS4A01G256500.1 | |
| TraesCS4B01G058200.1 | |
| TraesCS4D01G058200.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G58550.1 | TraesCS4A01G256500.1 | AT5G65800.1 | 15118728 |
| AT5G58550.1 | TraesCS4B01G058200.1 | AT5G65800.1 | 15118728 |
| AT5G58550.1 | TraesCS4D01G058200.1 | AT5G65800.1 | 15118728 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G192300.1 | Wheat | cytosol, plastid | 96.47 | 96.37 |
| TraesCS4A01G111500.1 | Wheat | cytosol, plastid | 95.95 | 95.56 |
| HORVU4Hr1G055900.5 | Barley | cytosol, plastid | 92.32 | 92.04 |
| Os03t0294700-01 | Rice | cytosol | 46.06 | 82.68 |
| EER95025 | Sorghum | plastid | 77.18 | 77.02 |
| Zm00001d028769_P004 | Maize | plastid | 76.56 | 76.24 |
| Zm00001d047721_P001 | Maize | plastid | 75.73 | 75.18 |
| GSMUA_Achr6P32850_001 | Banana | mitochondrion, plastid | 65.66 | 65.33 |
| GSMUA_Achr8P01920_001 | Banana | cytosol, mitochondrion, plastid | 65.04 | 64.97 |
| CDY14376 | Canola | cytosol | 4.05 | 63.93 |
| Bra022691.1-P | Field mustard | cytosol | 4.05 | 63.93 |
| CDX78038 | Canola | cytosol | 55.39 | 58.11 |
| CDX90635 | Canola | cytosol | 55.19 | 57.2 |
| VIT_08s0058g00260.t01 | Wine grape | cytosol | 56.33 | 57.1 |
| CDY29045 | Canola | cytosol | 55.29 | 57.01 |
| Bra006875.1-P | Field mustard | cytosol | 55.6 | 56.96 |
| CDX91443 | Canola | cytosol, plastid | 54.05 | 56.94 |
| KRH65637 | Soybean | cytosol | 56.43 | 56.67 |
| CDX74897 | Canola | plastid | 53.53 | 56.64 |
| Bra012838.1-P | Field mustard | cytosol | 54.15 | 56.62 |
| KRH76003 | Soybean | cytosol | 56.02 | 56.6 |
| CDX73693 | Canola | cytosol | 55.29 | 56.52 |
| AT3G51770.2 | Thale cress | cytosol | 56.22 | 56.52 |
| Bra005123.1-P | Field mustard | plastid | 53.53 | 56.52 |
| PGSC0003DMT400051035 | Potato | cytosol, mitochondrion, nucleus | 4.15 | 56.34 |
| Solyc10g076450.1.1 | Tomato | cytosol | 55.19 | 56.06 |
| PGSC0003DMT400041081 | Potato | cytosol | 54.98 | 55.97 |
| PGSC0003DMT400068499 | Potato | cytosol, plastid | 54.15 | 55.59 |
| VIT_06s0004g07020.t01 | Wine grape | cytosol | 53.42 | 55.56 |
| Bra000048.1-P | Field mustard | cytosol, plastid | 53.73 | 55.46 |
| CDY07743 | Canola | cytosol, plastid | 53.73 | 55.46 |
| Solyc09g055310.2.1 | Tomato | cytosol | 52.18 | 55.27 |
| CDY14472 | Canola | cytosol | 51.45 | 55.11 |
| KRH72722 | Soybean | cytosol, plastid | 51.35 | 52.83 |
| KRG98245 | Soybean | plastid | 50.93 | 52.68 |
| KRH30203 | Soybean | plastid | 50.52 | 52.09 |
| KRH17084 | Soybean | plastid | 50.41 | 50.89 |
| CDY32974 | Canola | plastid | 48.03 | 50.22 |
| CDY66209 | Canola | plastid | 47.82 | 49.84 |
| Bra002638.1-P | Field mustard | plastid | 46.99 | 49.13 |
| AT5G58550.1 | Thale cress | cytosol, mitochondrion, plastid | 46.37 | 48.32 |
| TraesCS2D01G562900.1 | Wheat | cytosol | 42.74 | 46.4 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G193600.2 | EnsemblPlantsGene:TraesCS4D01G193600 | Gene3D:1.25.40.10 | Gene3D:3.30.710.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR011990 | InterPro:IPR019734 | InterPro:SKP1/BTB/POZ_sf | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat |
| PANTHER:PTHR44203 | PANTHER:PTHR44203:SF3 | PFAM:PF13181 | PFscan:PS50005 | SEG:seg | SMART:SM00028 |
| SUPFAM:SSF48452 | SUPFAM:SSF54695 | MapMan:11.5.1.3 | : | : | : |
Description
No Description!
Coordinates
chr4D:-:336843655..336847300
Molecular Weight (calculated)
107631.0 Da
IEP (calculated)
5.566
GRAVY (calculated)
-0.280
Length
964 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNNFLTTIR SLKLIEGCKA AQIYPFNSAA STSGGSGDGG GGAKLLPLPP PRSVSLMSAS LCYPHAPATS GAFSSESTLP CGLPAAAALE PALDACLRPV
101: DHVSALAASF RRMSSAETKG DDLCDVYLEQ HALFHALGDP RLLRRALRAA RVHATDSHRR VVLAAWLRHE RREDEFDPMP PPLDPCGPTT PLLECPRSAV
201: FATESSGVDP VCPCRRTPPP PPRPPRLRRD TILRRNASIA FDESEEEEED ETNDLWFVIG QEEVACERSC IAALAKPLNT LLYGGFAEAR RDHIDFSRDG
301: ISARGMRAVA AYSRHGRLDD FPPDTMLELL AFANKFCCDG LKVACDNKLA SMVRGVDEAL SLIDLGLEEA AHLLVATCLQ AFLRELPKSL SHPEVARLLC
401: SPEGRERLDA AGNASFALYY FLSYVAMEED MRSNTTVMLL ERLWECAELP WHKQLALHQL GCVMLERGEF KDAQEWFEEA VAEGHVYSLA GVARAKFKCG
501: HKYMAYKLMN RVVTDYDPAG WMYQERAVYC VGKEKMADLR TATQLDPTLT YPYKYRAAAL LEEDKMERAL EEIDKVLSFR MATDCLELRA WFYLVAGDFE
601: AAVRDVRAIL TLDPTYMMFH GKMHGEQLIE LLRGQVQQRD MADCWLQLYD RWSGVDDIGS LAVVQQMLAR EPGNSSLRFR QSLLLLRLNC QKAAMRSLRL
701: ARNSSIHDHE RLVYEGWILY DTGHRDEALE KAEQSLSLQR SFEAFFLKAY ALGDSSLDVE SALSVVQLLE HANSCASDNL RKGQAYNNMG SIYVDCDLLD
801: EATECYSIAL SIKHTRAHQG LARVHFLKNR KKAAFDEMTS LLKIAKNSAS AYEKRSEYAE RDAAKSDLNM ATLLDPTRTY PYRYRAAVLM DENKEEEAIG
901: ELTQALAFKP DLQLLHLRAA FQDSMGDSAS TLRDCEAALC MHPEHGDTLE LYNKASAKAE QSES
101: DHVSALAASF RRMSSAETKG DDLCDVYLEQ HALFHALGDP RLLRRALRAA RVHATDSHRR VVLAAWLRHE RREDEFDPMP PPLDPCGPTT PLLECPRSAV
201: FATESSGVDP VCPCRRTPPP PPRPPRLRRD TILRRNASIA FDESEEEEED ETNDLWFVIG QEEVACERSC IAALAKPLNT LLYGGFAEAR RDHIDFSRDG
301: ISARGMRAVA AYSRHGRLDD FPPDTMLELL AFANKFCCDG LKVACDNKLA SMVRGVDEAL SLIDLGLEEA AHLLVATCLQ AFLRELPKSL SHPEVARLLC
401: SPEGRERLDA AGNASFALYY FLSYVAMEED MRSNTTVMLL ERLWECAELP WHKQLALHQL GCVMLERGEF KDAQEWFEEA VAEGHVYSLA GVARAKFKCG
501: HKYMAYKLMN RVVTDYDPAG WMYQERAVYC VGKEKMADLR TATQLDPTLT YPYKYRAAAL LEEDKMERAL EEIDKVLSFR MATDCLELRA WFYLVAGDFE
601: AAVRDVRAIL TLDPTYMMFH GKMHGEQLIE LLRGQVQQRD MADCWLQLYD RWSGVDDIGS LAVVQQMLAR EPGNSSLRFR QSLLLLRLNC QKAAMRSLRL
701: ARNSSIHDHE RLVYEGWILY DTGHRDEALE KAEQSLSLQR SFEAFFLKAY ALGDSSLDVE SALSVVQLLE HANSCASDNL RKGQAYNNMG SIYVDCDLLD
801: EATECYSIAL SIKHTRAHQG LARVHFLKNR KKAAFDEMTS LLKIAKNSAS AYEKRSEYAE RDAAKSDLNM ATLLDPTRTY PYRYRAAVLM DENKEEEAIG
901: ELTQALAFKP DLQLLHLRAA FQDSMGDSAS TLRDCEAALC MHPEHGDTLE LYNKASAKAE QSES
001: MQHNLFTTMR SLKLAEGCKG TQVYALNPSA PTPPPPPGNS SSGGGGGGGS GGGTGGVGDK LLQHLSDHLR VNSVRSKSSR TYPPPTQPNA VVSPEFLLPC
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK
Arabidopsis Description
ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.