Factsheet for Solyc02g091990.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g063540.1.1
Solyc02g091990.2.1
Solyc03g043890.2.1
Solyc07g026900.1.1
Solyc08g008100.2.1
Solyc08g081540.2.1
Solyc08g081550.2.1
Solyc09g055310.2.1
Solyc09g065640.2.1
Solyc12g008740.1.1
Solyc12g056180.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G22810.1	Solyc02g063540.1.1	AT2G22810.1	14983000
AT2G22810.1	Solyc02g091990.2.1	AT2G22810.1	14983000
AT2G22810.1	Solyc03g043890.2.1	AT2G22810.1	14983000
AT2G22810.1	Solyc08g008100.2.1	AT4G11280.1	14983000
AT2G22810.1	Solyc08g081540.2.1	AT4G11280.1	14983000
AT2G22810.1	Solyc08g081550.2.1	AT4G11280.1	14983000
AT2G22810.1	Solyc12g056180.1.1	AT4G11280.1	14983000
AT2G22810.1	Solyc07g026900.1.1	AT4G26200.1	14983000
AT2G22810.1	Solyc12g008740.1.1	AT4G26200.1	14983000
AT2G22810.1	Solyc02g063540.1.1	AT4G37770.1	14983000
AT2G22810.1	Solyc02g091990.2.1	AT4G37770.1	14983000
AT2G22810.1	Solyc03g043890.2.1	AT4G37770.1	14983000
AT4G37770.1	Solyc02g063540.1.1	AT2G22810.1	14983000
AT4G37770.1	Solyc02g091990.2.1	AT2G22810.1	14983000
AT4G37770.1	Solyc03g043890.2.1	AT2G22810.1	14983000
AT4G37770.1	Solyc02g063540.1.1	AT4G37770.1	14983000
AT4G37770.1	Solyc02g091990.2.1	AT4G37770.1	14983000
AT4G37770.1	Solyc03g043890.2.1	AT4G37770.1	14983000
AT5G65800.1	Solyc09g065640.2.1	AT4G02680.1	15118728
AT5G65800.1	Solyc09g055310.2.1	AT5G58550.1	15118728

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055203	Potato	cytosol	97.87	97.87
Solyc02g063540.1.1	Tomato	cytosol	51.6	85.21
Solyc03g043890.2.1	Tomato	cytosol	83.8	83.44
VIT_00s0840g00010.t01	Wine grape	cytosol	81.24	81.24
VIT_00s1437g00010.t01	Wine grape	cytosol	81.02	81.02
CDY66472	Canola	cytosol	66.95	77.92
CDX75675	Canola	cytosol	74.41	77.38
CDX69326	Canola	cytosol	75.48	75.48
Bra011784.1-P	Field mustard	cytosol	75.27	75.27
AT4G37770.1	Thale cress	cytosol	75.05	75.05
KRH04373	Soybean	cytosol	75.91	74.95
KRH77167	Soybean	cytosol	75.05	74.89
KRH28319	Soybean	cytosol	74.84	74.52
AT3G49700.1	Thale cress	cytosol	74.63	74.47
CDX81296	Canola	cytosol	69.51	74.26
AT5G65800.1	Thale cress	cytosol	74.41	74.26
Bra010611.1-P	Field mustard	cytosol	74.2	74.2
KRH58165	Soybean	cytosol	75.91	74.17
CDX89520	Canola	cytosol	74.84	74.05
Bra030199.1-P	Field mustard	cytosol	74.84	74.05
CDY25639	Canola	cytosol	74.84	74.05
Bra031846.1-P	Field mustard	cytosol	74.2	74.04
CDY18674	Canola	cytosol	69.3	74.03
CDY69462	Canola	cytosol	73.99	73.99
CDY23035	Canola	cytosol	73.13	73.61
Bra037829.1-P	Field mustard	cytosol	68.87	73.58
Bra012924.1-P	Field mustard	cytosol	73.56	73.4
CDY02111	Canola	cytosol	73.56	73.4
Bra024420.1-P	Field mustard	cytosol	73.35	73.19
GSMUA_Achr1P14280_001	Banana	nucleus	71.0	72.87
GSMUA_Achr2P08600_001	Banana	cytosol	71.86	72.79
CDY08163	Canola	cytosol	72.92	72.77
Bra017962.1-P	Field mustard	cytosol	72.92	72.77
CDY05953	Canola	cytosol	72.71	72.55
AT2G22810.1	Thale cress	cytosol	73.13	72.36
GSMUA_Achr3P25830_001	Banana	mitochondrion	69.08	72.16
GSMUA_Achr5P08880_001	Banana	cytosol	70.58	71.03
GSMUA_Achr1P04420_001	Banana	cytosol	68.23	69.26
GSMUA_Achr4P01340_001	Banana	mitochondrion	68.02	69.05
Solyc04g077410.2.1	Tomato	cytosol	67.16	66.88
TraesCS4B01G058200.1	Wheat	cytosol	67.16	64.95
TraesCS4A01G256500.1	Wheat	cytosol	67.16	64.95
TraesCS4D01G058200.1	Wheat	cytosol	66.74	64.54
Os03t0727600-01	Rice	cytosol	66.74	64.27
Zm00001d033862_P001	Maize	cytosol	66.1	63.92
EER90948	Sorghum	cytosol	66.31	62.58
Solyc07g026900.1.1	Tomato	cytosol	54.16	57.6
Solyc12g008740.1.1	Tomato	cytosol	52.67	56.91
HORVU4Hr1G009800.5	Barley	cytosol, plastid	66.31	54.47
Solyc01g095080.2.1	Tomato	cytosol	53.09	51.34
Solyc12g056180.1.1	Tomato	cytosol	50.11	49.68
Solyc08g081540.2.1	Tomato	cytosol	50.75	49.28
Solyc05g050010.2.1	Tomato	cytosol	49.89	49.16
Solyc08g008110.2.1	Tomato	cytosol, nucleus	10.45	48.51
Solyc08g081550.2.1	Tomato	cytosol	48.4	48.09
Solyc08g008100.2.1	Tomato	nucleus	34.75	44.66
Solyc03g007070.2.1	Tomato	cytosol	41.15	36.07
Solyc08g079750.2.1	Tomato	plastid	41.15	35.22
Solyc03g123600.2.1	Tomato	cytosol	19.83	19.21
Solyc06g063090.2.1	Tomato	extracellular	22.17	19.19
Solyc05g013380.2.1	Tomato	extracellular, nucleus, plastid	19.62	19.13
Solyc01g007940.2.1	Tomato	cytosol	19.19	19.03
Solyc03g123610.2.1	Tomato	plastid	20.26	15.68

Protein Annotations

MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	ProteinID:AAA78789.1	ProteinID:AAB48946.1	InterPro:Aminotransferase_I/II
GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009693	GO:GO:0009835	GO:GO:0009987	GO:GO:0016829
GO:GO:0016847	GO:GO:0030170	GO:GO:0042218	InterPro:IPR015421	InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS
PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF10	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	UniProt:Q42881	SUPFAM:SSF53383	EnsemblPlantsGene:Solyc02g091990.2	EnsemblPlants:Solyc02g091990.2.1
EMBL:U17972	UniParc:UPI00000ABAEE	SEG:seg	:	:	:

Description

ACS31-aminocyclopropane-1-carboxylate synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q42881]

Coordinates

chr2:-:53208754..53210555

Molecular Weight (calculated)

53097.4 Da

IEP (calculated)

8.138

GRAVY (calculated)

-0.366

Length

469 amino acids

Sequence
(BLAST)

001: MKLLSEKATC NSHGQDSSYF LGWQEYEKNP YDEIQNPKGI IQMGLAENQL SFDLLESWLA QNPDAAGFKR NGESIFRELA LFQDYHGLPA FKNAMTKFMS
101: EIRGNRVSFD SNNLVLTAGA TSANETLMFC LANQGDAFLL PTPYYPGFDR DLKWRTGAEI VPIHCSSSNG FRITESALEE AYLDAKKRNL KVKGVLVTNP
201: SNPLGTTLNR NELELLLTFI DEKGIHLISD EIYSGTVFNS PGFVSVMEVL IEKNYMKTRV WERVHIVYSL SKDLGLPGFR IGAIYSNDEM VVSAATKMSS
301: FGLVSSQTQY LLSCMLSDKK FTKKYISENQ KRLKKRHAML VKGLKSAGIN CLESNAGLFC WVDMRHLLSS NNFDAEMDLW KKIVYDVGLN ISPGSSCHCT
401: EPGWFRVCFA NMSEDTLDLA MRRIKDFVES TAPNATNHQN QQQSNANSKK KSFSKWVFRL SFNDRQRER

Best Arabidopsis Sequence Match ( AT4G37770.1 )
(BLAST)

001: MGLLSKKASC NTHGQDSSYF WGWEEYEKNP YDEIKNPDGI IQMGLAENQL SFDLIESWLA KNPDAANFQR EGQSIFRELA LFQDYHGLPS FKNAMADFMS
101: ENRGNRVSFN PNKLVLTAGA TPANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIQCKSANG FRITKVALEE AYEQAQKLNL KVKGVLITNP
201: SNPLGTTTTR TELNHLLDFI SRKKIHLISD EIYSGTVFTN PGFISVMEVL KDRKLENTDV FDRVHIVYSL SKDLGLPGFR VGVIYSNDDF VVSAATKMSS
301: FGLISSQTQY LLSALLSDKT FTKNYLEENQ IRLKNRHKKL VSGLEAAGIE CLKSNAGLFC WVDMRHLLKS NTFEAEIELW KKIVYEVKLN ISPGSSCHCN
401: EPGWFRVCFA NLSEETLKVA LDRLKRFVDG PSPTRRSQSE HQRLKNLRKM KVSNWVFRLS FHDREPEER

Arabidopsis Description

ACS81-aminocyclopropane-1-carboxylate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q56Y32]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.