Factsheet for Zm00001d033862_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002592_P002
Zm00001d005754_P001
Zm00001d007522_P023
Zm00001d018939_P001
Zm00001d020472_P001
Zm00001d020476_P001
Zm00001d026060_P003
Zm00001d028769_P004
Zm00001d033862_P001
Zm00001d039487_P001
Zm00001d047721_P001
Zm00001d052974_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G22810.1	Zm00001d005754_P001	AT1G80650.1	21798944
AT2G22810.1	Zm00001d020472_P001	AT1G80650.1	21798944
AT2G22810.1	Zm00001d020476_P001	AT1G80650.1	21798944
AT2G22810.1	Zm00001d033862_P001	AT2G22810.1	14983000
AT2G22810.1	Zm00001d002592_P002	AT4G11280.1	14983000
AT2G22810.1	Zm00001d026060_P003	AT4G11280.1	14983000
AT2G22810.1	Zm00001d039487_P001	AT4G26200.1	14983000
AT2G22810.1	Zm00001d033862_P001	AT4G37770.1	14983000
AT4G37770.1	Zm00001d033862_P001	AT2G22810.1	14983000
AT4G37770.1	Zm00001d033862_P001	AT4G37770.1	14983000
AT5G65800.1	Zm00001d007522_P023	AT4G02680.1	15118728
AT5G65800.1	Zm00001d018939_P001	AT4G02680.1	15118728
AT5G65800.1	Zm00001d052974_P002	AT4G02680.1	15118728
AT5G65800.1	Zm00001d028769_P004	AT5G58550.1	15118728
AT5G65800.1	Zm00001d047721_P001	AT5G58550.1	15118728

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90948	Sorghum	cytosol	93.4	91.15
TraesCS4A01G256500.1	Wheat	cytosol	82.06	82.06
TraesCS4B01G058200.1	Wheat	cytosol	82.06	82.06
TraesCS4D01G058200.1	Wheat	cytosol	82.06	82.06
Os03t0727600-01	Rice	cytosol	82.27	81.93
Solyc02g063540.1.1	Tomato	cytosol	41.86	71.48
CDY66472	Canola	cytosol	58.35	70.22
HORVU4Hr1G009800.5	Barley	cytosol, plastid	81.44	69.18
GSMUA_Achr1P14280_001	Banana	nucleus	65.15	69.15
GSMUA_Achr5P08880_001	Banana	cytosol	66.19	68.88
CDX75675	Canola	cytosol	63.51	68.29
GSMUA_Achr4P01340_001	Banana	mitochondrion	64.54	67.75
GSMUA_Achr3P25830_001	Banana	mitochondrion	62.68	67.71
PGSC0003DMT400008587	Potato	cytosol	63.92	67.25
GSMUA_Achr1P04420_001	Banana	cytosol	63.92	67.1
Bra010611.1-P	Field mustard	cytosol	64.74	66.95
CDY69462	Canola	cytosol	64.54	66.74
CDX69326	Canola	cytosol	64.12	66.31
Solyc02g091990.2.1	Tomato	cytosol	63.92	66.1
Bra011784.1-P	Field mustard	cytosol	63.92	66.1
AT4G37770.1	Thale cress	cytosol	63.92	66.1
GSMUA_Achr2P08600_001	Banana	cytosol	62.68	65.66
PGSC0003DMT400008605	Potato	cytosol	56.91	65.25
PGSC0003DMT400055203	Potato	cytosol	63.09	65.25
KRH04373	Soybean	cytosol	63.71	65.05
CDY23035	Canola	cytosol	62.27	64.81
VIT_00s0840g00010.t01	Wine grape	cytosol	62.47	64.61
VIT_00s1437g00010.t01	Wine grape	cytosol	62.47	64.61
Solyc03g043890.2.1	Tomato	cytosol	62.68	64.54
CDY02111	Canola	cytosol	62.47	64.47
Bra012924.1-P	Field mustard	cytosol	62.47	64.47
CDY08163	Canola	cytosol	62.27	64.26
CDY25639	Canola	cytosol	62.68	64.14
Bra030199.1-P	Field mustard	cytosol	62.68	64.14
AT3G49700.1	Thale cress	cytosol	62.06	64.04
CDY05953	Canola	cytosol	62.06	64.04
KRH77167	Soybean	cytosol	62.06	64.04
Bra017962.1-P	Field mustard	cytosol	61.86	63.83
KRH58165	Soybean	cytosol	63.09	63.75
KRH28319	Soybean	cytosol	61.86	63.69
AT5G65800.1	Thale cress	cytosol	61.65	63.62
AT2G22810.1	Thale cress	cytosol	62.06	63.5
Bra031846.1-P	Field mustard	cytosol	61.44	63.4
CDX81296	Canola	cytosol	57.11	63.1
Bra037829.1-P	Field mustard	cytosol	57.11	63.1
CDX89520	Canola	cytosol	61.65	63.08
CDY18674	Canola	cytosol	56.91	62.87
Bra024420.1-P	Field mustard	cytosol	60.62	62.55
PGSC0003DMT400013977	Potato	cytosol	47.01	61.13
Zm00001d039487_P001	Maize	mitochondrion	52.78	55.41
Zm00001d002592_P002	Maize	cytosol	48.45	48.45
Zm00001d026060_P003	Maize	cytosol	48.87	46.47
Zm00001d045479_P001	Maize	cytosol, peroxisome, plastid	40.82	35.87
Zm00001d044135_P001	Maize	cytosol	2.89	25.0
Zm00001d003953_P001	Maize	cytosol	4.54	24.72
Zm00001d020590_P009	Maize	cytosol	19.79	19.39
Zm00001d030557_P001	Maize	cytosol, extracellular	17.73	17.84
Zm00001d007937_P001	Maize	mitochondrion	17.32	17.54
Zm00001d022152_P001	Maize	mitochondrion	18.76	16.82
Zm00001d006875_P001	Maize	plastid	19.18	16.64
Zm00001d032984_P001	Maize	mitochondrion	9.69	14.37
Zm00001d008277_P001	Maize	cytosol	11.13	12.68
Zm00001d014258_P002	Maize	cytosol	18.35	10.07

Protein Annotations

MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	EMBL:BT060895	UniProt:C0HEY9
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS	ProteinID:ONM08829.1	PFAM:PF00155
PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF10	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI00019488CF	EnsemblPlantsGene:Zm00001d033862	EnsemblPlants:Zm00001d033862_P001	EnsemblPlants:Zm00001d033862_T001

Description

1-aminocyclopropane-1-carboxylate synthase6 1-aminocyclopropane-1-carboxylate synthase6

Coordinates

chr1:-:276519506..276521984

Molecular Weight (calculated)

53086.5 Da

IEP (calculated)

8.203

GRAVY (calculated)

-0.103

Length

485 amino acids

Sequence
(BLAST)

001: MVSMIADEKP QPQLLSKKAA CNSHGQDSSY FLGWEEYEKN PYDPVANPGG IIQMGLAENQ LSFDLLEAWL EANPDALGLR RGGASVFREL ALFQDYHGMP
101: AFKNALARFM SEQRGYRVTF DPSNIVLTAG ATSANEALMF CLADHGDAFL IPTPYYPGFD RDLKWRTGAE IVPVHCTSGN GFRLTRAALD DAYRRAQKLR
201: LRVKGVLITN PSNPLGTTSP RADLEMLVDF VAAKGIHLVS DEIYSGTVFA DPGFVSVLEV VAARAATDDG VVGVGPLSDR VHVVYSLSKD LGLPGFRVGA
301: IYSSNAGVVS AATKMSSFGL VSSQTQHLLA SLLGDRDFTR RYIAENTRRI RERREQLAEG LAAVGIECLE SNAGLFCWVN MRRLMRSRSF EGEMELWKKV
401: VFEVGLNISP GSSCHCREPG WFRVCFANMS AKTLDVALQR LGAFAEAATA GRRVLAPARS ISLPVRFSWA NRLTPGSAAD RKAER

Best Arabidopsis Sequence Match ( AT4G37770.1 )
(BLAST)

001: MGLLSKKASC NTHGQDSSYF WGWEEYEKNP YDEIKNPDGI IQMGLAENQL SFDLIESWLA KNPDAANFQR EGQSIFRELA LFQDYHGLPS FKNAMADFMS
101: ENRGNRVSFN PNKLVLTAGA TPANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIQCKSANG FRITKVALEE AYEQAQKLNL KVKGVLITNP
201: SNPLGTTTTR TELNHLLDFI SRKKIHLISD EIYSGTVFTN PGFISVMEVL KDRKLENTDV FDRVHIVYSL SKDLGLPGFR VGVIYSNDDF VVSAATKMSS
301: FGLISSQTQY LLSALLSDKT FTKNYLEENQ IRLKNRHKKL VSGLEAAGIE CLKSNAGLFC WVDMRHLLKS NTFEAEIELW KKIVYEVKLN ISPGSSCHCN
401: EPGWFRVCFA NLSEETLKVA LDRLKRFVDG PSPTRRSQSE HQRLKNLRKM KVSNWVFRLS FHDREPEER

Arabidopsis Description

ACS81-aminocyclopropane-1-carboxylate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q56Y32]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.