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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012924.1-P Field mustard cytosol 100.0 100.0
CDY23035 Canola cytosol 98.51 99.36
CDY08163 Canola cytosol 98.51 98.51
CDY05953 Canola cytosol 98.3 98.3
AT3G49700.1 Thale cress cytosol 97.66 97.66
CDY18674 Canola cytosol 85.32 91.34
CDX81296 Canola cytosol 85.32 91.34
CDX75675 Canola cytosol 76.6 79.82
CDY66472 Canola cytosol 68.3 79.65
CDX69326 Canola cytosol 78.94 79.1
CDY69462 Canola cytosol 76.81 76.97
VIT_00s0840g00010.t01 Wine grape cytosol 75.11 75.27
VIT_00s1437g00010.t01 Wine grape cytosol 74.89 75.05
PGSC0003DMT400055203 Potato cytosol 73.62 73.77
CDY25639 Canola cytosol 74.26 73.63
Solyc02g091990.2.1 Tomato cytosol 73.4 73.56
KRH77167 Soybean cytosol 73.4 73.4
Solyc02g063540.1.1 Tomato cytosol 44.26 73.24
KRH28319 Soybean cytosol 73.19 73.04
CDX89520 Canola cytosol 73.62 73.0
KRH04373 Soybean cytosol 73.62 72.84
PGSC0003DMT400008587 Potato cytosol 71.06 72.45
PGSC0003DMT400008605 Potato cytosol 64.26 71.39
Solyc03g043890.2.1 Tomato cytosol 71.49 71.34
KRH58165 Soybean cytosol 72.55 71.04
PGSC0003DMT400013977 Potato cytosol 56.17 70.78
GSMUA_Achr2P08600_001 Banana cytosol 69.57 70.63
GSMUA_Achr3P25830_001 Banana mitochondrion 67.45 70.6
GSMUA_Achr1P14280_001 Banana nucleus 68.3 70.24
GSMUA_Achr5P08880_001 Banana cytosol 68.72 69.31
GSMUA_Achr4P01340_001 Banana mitochondrion 66.6 67.75
GSMUA_Achr1P04420_001 Banana cytosol 66.38 67.53
CDY34015 Canola cytosol 64.89 65.73
CDX83146 Canola cytosol 64.47 65.3
TraesCS4B01G058200.1 Wheat cytosol 64.68 62.68
Zm00001d033862_P001 Maize cytosol 64.47 62.47
TraesCS4A01G256500.1 Wheat cytosol 64.47 62.47
TraesCS4D01G058200.1 Wheat cytosol 63.83 61.86
Os03t0727600-01 Rice cytosol 63.83 61.6
EER90948 Sorghum cytosol 64.68 61.17
CDY72652 Canola cytosol 24.04 56.22
CDX89355 Canola cytosol 53.4 56.03
CDY71142 Canola cytosol 53.4 56.03
CDY42751 Canola cytosol 53.62 55.88
CDX94359 Canola cytosol 52.98 55.58
CDX92755 Canola cytosol 47.66 53.85
HORVU4Hr1G009800.5 Barley cytosol, plastid 63.62 52.36
CDY15174 Canola cytosol 52.77 50.0
CDY11360 Canola cytosol 50.21 49.89
CDY65356 Canola cytosol 50.0 49.68
CDX90035 Canola cytosol 47.02 49.44
CDX86796 Canola cytosol 50.43 48.57
CDY13251 Canola cytosol 50.21 48.07
CDY43579 Canola cytosol, mitochondrion, plastid 16.17 39.58
CDX91604 Canola mitochondrion, plastid 41.49 39.0
CDY46931 Canola mitochondrion, plastid 41.49 39.0
CDY45474 Canola cytosol 37.45 33.65
CDY45965 Canola cytosol 37.87 32.78
CDX68271 Canola mitochondrion 6.6 24.22
CDX91708 Canola peroxisome 18.51 21.59
CDY25780 Canola peroxisome 18.09 21.09
CDY04729 Canola cytosol 20.43 20.08
CDY41452 Canola peroxisome 20.43 20.08
CDY44130 Canola cytosol 20.43 20.08
CDY50645 Canola cytosol 9.15 19.91
CDY66294 Canola cytosol 19.79 19.33
CDY61225 Canola peroxisome 19.57 19.13
CDX83914 Canola mitochondrion 21.06 18.3
CDY21752 Canola mitochondrion 21.06 18.1
CDX96776 Canola mitochondrion 20.85 18.08
CDY26256 Canola mitochondrion 20.64 18.06
CDX81815 Canola mitochondrion 21.06 18.03
CDY48485 Canola plastid 20.64 17.96
CDY12474 Canola peroxisome, plastid 19.36 16.95
CDX86159 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 4.47 16.03
CDX88411 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 4.47 16.03
CDX91589 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 4.47 16.03
CDY03822 Canola cytosol 4.04 14.73
CDX68272 Canola nucleus 3.4 14.41
CDX83913 Canola cytosol, nucleus, peroxisome 3.83 14.06
CDY25781 Canola cytosol 1.7 13.79
CDX86161 Canola cytosol 3.4 12.12
Protein Annotations
MapMan:11.5.1.1Gene3D:3.40.640.10Gene3D:3.90.1150.10GO:A0A078ELQ4InterPro:Aminotransferase_I/IIEnsemblPlants:CDY02111
ProteinID:CDY02111ProteinID:CDY02111.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0030170EnsemblPlantsGene:GSBRNA2T00113498001InterPro:IPR015421InterPro:IPR015422
InterPro:NHTrfase_class1_PyrdxlP-BSPFAM:PF00155PRINTS:PR00753ScanProsite:PS00105PANTHER:PTHR43795PANTHER:PTHR43795:SF10
InterPro:PyrdxlP-dep_TrfaseInterPro:PyrdxlP-dep_Trfase_dom1InterPro:PyrdxlP-dep_Trfase_majorSUPFAM:SSF53383UniParc:UPI00025405E9SEG:seg
Description
BnaA03g40560D
Coordinates
chrLK031932:+:189083..190777
Molecular Weight (calculated)
53128.6 Da
IEP (calculated)
7.179
GRAVY (calculated)
-0.303
Length
470 amino acids
Sequence
(BLAST)
001: MKQLSTKVTS NAHGQDSSYF LGWEEYEKNP YDEIKNPNGI IQMGLAENQL CFDLIETWLA KNPDAAGLKK DGQSIFKELA LFQDYHGLPE FKKALAEFME
101: EIRGNRVTFD PSKIVLAAGS TSANETLMFC LAEPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIHCSSSNG FQITESALQQ AYQQAQKLDL KVKGVLVTNP
201: SNPLGTMLTR RELNLLVDFI TSKNIHLISD EIYSGTVFGF EQFVSVMDVL KDKKLENSEV SKRVHVVYSL SKDLGLPGFR VGAIYSNDEM VVSAATKMSS
301: FGLVSSQTQY LLSALLSDKK FTGTYLNENQ KRLKIRQKQL VSGLEAAGVT CLKSNAGLFC WVDMRHLLDT NTFEAELELW KKIVYEVKLN ISPGSSCHCT
401: EPGWFRVCFA NMSEETLDLA MKRLKEYVES TDSRRLISKS SHERIKSLRK RTVSNWVFRV SWTDRVPDER
Best Arabidopsis Sequence Match ( AT3G49700.1 )
(BLAST)
001: MKQLSRKVTS NAHGQDSSYF LGWEEYEKNP YDEIKNPNGI IQMGLAENQL CFDLIETWLA KNPDAAGLKK DGQSIFKELA LFQDYHGLPE FKKALAEFME
101: EIRGNRVTFD PSKIVLAAGS TSANETLMFC LAEPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIHCSSSNG FQITESALQQ AYQQAQKLDL KVKGVLVTNP
201: SNPLGTMLTR RELNLLVDFI TSKNIHLISD EIYSGTVFGF EQFVSVMDVL KDKNLENSEV SKRVHIVYSL SKDLGLPGFR VGAIYSNDEM VVSAATKMSS
301: FGLVSSQTQY LLSALLSDKK FTSTYLDENQ KRLKIRQKKL VSGLEAAGIT CLKSNAGLFC WVDMRHLLDT NTFEAELELW KKIVYDVKLN ISPGSSCHCT
401: EPGWFRVCFA NMSEDTLDLA MKRLKEYVES TDSRRVISKS SHDRIKSLRK RTVSNWVFRV SWTDRVPDER
Arabidopsis Description
ACS91-aminocyclopropane-1-carboxylate synthase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2Y8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.