Factsheet for Solyc07g026900.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g063540.1.1
Solyc02g091990.2.1
Solyc03g043890.2.1
Solyc07g026900.1.1
Solyc12g008740.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26200.1	Solyc02g063540.1.1	AT2G22810.1	14983000
AT4G26200.1	Solyc02g091990.2.1	AT2G22810.1	14983000
AT4G26200.1	Solyc03g043890.2.1	AT2G22810.1	14983000
AT4G26200.1	Solyc07g026900.1.1	AT4G26200.1	14983000
AT4G26200.1	Solyc12g008740.1.1	AT4G26200.1	14983000

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400043903	Potato	cytosol	93.88	93.88
Solyc12g008740.1.1	Tomato	cytosol	80.05	81.34
VIT_11s0016g02560.t01	Wine grape	cytosol, nucleus, peroxisome	81.18	80.45
KRH41440	Soybean	cytosol	78.46	78.64
KRH60148	Soybean	cytosol	78.23	78.41
KRH74169	Soybean	cytosol	78.46	77.58
KRH49039	Soybean	cytosol	78.46	77.58
AT4G26200.1	Thale cress	cytosol	76.19	75.17
CDX89355	Canola	cytosol	75.51	74.33
CDY72652	Canola	cytosol	33.79	74.13
Bra026456.1-P	Field mustard	cytosol	75.28	74.11
CDX94359	Canola	cytosol	74.83	73.66
CDY71142	Canola	cytosol	74.83	73.66
Bra019117.1-P	Field mustard	cytosol	74.38	72.73
CDY42751	Canola	cytosol	74.38	72.73
CDX92755	Canola	cytosol	68.03	72.12
GSMUA_Achr10P...	Banana	cytosol	69.61	69.77
GSMUA_Achr4P30870_001	Banana	cytosol	65.76	68.72
TraesCS3D01G108700.1	Wheat	cytosol, plastid	66.67	65.04
TraesCS3A01G106600.1	Wheat	cytosol, plastid	66.44	64.82
EES00139	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	68.03	64.79
TraesCS3B01G125200.1	Wheat	plastid	66.67	64.62
Zm00001d039487_P001	Maize	mitochondrion	66.89	63.85
Os05t0196600-00	Rice	cytosol	64.4	62.83
HORVU3Hr1G019430.6	Barley	cytosol, mitochondrion	58.05	59.53
Solyc02g063540.1.1	Tomato	cytosol	37.87	58.8
Os05t0319200-00	Rice	cytosol, mitochondrion, plastid	65.31	58.06
Os01t0192900-00	Rice	endoplasmic reticulum, plasma membrane	65.99	54.6
Solyc02g091990.2.1	Tomato	cytosol	57.6	54.16
Solyc03g043890.2.1	Tomato	cytosol	56.01	52.44
Solyc04g077410.2.1	Tomato	cytosol	54.42	50.96
Solyc01g095080.2.1	Tomato	cytosol	55.56	50.52
Solyc08g081540.2.1	Tomato	cytosol	55.1	50.31
Solyc08g081550.2.1	Tomato	cytosol	53.51	50.0
Solyc08g008110.2.1	Tomato	cytosol, nucleus	11.34	49.51
Solyc12g056180.1.1	Tomato	cytosol	53.06	49.47
Solyc05g050010.2.1	Tomato	cytosol	53.29	49.37
Solyc08g008100.2.1	Tomato	nucleus	38.32	46.3
Solyc03g007070.2.1	Tomato	cytosol	43.99	36.26
Solyc08g079750.2.1	Tomato	plastid	43.54	35.04
HORVU3Hr1G019410.1	Barley	endoplasmic reticulum	14.97	28.57
Solyc05g013380.2.1	Tomato	extracellular, nucleus, plastid	21.32	19.54
Solyc03g123600.2.1	Tomato	cytosol	20.86	19.01
Solyc06g063090.2.1	Tomato	extracellular	23.13	18.82
Solyc01g007940.2.1	Tomato	cytosol	20.18	18.82
Solyc03g123610.2.1	Tomato	plastid	21.09	15.35

Protein Annotations

MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0030170	InterPro:IPR015421
InterPro:IPR015422	UniProt:K4CDD4	InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105
PANTHER:PTHR43795	PANTHER:PTHR43795:SF28	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383
EnsemblPlantsGene:Solyc07g026900.1	EnsemblPlants:Solyc07g026900.1.1	UniParc:UPI000276AE3A	:	:	:

Description

No Description!

Coordinates

chr7:+:32131840..32133366

Molecular Weight (calculated)

49969.6 Da

IEP (calculated)

5.888

GRAVY (calculated)

-0.272

Length

441 amino acids

Sequence
(BLAST)

001: MAIEIEKRST VVGLSNVATS DTHGEDSPYF AGWKAYDENP FDEVHNPSGV IQMGLAENQV SFDLLEEYLE KQKDDGVAEI SRFRENALFQ DYHGLVCFRK
101: AMASFMEKIR GGRARFDPDR VVITAGATAA NELLTFILAD PGDALLLPTP YYPGFDRDLR WRTGVKIVPV HCDSSNNFQV TPRALEDAYK EAESNNIKVR
201: GVLITNPSNP LGATVQRCVL EEILEFVTRK NIHLVSDEIY SGSAFCCSEF VSIAEILESR NYKDSERVHI VYSLSKDLGL PGFRVGTIYS YNDKVVTTAR
301: RMSSFTLISS QTQQLLASML SDETFTENYI KKNRERLRMR YEMMIEGLRS AGIECLRGNA GLFCWMNLTS LLEKPTKECE LQVWNTILNQ VKLNISPGSS
401: CHCSEPGWFR VCFANMTENT LQIALKRIHH FMETRATLQK Y

Best Arabidopsis Sequence Match ( AT4G26200.1 )
(BLAST)

001: MGLPLMMERS SNNNNVELSR VAVSDTHGED SPYFAGWKAY DENPYDESHN PSGVIQMGLA ENQVSFDLLE TYLEKKNPEG SMWGSKGAPG FRENALFQDY
101: HGLKTFRQAM ASFMEQIRGG KARFDPDRIV LTAGATAANE LLTFILADPN DALLVPTPYY PGFDRDLRWR TGVKIVPIHC DSSNHFQITP EALESAYQTA
201: RDANIRVRGV LITNPSNPLG ATVQKKVLED LLDFCVRKNI HLVSDEIYSG SVFHASEFTS VAEIVENIDD VSVKERVHIV YSLSKDLGLP GFRVGTIYSY
301: NDNVVRTARR MSSFTLVSSQ TQHMLASMLS DEEFTEKYIR INRERLRRRY DTIVEGLKKA GIECLKGNAG LFCWMNLGFL LEKKTKDGEL QLWDVILKEL
401: NLNISPGSSC HCSEVGWFRV CFANMSENTL EIALKRIHEF MDRRRRF

Arabidopsis Description

ACS71-aminocyclopropane-1-carboxylate synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STR4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.