Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- cytosol 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d033862_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G58550.1 | Zm00001d033862_P001 | AT5G65800.1 | 15118728 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER95025 | Sorghum | plastid | 92.67 | 92.86 |
| Zm00001d047721_P001 | Maize | plastid | 90.81 | 90.53 |
| Os03t0294700-01 | Rice | cytosol | 45.97 | 82.87 |
| TraesCS4D01G193600.2 | Wheat | cytosol, plastid | 76.24 | 76.56 |
| TraesCS4B01G192300.1 | Wheat | cytosol, plastid | 76.03 | 76.27 |
| HORVU4Hr1G055900.5 | Barley | cytosol, plastid | 75.72 | 75.8 |
| TraesCS4A01G111500.1 | Wheat | cytosol, plastid | 75.52 | 75.52 |
| Bra022691.1-P | Field mustard | cytosol | 4.24 | 67.21 |
| CDY14376 | Canola | cytosol | 4.24 | 67.21 |
| GSMUA_Achr6P32850_001 | Banana | mitochondrion, plastid | 63.33 | 63.26 |
| GSMUA_Achr8P01920_001 | Banana | cytosol, mitochondrion, plastid | 63.02 | 63.21 |
| PGSC0003DMT400051035 | Potato | cytosol, mitochondrion, nucleus | 4.34 | 59.15 |
| CDX90635 | Canola | cytosol | 55.06 | 57.31 |
| CDX91443 | Canola | cytosol, plastid | 54.13 | 57.27 |
| VIT_08s0058g00260.t01 | Wine grape | cytosol | 56.09 | 57.1 |
| CDX78038 | Canola | cytosol | 53.93 | 56.8 |
| AT3G51770.2 | Thale cress | cytosol | 56.2 | 56.73 |
| Bra012838.1-P | Field mustard | cytosol | 53.93 | 56.62 |
| CDY29045 | Canola | cytosol | 54.65 | 56.58 |
| CDX74897 | Canola | plastid | 53.2 | 56.53 |
| VIT_06s0004g07020.t01 | Wine grape | cytosol | 54.13 | 56.53 |
| Bra005123.1-P | Field mustard | plastid | 53.31 | 56.52 |
| CDY14472 | Canola | cytosol | 52.38 | 56.33 |
| KRH76003 | Soybean | cytosol | 55.48 | 56.29 |
| Bra006875.1-P | Field mustard | cytosol | 54.65 | 56.22 |
| KRH65637 | Soybean | cytosol | 55.58 | 56.04 |
| CDY07743 | Canola | cytosol, plastid | 54.03 | 56.0 |
| Bra000048.1-P | Field mustard | cytosol, plastid | 54.03 | 56.0 |
| CDX73693 | Canola | cytosol | 54.24 | 55.67 |
| Solyc09g055310.2.1 | Tomato | cytosol | 51.96 | 55.27 |
| PGSC0003DMT400068499 | Potato | cytosol, plastid | 53.41 | 55.06 |
| Solyc10g076450.1.1 | Tomato | cytosol | 53.82 | 54.9 |
| PGSC0003DMT400041081 | Potato | cytosol | 53.41 | 54.59 |
| KRH72722 | Soybean | cytosol, plastid | 51.14 | 52.83 |
| KRG98245 | Soybean | plastid | 50.41 | 52.36 |
| KRH30203 | Soybean | plastid | 50.21 | 51.98 |
| KRH17084 | Soybean | plastid | 50.1 | 50.79 |
| CDY32974 | Canola | plastid | 47.52 | 49.89 |
| CDY66209 | Canola | plastid | 47.0 | 49.19 |
| Bra002638.1-P | Field mustard | plastid | 46.28 | 48.59 |
| AT5G58550.1 | Thale cress | cytosol, mitochondrion, plastid | 46.38 | 48.54 |
| Zm00001d018939_P001 | Maize | cytosol | 43.91 | 47.86 |
| Zm00001d052974_P002 | Maize | cytosol, extracellular, nucleus | 43.8 | 46.75 |
| Zm00001d007522_P023 | Maize | cytosol | 41.01 | 44.06 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:103634507 | MapMan:11.5.1.3 | Gene3D:3.30.710.10 | UniProt:A0A1D6JZH5 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | ProteinID:ONL96993.1 |
| ProteinID:ONL96997.1 | PFAM:PF13176 | PFscan:PS50293 | PANTHER:PTHR44203 | PANTHER:PTHR44203:SF3 | InterPro:SKP1/BTB/POZ_sf |
| SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF54695 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat |
| UniParc:UPI000211E32F | EnsemblPlantsGene:Zm00001d028769 | EnsemblPlants:Zm00001d028769_P004 | EnsemblPlants:Zm00001d028769_T004 | SEG:seg | : |
Description
tetratricopeptide repeat (TPR)-containing protein
Coordinates
chr1:+:46006894..46011253
Molecular Weight (calculated)
107305.0 Da
IEP (calculated)
5.486
GRAVY (calculated)
-0.276
Length
968 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNNFLTTIK SLKLIEGCKA AQLYALSSVG AASTSGSGDA GGSSNGKPQP PPPPKTISMR SGSLYYPHAA PSTSGAFVPE PHLPCGLPVA DALEPALDAC
101: LRPVDHVGVL AASYRRVSAA TAGGDDDLCD AYLEQHALFQ SIGDARLIRR ALRAARVHAD NPHRRAVLAA WLRYERREDE LDPAPPPLAP CTATTPLLEC
201: PRAAVFASVS HSHSVDPVCP CRRPPLPPVT PPPHRLRRNT SGAASEMSEE EEPETNDLWF IIGEEEVACE RSCIAALSKP LNTLLYGGFA EAHRDRIDFS
301: RDGITPRGMR AVSAYSRHGR VDDFPPDVIS QLLAFANKFC CEGLKAACDN QLAAMVRGLD DARSLIDIGL EEASHLLVAS CLQAFLRELP KSLTCPDIAR
401: LLCSPEGRER LDISGNASFA LYHFLSYVAM EQDMRSNTTV MLLERLNEFA EQPWQKQLAL HQLGCVMLQR GEFEEAQEWF EAAVGEGHVY SVAGEARAKY
501: KRGHKYAAYK LMNSILGEYD EPAGWMYQER SLYCVGKEKL ADLQAATELD PTMTFPYKYR ACALLEEDNA ASAIAEISRV VGFKMATDCL ELRAWFYLAL
601: EQCELAVQDV RAILTLDPTY MMFHGRMHGE QLIELLRGQV QQWDMADCWM QLYGRWSAVD DIGSLAVVQQ MLSREPGNSS LRFRQSLLLL RLNCQKAAMR
701: SLRYARNSTL HEHERLVYEG WILYDSGHRD EALAKAEQSI GLQRSFEAFF LKAYALGDSS LDTESSLSVV QLLEHANSCA SDNLRKGQAY NNMGSIYVDC
801: DMLDEAAECY GIALNIKHTR AHQGLARVHY LKNRKKVAFE EMTKLVEIAS NCASAYEKRS EYGEREAARS DLNMATLLDP TRTYPYRYRA AVLMDEGKEE
901: EAIAELSGAI AFKPDLQLLH LRAAFFDSMG ERESALRDCE AALCLDPTHG DTLELYSKAS TTKAEPQS
101: LRPVDHVGVL AASYRRVSAA TAGGDDDLCD AYLEQHALFQ SIGDARLIRR ALRAARVHAD NPHRRAVLAA WLRYERREDE LDPAPPPLAP CTATTPLLEC
201: PRAAVFASVS HSHSVDPVCP CRRPPLPPVT PPPHRLRRNT SGAASEMSEE EEPETNDLWF IIGEEEVACE RSCIAALSKP LNTLLYGGFA EAHRDRIDFS
301: RDGITPRGMR AVSAYSRHGR VDDFPPDVIS QLLAFANKFC CEGLKAACDN QLAAMVRGLD DARSLIDIGL EEASHLLVAS CLQAFLRELP KSLTCPDIAR
401: LLCSPEGRER LDISGNASFA LYHFLSYVAM EQDMRSNTTV MLLERLNEFA EQPWQKQLAL HQLGCVMLQR GEFEEAQEWF EAAVGEGHVY SVAGEARAKY
501: KRGHKYAAYK LMNSILGEYD EPAGWMYQER SLYCVGKEKL ADLQAATELD PTMTFPYKYR ACALLEEDNA ASAIAEISRV VGFKMATDCL ELRAWFYLAL
601: EQCELAVQDV RAILTLDPTY MMFHGRMHGE QLIELLRGQV QQWDMADCWM QLYGRWSAVD DIGSLAVVQQ MLSREPGNSS LRFRQSLLLL RLNCQKAAMR
701: SLRYARNSTL HEHERLVYEG WILYDSGHRD EALAKAEQSI GLQRSFEAFF LKAYALGDSS LDTESSLSVV QLLEHANSCA SDNLRKGQAY NNMGSIYVDC
801: DMLDEAAECY GIALNIKHTR AHQGLARVHY LKNRKKVAFE EMTKLVEIAS NCASAYEKRS EYGEREAARS DLNMATLLDP TRTYPYRYRA AVLMDEGKEE
901: EAIAELSGAI AFKPDLQLLH LRAAFFDSMG ERESALRDCE AALCLDPTHG DTLELYSKAS TTKAEPQS
001: MQHNLFTTMR SLKLAEGCKG TQVYALNPSA PTPPPPPGNS SSGGGGGGGS GGGTGGVGDK LLQHLSDHLR VNSVRSKSSR TYPPPTQPNA VVSPEFLLPC
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK
Arabidopsis Description
ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.