Factsheet for Bra024420.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000868.1-P
Bra002638.1-P
Bra022691.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G65800.1	Bra000868.1-P	AT4G02680.1	15118728
AT5G65800.1	Bra002638.1-P	AT5G58550.1	15118728
AT5G65800.1	Bra022691.1-P	AT5G58550.1	15118728

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031846.1-P	Field mustard	cytosol	97.45	97.45
AT5G65800.1	Thale cress	cytosol	97.23	97.23
Bra037829.1-P	Field mustard	cytosol	89.79	96.13
Bra012924.1-P	Field mustard	cytosol	91.06	91.06
Bra017962.1-P	Field mustard	cytosol	90.21	90.21
Bra011784.1-P	Field mustard	cytosol	77.02	77.19
Bra010611.1-P	Field mustard	cytosol	76.17	76.33
VIT_00s0840g00010.t01	Wine grape	cytosol	73.62	73.77
VIT_00s1437g00010.t01	Wine grape	cytosol	73.4	73.56
Solyc02g091990.2.1	Tomato	cytosol	73.19	73.35
PGSC0003DMT400055203	Potato	cytosol	73.19	73.35
Bra030199.1-P	Field mustard	cytosol	73.62	73.0
KRH77167	Soybean	cytosol	71.7	71.7
PGSC0003DMT400008587	Potato	cytosol	70.21	71.58
KRH28319	Soybean	cytosol	71.7	71.55
Solyc02g063540.1.1	Tomato	cytosol	43.19	71.48
PGSC0003DMT400008605	Potato	cytosol	63.83	70.92
Solyc03g043890.2.1	Tomato	cytosol	71.06	70.91
PGSC0003DMT400013977	Potato	cytosol	56.17	70.78
KRH04373	Soybean	cytosol	71.49	70.74
GSMUA_Achr3P25830_001	Banana	mitochondrion	65.96	69.04
KRH58165	Soybean	cytosol	70.43	68.96
GSMUA_Achr2P08600_001	Banana	cytosol	67.87	68.9
GSMUA_Achr5P08880_001	Banana	cytosol	67.45	68.03
GSMUA_Achr1P14280_001	Banana	nucleus	65.32	67.18
GSMUA_Achr4P01340_001	Banana	mitochondrion	64.89	66.02
GSMUA_Achr1P04420_001	Banana	cytosol	64.26	65.37
Bra000637.1-P	Field mustard	cytosol	63.19	64.01
TraesCS4B01G058200.1	Wheat	cytosol	62.77	60.82
Zm00001d033862_P001	Maize	cytosol	62.55	60.62
TraesCS4A01G256500.1	Wheat	cytosol	62.55	60.62
TraesCS4D01G058200.1	Wheat	cytosol	62.13	60.21
Os03t0727600-01	Rice	cytosol	62.13	59.96
EER90948	Sorghum	cytosol	62.77	59.36
Bra026456.1-P	Field mustard	cytosol	53.19	55.8
Bra019117.1-P	Field mustard	cytosol	52.77	54.99
HORVU4Hr1G009800.5	Barley	cytosol, plastid	61.7	50.79
Bra007611.1-P	Field mustard	cytosol	50.43	50.11
Bra033261.1-P	Field mustard	cytosol	51.7	48.7
Bra035236.1-P	Field mustard	cytosol	50.0	48.16
Bra022560.1-P	Field mustard	mitochondrion, plastid	39.15	36.8
Bra027008.1-P	Field mustard	cytosol	36.81	31.86
Bra024580.1-P	Field mustard	cytosol	19.79	19.46
Bra016353.1-P	Field mustard	cytosol	19.79	19.46
Bra012371.1-P	Field mustard	cytosol	18.72	19.3
Bra016202.1-P	Field mustard	cytosol	19.15	18.67
Bra016607.1-P	Field mustard	mitochondrion	20.64	17.9
Bra025984.1-P	Field mustard	cytosol, mitochondrion	20.43	17.88
Bra026675.1-P	Field mustard	mitochondrion	20.43	17.52
Bra009959.1-P	Field mustard	cytosol, peroxisome, plasma membrane	10.64	14.53

Protein Annotations

MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	EnsemblPlantsGene:Bra024420	EnsemblPlants:Bra024420.1
EnsemblPlants:Bra024420.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	UniProt:M4E6L6	InterPro:NHTrfase_class1_PyrdxlP-BS
PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF10	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI000253EEAE	:	:

Description

AT5G65800 (E=2e-268) ACS5, CIN5, ETO2, ATACS5 | ACS5 (ACC SYNTHASE 5); 1-aminocyclopropane-1-carboxylate synthase

Coordinates

chrA06:-:15689038..15690653

Molecular Weight (calculated)

53250.9 Da

IEP (calculated)

8.450

GRAVY (calculated)

-0.333

Length

470 amino acids

Sequence
(BLAST)

001: MKQLSTKVTS NGHGQDSSYF LGWEEYEKNP YDEIKNPNGM IQMGLAENQL CFDLIESWLA KNPDAASLKR KGQSIFKELA LFQDYHGMPE FKKAMAEFME
101: EIRGNRVTFD PKKIVLAAGS TSANENLMFC LAEPGDAFLL PTPYYPGFDR DLKWRTVAEI VPIHCSSSNG FQITESARQQ AYQQAHKLGL KVKGVLVTNP
201: SNPLGTALTR RELTLLVDFI TSKNIHLISD EIYSGTMFGF EQFISVMDVL KDKKLENTEV SKRVHVVYSL SKDLGLPGFR VGAIYSNDDM IVSAATKMSS
301: FGLVSSQTQY LLSALLSDKK FTSQYLEENQ KRLKSRQKRL VSGLESAGIT CLRSNAGLFC WVDMRHLLDT NTFEAELDLW KKIVYNVKLN ISPGSSCHCT
401: EPGWFRVCFA NMSEDTLDLA LKRLKTFVES TDCGRMISRS SHERLKSLRK KTVSNWVFRV SWSDRVPDER

Best Arabidopsis Sequence Match ( AT5G65800.1 )
(BLAST)

001: MKQLSTKVTS NGHGQDSSYF LGWEEYEKNP YDEIKNPNGM IQMGLAENQL CFDLIESWLT KNPDAASLKR NGQSIFRELA LFQDYHGMPE FKKAMAEFME
101: EIRGNRVTFD PKKIVLAAGS TSANETLMFC LAEPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIHCSSSNG FQITESALQQ AYQQAQKLDL KVKGVLVTNP
201: SNPLGTALTR RELNLLVDFI TSKNIHLISD EIYSGTMFGF EQFISVMDVL KDKKLEDTEV SKRVHVVYSL SKDLGLPGFR VGAIYSNDEM IVSAATKMSS
301: FGLVSSQTQY LLSALLSDKK FTSQYLEENQ KRLKSRQRRL VSGLESAGIT CLRSNAGLFC WVDMRHLLDT NTFEAELDLW KKIVYNVKLN ISPGSSCHCT
401: EPGWFRVCFA NMSEDTLDLA LKRLKTFVES TDCGRMISRS SHERLKSLRK KTVSNWVFRV SWTDRVPDER

Arabidopsis Description

ACS5ETO2 [Source:UniProtKB/TrEMBL;Acc:A0A178UQM2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.