Factsheet for Solyc03g007070.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
endoplasmic reticulum 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079664	Potato	golgi, mitochondrion, plastid	89.16	94.64
VIT_16s0022g02010.t01	Wine grape	cytosol	68.22	67.84
KRH38710	Soybean	plastid	62.8	63.52
KRH09217	Soybean	plastid	62.62	63.45
Bra022560.1-P	Field mustard	mitochondrion, plastid	58.5	62.6
CDY46931	Canola	mitochondrion, plastid	58.5	62.6
GSMUA_Achr5P13730_001	Banana	golgi, mitochondrion	58.5	62.23
AT5G51690.1	Thale cress	golgi, mitochondrion	57.57	62.22
CDX91604	Canola	mitochondrion, plastid	57.94	62.0
Solyc08g079750.2.1	Tomato	plastid	62.06	60.58
GSMUA_Achr1P18880_001	Banana	golgi, mitochondrion	57.38	60.55
HORVU7Hr1G053970.1	Barley	mitochondrion	8.79	60.26
TraesCS7D01G060600.2	Wheat	golgi, mitochondrion	55.33	57.81
HORVU2Hr1G119710.1	Barley	mitochondrion	10.47	57.73
TraesCS4A01G422900.1	Wheat	golgi	55.89	54.07
TraesCS7A01G066400.1	Wheat	cytosol, golgi, plastid	55.7	53.99
Os06t0130400-01	Rice	plasma membrane	54.58	53.87
Zm00001d045479_P001	Maize	cytosol, peroxisome, plastid	55.51	53.8
EER87775	Sorghum	plastid	55.14	53.35
HORVU3Hr1G098750.1	Barley	cytosol, peroxisome	5.79	52.54
HORVU7Hr1G012940.1	Barley	cytosol	56.07	50.08
Solyc12g008740.1.1	Tomato	cytosol	36.82	45.39
Solyc02g063540.1.1	Tomato	cytosol	23.36	44.01
Solyc07g026900.1.1	Tomato	cytosol	36.26	43.99
GSMUA_Achr3P12300_001	Banana	mitochondrion	54.58	42.69
Solyc02g091990.2.1	Tomato	cytosol	36.07	41.15
Solyc03g043890.2.1	Tomato	cytosol	34.77	39.49
Solyc04g077410.2.1	Tomato	cytosol	34.02	38.64
Solyc01g095080.2.1	Tomato	cytosol	34.77	38.35
Solyc08g081540.2.1	Tomato	cytosol	34.39	38.1
Solyc12g056180.1.1	Tomato	cytosol	33.46	37.84
Solyc05g050010.2.1	Tomato	cytosol	33.08	37.18
Solyc08g081550.2.1	Tomato	cytosol	32.71	37.08
Solyc08g008100.2.1	Tomato	nucleus	23.74	34.79
HORVU3Hr1G016440.3	Barley	cytosol	20.19	34.62
Solyc08g008110.2.1	Tomato	cytosol, nucleus	5.79	30.69
Solyc03g123600.2.1	Tomato	cytosol	17.38	19.21
Solyc01g007940.2.1	Tomato	cytosol	16.64	18.82
Solyc05g013380.2.1	Tomato	extracellular, nucleus, plastid	16.82	18.71
Solyc06g063090.2.1	Tomato	extracellular	18.88	18.63
Solyc03g123610.2.1	Tomato	plastid	17.01	15.02

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.4.4	InterPro:Aminotransferase_I/II	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0030170	InterPro:IPR015421
InterPro:IPR015422	UniProt:K4BED0	InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105
PANTHER:PTHR43795	PANTHER:PTHR43795:SF7	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383
EnsemblPlantsGene:Solyc03g007070.2	EnsemblPlants:Solyc03g007070.2.1	UniParc:UPI0002767D7C	SEG:seg	:	:

Description

Probable aminotransferase ACS12 [Source:Projected from Arabidopsis thaliana (AT5G51690) UniProtKB/Swiss-Prot;Acc:Q8GYY0]

Coordinates

chr3:+:1631548..1637772

Molecular Weight (calculated)

58710.5 Da

IEP (calculated)

6.516

GRAVY (calculated)

-0.099

Length

535 amino acids

Sequence
(BLAST)

001: MTSAGQLKPN LDSENDTGKA SPGDSGGTSG MRLVVPLQGV VQGRGGLILG SLIPCALFYF LQFYLKRHRT TPSSSNPPSP STSSPNLSDL QRSSSRLNLS
101: TRGSVGRVFL SSRASLVAAP NDSPYYVGMD RFRADPYDEL DNPDGVIDLG IAENRLSLDL IEKWISSNVN IGSGGDGLNI NGILTYQPFD GMAELKVAMS
201: GFMSQVMGEK VSFDPSRMVL TSGATPAIEV LCFCLADHGN ALLVPTPYYP GFDRDIRWRT GVDLIPVYCR SSDAFMVDIT TLDQAFNHAR KRGKKVRGIL
301: ISNPSNPVGN ILNREMLYRI LDFAREKNIH VISDEIFAGS NYGGEEFVSI AEILDEDDAD RDRVHIIYGL SKDLSVPGFR LGVLYSFNEN VVAASKKLTR
401: FCAASAPTQS LLVAMLSDAG FIKDYMRTNR ERLRKVFDLF VAGLKQLGIE CMKSSAGLYC WVNMSGLIGP YNEKGELELW EKLLNVAKIN VTPGSACHCI
501: EPGWFRCCFS TVEEKGIPVV MERIRKVVEL VRPSD

Best Arabidopsis Sequence Match ( AT5G51690.1 )
(BLAST)

001: MRLIVPLRGV IQGRGGLFVG SLIPCCLFYF LQLYLKRRRP PPSDPTDLPR TFSRTNLFSR GNSIGRVRVS SRAVPVAKPS DSPYYIGLER VKTDPYDRIT
101: NTDGIIQLGL AESTLCFDLL QRWMSENLME SMMQSDDGEF DISSIAMYKP FEGLLELRVA FADFMSRIMG GNVSFDPSNM VITAGGTPAI EVLAFCLADH
201: GNAFLIPTPY YPGFDRDIKF RTGVELIPVH CRSSDNFTVT VSALEQALNQ ARKRGSKVSG ILFSNPSNPV GNILSRETLC DILRFAQEKN IHVISDEIFA
301: GSVYGDKEFV SMAEIAGSGE FDKTRVHIIY GLSKDLSIPG FRAGVIYSFH EDVVNAAKKL MRFSSVPVLV QRILISLLSD VRFIEGYMAA HRQRIRDKHI
401: RFVEGLKQLG IPCAESGGGL YCWVDMSSLL TSYSEKGELE LFEKLLTVAK INATPGTACY CIEPGWFRCC FTALADEDIP VIMERIRQLA ESFRS

Arabidopsis Description

ACS12Probable aminotransferase ACS12 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYY0]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.