Factsheet for Bra019117.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra019117.1-P
Bra026456.1-P
Bra030199.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26200.1	Bra030199.1-P	AT2G22810.1	14983000
AT4G26200.1	Bra019117.1-P	AT4G26200.1	14983000
AT4G26200.1	Bra026456.1-P	AT4G26200.1	14983000

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42751	Canola	cytosol	100.0	100.0
AT4G26200.1	Thale cress	cytosol	92.46	93.29
Bra026456.1-P	Field mustard	cytosol	92.24	92.86
KRH41440	Soybean	cytosol	75.61	77.5
KRH60148	Soybean	cytosol	75.39	77.27
KRH49039	Soybean	cytosol	76.05	76.91
KRH74169	Soybean	cytosol	74.94	75.78
PGSC0003DMT400000771	Potato	cytosol	72.51	75.35
VIT_11s0016g02560.t01	Wine grape	cytosol, nucleus, peroxisome	73.84	74.83
Solyc12g008740.1.1	Tomato	cytosol	71.84	74.65
Solyc07g026900.1.1	Tomato	cytosol	72.73	74.38
PGSC0003DMT400043903	Potato	cytosol	72.28	73.92
TraesCS3A01G106600.1	Wheat	cytosol, plastid	68.96	68.81
TraesCS3D01G108700.1	Wheat	cytosol, plastid	68.74	68.58
EES00139	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	70.29	68.47
GSMUA_Achr10P...	Banana	cytosol	66.74	68.41
TraesCS3B01G125200.1	Wheat	plastid	68.51	67.91
GSMUA_Achr4P30870_001	Banana	cytosol	62.97	67.3
Zm00001d039487_P001	Maize	mitochondrion	68.29	66.67
Os05t0196600-00	Rice	cytosol	63.86	63.72
HORVU3Hr1G019430.6	Barley	cytosol, mitochondrion	59.2	62.09
Os05t0319200-00	Rice	cytosol, mitochondrion, plastid	66.08	60.08
Bra010611.1-P	Field mustard	cytosol	58.98	56.72
Os01t0192900-00	Rice	endoplasmic reticulum, plasma membrane	66.96	56.66
Bra011784.1-P	Field mustard	cytosol	57.65	55.44
Bra030199.1-P	Field mustard	cytosol	57.65	54.85
Bra000637.1-P	Field mustard	cytosol	56.1	54.53
Bra012924.1-P	Field mustard	cytosol	55.88	53.62
Bra037829.1-P	Field mustard	cytosol	51.88	53.3
Bra017962.1-P	Field mustard	cytosol	55.43	53.19
Bra024420.1-P	Field mustard	cytosol	54.99	52.77
Bra031846.1-P	Field mustard	cytosol	54.77	52.55
Bra007611.1-P	Field mustard	cytosol	53.66	51.16
Bra035236.1-P	Field mustard	cytosol	54.1	50.0
Bra033261.1-P	Field mustard	cytosol	53.88	48.7
Bra022560.1-P	Field mustard	mitochondrion, plastid	40.58	36.6
Bra027008.1-P	Field mustard	cytosol	39.69	32.97
HORVU3Hr1G019410.1	Barley	endoplasmic reticulum	15.74	30.74
Bra012371.1-P	Field mustard	cytosol	20.4	20.18
Bra016353.1-P	Field mustard	cytosol	21.29	20.08
Bra024580.1-P	Field mustard	cytosol	21.06	19.87
Bra025984.1-P	Field mustard	cytosol, mitochondrion	23.5	19.74
Bra016607.1-P	Field mustard	mitochondrion	23.5	19.56
Bra016202.1-P	Field mustard	cytosol	20.84	19.5
Bra026675.1-P	Field mustard	mitochondrion	23.06	18.98
Bra009959.1-P	Field mustard	cytosol, peroxisome, plasma membrane	9.31	12.21

Protein Annotations

MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	EnsemblPlantsGene:Bra019117	EnsemblPlants:Bra019117.1
EnsemblPlants:Bra019117.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	UniProt:M4DRH4	InterPro:NHTrfase_class1_PyrdxlP-BS
PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF28	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI00025411D2	SEG:seg	:

Description

AT4G26200 (E=5e-233) ACS7, ATACS7 | ACS7; 1-aminocyclopropane-1-carboxylate synthase

Coordinates

chrA03:+:26258835..26260440

Molecular Weight (calculated)

51199.9 Da

IEP (calculated)

6.301

GRAVY (calculated)

-0.353

Length

451 amino acids

Sequence
(BLAST)

001: MGLPLMINND DNNNNKVELS RVAVSDTHGE DSPYFAGWKA YDENPYDESH NPSGVIQMGL AENQVSFDLL ESYLEKKNPE GSLWESKGSC GFRENALFQD
101: YHGLKTFRQA MASFMEKIRG GKARFDPDRI VLTAGATAAN ELLTFILANP NDALLVPTPY YPGFDRDLRW RTGVRIVPIH CDSSNHFQIT PEALETAYET
201: ARDANIRVRG VLITNPSNPL GATVQKKALE DLLDFCVRKN IHLVSDEIYS GSVFHASEFT SVAEIVENID DVSVKERVHI VYSLSKDLGL PGFRVGTIYS
301: YNDNVVRTAR RMSSFTLVSS QTQHMLASML SDEEFTEKYI RINRERLRRR YETIVEGLKK EGVECLKGNA GLFCWMNLGF LLNTNTKEGE LELWDVILKE
401: LKLNISPGSS CHCSEFGWFR VCFANMSEKT LKIALKRIHE FMDRRRKVLN C

Best Arabidopsis Sequence Match ( AT4G26200.1 )
(BLAST)

001: MGLPLMMERS SNNNNVELSR VAVSDTHGED SPYFAGWKAY DENPYDESHN PSGVIQMGLA ENQVSFDLLE TYLEKKNPEG SMWGSKGAPG FRENALFQDY
101: HGLKTFRQAM ASFMEQIRGG KARFDPDRIV LTAGATAANE LLTFILADPN DALLVPTPYY PGFDRDLRWR TGVKIVPIHC DSSNHFQITP EALESAYQTA
201: RDANIRVRGV LITNPSNPLG ATVQKKVLED LLDFCVRKNI HLVSDEIYSG SVFHASEFTS VAEIVENIDD VSVKERVHIV YSLSKDLGLP GFRVGTIYSY
301: NDNVVRTARR MSSFTLVSSQ TQHMLASMLS DEEFTEKYIR INRERLRRRY DTIVEGLKKA GIECLKGNAG LFCWMNLGFL LEKKTKDGEL QLWDVILKEL
401: NLNISPGSSC HCSEVGWFRV CFANMSENTL EIALKRIHEF MDRRRRF

Arabidopsis Description

ACS71-aminocyclopropane-1-carboxylate synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STR4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.