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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400000771
PGSC0003DMT400008587
PGSC0003DMT400008605
PGSC0003DMT400012864
PGSC0003DMT400013977
PGSC0003DMT400014932
PGSC0003DMT400031769
PGSC0003DMT400032096
PGSC0003DMT400043903
PGSC0003DMT400049804
PGSC0003DMT400051035
PGSC0003DMT400055203

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G22810.1 PGSC0003DMT400008587 AT2G22810.1 14983000
AT2G22810.1 PGSC0003DMT400008605 AT2G22810.1 14983000
AT2G22810.1 PGSC0003DMT400013977 AT2G22810.1 14983000
AT2G22810.1 PGSC0003DMT400055203 AT2G22810.1 14983000
AT2G22810.1 PGSC0003DMT400012864 AT4G11280.1 14983000
AT2G22810.1 PGSC0003DMT400014932 AT4G11280.1 14983000
AT2G22810.1 PGSC0003DMT400031769 AT4G11280.1 14983000
AT2G22810.1 PGSC0003DMT400032096 AT4G11280.1 14983000
AT2G22810.1 PGSC0003DMT400000771 AT4G26200.1 14983000
AT2G22810.1 PGSC0003DMT400043903 AT4G26200.1 14983000
AT2G22810.1 PGSC0003DMT400008587 AT4G37770.1 14983000
AT2G22810.1 PGSC0003DMT400008605 AT4G37770.1 14983000
AT2G22810.1 PGSC0003DMT400013977 AT4G37770.1 14983000
AT2G22810.1 PGSC0003DMT400055203 AT4G37770.1 14983000
AT4G37770.1 PGSC0003DMT400008587 AT2G22810.1 14983000
AT4G37770.1 PGSC0003DMT400008605 AT2G22810.1 14983000
AT4G37770.1 PGSC0003DMT400013977 AT2G22810.1 14983000
AT4G37770.1 PGSC0003DMT400055203 AT2G22810.1 14983000
AT4G37770.1 PGSC0003DMT400008587 AT4G37770.1 14983000
AT4G37770.1 PGSC0003DMT400008605 AT4G37770.1 14983000
AT4G37770.1 PGSC0003DMT400013977 AT4G37770.1 14983000
AT4G37770.1 PGSC0003DMT400055203 AT4G37770.1 14983000
AT5G65800.1 PGSC0003DMT400049804 AT4G02680.1 15118728
AT5G65800.1 PGSC0003DMT400051035 AT5G58550.1 15118728
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400008605 Potato cytosol 90.02 98.11
Solyc02g063540.1.1 Tomato cytosol 59.22 96.13
PGSC0003DMT400055203 Potato cytosol 87.2 85.71
PGSC0003DMT400013977 Potato cytosol 66.38 82.04
VIT_00s0840g00010.t01 Wine grape cytosol 80.91 79.53
VIT_00s1437g00010.t01 Wine grape cytosol 80.91 79.53
CDY66472 Canola cytosol 69.41 79.4
CDX75675 Canola cytosol 76.36 78.05
Bra011784.1-P Field mustard cytosol 77.01 75.69
CDX69326 Canola cytosol 77.01 75.69
AT4G37770.1 Thale cress cytosol 76.36 75.05
Bra010611.1-P Field mustard cytosol 76.36 75.05
CDY69462 Canola cytosol 76.14 74.84
Bra030199.1-P Field mustard cytosol 75.92 73.84
CDY25639 Canola cytosol 75.49 73.42
GSMUA_Achr1P14280_001 Banana nucleus 72.67 73.3
CDX89520 Canola cytosol 75.27 73.21
GSMUA_Achr3P25830_001 Banana mitochondrion 71.15 73.05
GSMUA_Achr2P08600_001 Banana cytosol 73.32 73.0
KRH28319 Soybean cytosol 74.4 72.82
KRH04373 Soybean cytosol 74.62 72.42
KRH77167 Soybean cytosol 73.75 72.34
AT2G22810.1 Thale cress cytosol 73.75 71.73
AT3G49700.1 Thale cress cytosol 73.1 71.7
KRH58165 Soybean cytosol 74.62 71.67
CDX81296 Canola cytosol 68.11 71.53
AT5G65800.1 Thale cress cytosol 72.89 71.49
CDY23035 Canola cytosol 72.23 71.46
CDY18674 Canola cytosol 67.9 71.3
CDY02111 Canola cytosol 72.45 71.06
Bra012924.1-P Field mustard cytosol 72.45 71.06
Bra031846.1-P Field mustard cytosol 72.23 70.85
Bra037829.1-P Field mustard cytosol 67.46 70.84
CDY08163 Canola cytosol 72.02 70.64
Bra017962.1-P Field mustard cytosol 72.02 70.64
GSMUA_Achr5P08880_001 Banana cytosol 71.37 70.6
CDY05953 Canola cytosol 71.8 70.43
Bra024420.1-P Field mustard cytosol 71.58 70.21
GSMUA_Achr4P01340_001 Banana mitochondrion 69.85 69.7
GSMUA_Achr1P04420_001 Banana cytosol 68.76 68.61
PGSC0003DMT400012600 Potato cytosol 66.81 65.95
Os03t0727600-01 Rice cytosol 68.33 64.68
TraesCS4A01G256500.1 Wheat cytosol 67.68 64.33
TraesCS4B01G058200.1 Wheat cytosol 67.68 64.33
TraesCS4D01G058200.1 Wheat cytosol 67.25 63.92
Zm00001d033862_P001 Maize cytosol 67.25 63.92
EER90948 Sorghum cytosol 66.38 61.57
PGSC0003DMT400043903 Potato cytosol 54.88 57.37
PGSC0003DMT400000771 Potato cytosol 53.8 57.14
HORVU4Hr1G009800.5 Barley cytosol, plastid 67.25 54.29
PGSC0003DMT400084228 Potato cytosol 19.31 50.86
PGSC0003DMT400000553 Potato cytosol 52.71 50.0
PGSC0003DMT400031769 Potato cytosol 51.63 49.07
PGSC0003DMT400012864 Potato cytosol 51.41 48.87
PGSC0003DMT400032096 Potato cytosol 51.19 48.76
PGSC0003DMT400014932 Potato cytosol 51.19 48.56
PGSC0003DMT400055753 Potato vacuole 38.18 46.32
PGSC0003DMT400079664 Potato golgi, mitochondrion, plastid 41.21 37.7
PGSC0003DMT400092723 Potato cytosol 9.11 35.9
PGSC0003DMT400010000 Potato plastid 41.0 34.36
PGSC0003DMT400012549 Potato cytosol, mitochondrion 21.69 20.53
PGSC0003DMT400047918 Potato cytosol 18.44 17.67
PGSC0003DMT400042202 Potato cytosol, mitochondrion, peroxisome, plastid 2.6 14.12
Protein Annotations
EntrezGene:102584590MapMan:11.5.1.1Gene3D:3.40.640.10Gene3D:3.90.1150.10InterPro:Aminotransferase_I/IIProteinID:CAA81747
ProteinID:CAA81747.1ProteinID:CAA81748ProteinID:CAA81748.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016829GO:GO:0016847
GO:GO:0030170GO:GO:0042218InterPro:IPR015421InterPro:IPR015422UniProt:M0ZUT0InterPro:NHTrfase_class1_PyrdxlP-BS
PFAM:PF00155EnsemblPlantsGene:PGSC0003DMG400003325PGSC:PGSC0003DMG400003325EnsemblPlants:PGSC0003DMT400008587PRINTS:PR00753ScanProsite:PS00105
PANTHER:PTHR43795PANTHER:PTHR43795:SF10InterPro:PyrdxlP-dep_TrfaseInterPro:PyrdxlP-dep_Trfase_dom1InterPro:PyrdxlP-dep_Trfase_majorSUPFAM:SSF53383
UniParc:UPI0002957C77RefSeq:XP_006364400.1EMBL:Z27233EMBL:Z27234SEG:seg:
Description
1-aminocyclopropane-1-carboxylate synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400003325]
Coordinates
chr2:-:22591072..22592651
Molecular Weight (calculated)
52420.8 Da
IEP (calculated)
8.516
GRAVY (calculated)
-0.315
Length
461 amino acids
Sequence
(BLAST)
001: MKLLSKKAMC NSHGQDSSYF LGWEEYEKNP YDETRNPKGI IQMGLAENQL SFDLLESWLT QNPDAAAFKR NGNSIFRELA LFQDYHGLPA FKDALVQFMS
101: EIRGNKVSFD SNKLVLTAGA TSANETLIFC LADPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIQCTSSNG FRITESALEE AYKEAERRNL RVKGVLVTNP
201: SNPLGTTLTK KELQLLLTFV STKQIHLISD EIYSGTVFNS PKFVSVMEVL IENNYMYTEV WDRVHIVYSL SKDLGLPGFR VGAIYSNDVM VVSAATKMSS
301: FGLISSQTQY LLSALLSDKK FTKKYVSENQ KRLKKRHEML VGGLKQIGIR CLESNAGLFC WVDMRHLLSS NTFDGEMELW KKIVYEVGLN ISPGSSCHCT
401: EPGWFRACFA NMSEDTLNIA IQRLKAFVDS RDIQNQQHSN KKKSFSKWVF RLSFNERQRE R
Best Arabidopsis Sequence Match ( AT4G37770.1 )
(BLAST)
001: MGLLSKKASC NTHGQDSSYF WGWEEYEKNP YDEIKNPDGI IQMGLAENQL SFDLIESWLA KNPDAANFQR EGQSIFRELA LFQDYHGLPS FKNAMADFMS
101: ENRGNRVSFN PNKLVLTAGA TPANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIQCKSANG FRITKVALEE AYEQAQKLNL KVKGVLITNP
201: SNPLGTTTTR TELNHLLDFI SRKKIHLISD EIYSGTVFTN PGFISVMEVL KDRKLENTDV FDRVHIVYSL SKDLGLPGFR VGVIYSNDDF VVSAATKMSS
301: FGLISSQTQY LLSALLSDKT FTKNYLEENQ IRLKNRHKKL VSGLEAAGIE CLKSNAGLFC WVDMRHLLKS NTFEAEIELW KKIVYEVKLN ISPGSSCHCN
401: EPGWFRVCFA NLSEETLKVA LDRLKRFVDG PSPTRRSQSE HQRLKNLRKM KVSNWVFRLS FHDREPEER
Arabidopsis Description
ACS81-aminocyclopropane-1-carboxylate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q56Y32]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.