Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0617800-01 | Rice | mitochondrion | 48.44 | 18.84 |
| CDX91589 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 17.97 | 17.56 |
| CDX88411 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 17.97 | 17.56 |
| CDX86159 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 17.97 | 17.56 |
| TraesCS1D01G086700.1 | Wheat | cytosol | 49.22 | 15.67 |
| CDX96776 | Canola | mitochondrion | 62.5 | 14.76 |
| CDX83914 | Canola | mitochondrion | 60.94 | 14.42 |
| CDX81815 | Canola | mitochondrion | 61.72 | 14.39 |
| CDY21752 | Canola | mitochondrion | 60.94 | 14.26 |
| CDY26256 | Canola | mitochondrion | 59.38 | 14.15 |
| CDY48485 | Canola | plastid | 58.59 | 13.89 |
| GSMUA_Achr2P07320_001 | Banana | cytosol | 52.34 | 13.76 |
| TraesCS1A01G085600.1 | Wheat | cytosol, golgi | 50.0 | 13.28 |
| TraesCS1B01G102700.1 | Wheat | golgi, plastid | 50.0 | 13.28 |
| GSMUA_Achr11P... | Banana | mitochondrion | 50.78 | 12.8 |
| Os10t0390500-01 | Rice | cytosol, plasma membrane, plastid | 47.66 | 12.63 |
| Zm00001d030557_P001 | Maize | cytosol, extracellular | 46.88 | 12.45 |
| Zm00001d022152_P001 | Maize | mitochondrion | 52.34 | 12.38 |
| KXG38638 | Sorghum | cytosol | 46.88 | 12.15 |
| GSMUA_Achr10P... | Banana | mitochondrion | 49.22 | 12.05 |
| EER99708 | Sorghum | mitochondrion | 50.0 | 11.83 |
| TraesCS2A01G167500.1 | Wheat | mitochondrion | 48.44 | 11.15 |
| TraesCS2D01G175200.1 | Wheat | golgi | 48.44 | 11.13 |
| TraesCS2B01G193600.1 | Wheat | mitochondrion | 48.44 | 11.05 |
| Os03t0183600-00 | Rice | extracellular | 41.41 | 10.91 |
| HORVU2Hr1G030820.1 | Barley | mitochondrion | 46.88 | 10.77 |
| Zm00001d006875_P001 | Maize | plastid | 46.09 | 10.55 |
| CDX91708 | Canola | peroxisome | 32.81 | 10.42 |
| CDY25780 | Canola | peroxisome | 32.03 | 10.17 |
| HORVU1Hr1G018540.17 | Barley | cytosol, golgi, plastid | 42.97 | 9.77 |
| CDY41452 | Canola | peroxisome | 34.38 | 9.21 |
| CDY04729 | Canola | cytosol | 34.38 | 9.21 |
| CDY44130 | Canola | cytosol | 34.38 | 9.21 |
| CDY66294 | Canola | cytosol | 34.38 | 9.15 |
| CDY61225 | Canola | peroxisome | 33.59 | 8.94 |
| Os10t0390701-00 | Rice | cytosol | 7.03 | 8.33 |
| Zm00001d032984_P001 | Maize | mitochondrion | 21.09 | 8.26 |
| CDY12474 | Canola | peroxisome, plastid | 34.38 | 8.19 |
| CDX68271 | Canola | mitochondrion | 6.25 | 6.25 |
| Zm00001d014258_P002 | Maize | cytosol | 42.97 | 6.22 |
| Zm00001d008277_P001 | Maize | cytosol | 17.19 | 5.16 |
| CDX92755 | Canola | cytosol | 15.62 | 4.81 |
| CDX69326 | Canola | cytosol | 16.41 | 4.48 |
| CDX75675 | Canola | cytosol | 15.62 | 4.43 |
| CDY42751 | Canola | cytosol | 15.62 | 4.43 |
| CDY45474 | Canola | cytosol | 17.97 | 4.4 |
| CDX90035 | Canola | cytosol | 14.84 | 4.25 |
| CDY71142 | Canola | cytosol | 14.84 | 4.24 |
| CDX94359 | Canola | cytosol | 14.84 | 4.24 |
| CDX89355 | Canola | cytosol | 14.84 | 4.24 |
| CDY45965 | Canola | cytosol | 17.97 | 4.24 |
| CDX89520 | Canola | cytosol | 15.62 | 4.22 |
| CDY46931 | Canola | mitochondrion, plastid | 16.41 | 4.2 |
| CDX91604 | Canola | mitochondrion, plastid | 16.41 | 4.2 |
| CDX81296 | Canola | cytosol | 14.06 | 4.1 |
| CDY18674 | Canola | cytosol | 14.06 | 4.1 |
| CDY69462 | Canola | cytosol | 14.84 | 4.05 |
| CDY65356 | Canola | cytosol | 14.84 | 4.02 |
| CDY25639 | Canola | cytosol | 14.84 | 4.01 |
| CDY34015 | Canola | cytosol | 14.06 | 3.88 |
| CDX83146 | Canola | cytosol | 14.06 | 3.88 |
| CDY23035 | Canola | cytosol | 14.06 | 3.86 |
| CDY15174 | Canola | cytosol | 14.84 | 3.83 |
| CDY02111 | Canola | cytosol | 14.06 | 3.83 |
| CDY08163 | Canola | cytosol | 14.06 | 3.83 |
| CDY05953 | Canola | cytosol | 14.06 | 3.83 |
| CDY11360 | Canola | cytosol | 14.06 | 3.81 |
| CDY25781 | Canola | cytosol | 1.56 | 3.45 |
| CDY43579 | Canola | cytosol, mitochondrion, plastid | 4.69 | 3.12 |
| CDX86796 | Canola | cytosol | 10.94 | 2.87 |
| CDY13251 | Canola | cytosol | 10.94 | 2.85 |
| CDY66472 | Canola | cytosol | 8.59 | 2.73 |
| Zm00001d044135_P001 | Maize | cytosol | 0.78 | 1.79 |
| CDY03822 | Canola | cytosol | 1.56 | 1.55 |
| Zm00001d003953_P001 | Maize | cytosol | 0.78 | 1.12 |
| CDY72652 | Canola | cytosol | 1.56 | 1.0 |
| CDY50645 | Canola | cytosol | 1.56 | 0.93 |
| CDX86161 | Canola | cytosol | 0.0 | 0.0 |
| CDX68272 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX83913 | EnsemblPlantsGene:GSBRNA2T00139689001 | Gene3D:3.90.1150.10 | GO:A0A078D990 | GO:GO:0003674 | GO:GO:0003824 |
| InterPro:IPR015422 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | PANTHER:PTHR11751 | PANTHER:PTHR11751:SF29 | ProteinID:CDX83913 |
| ProteinID:CDX83913.1 | SUPFAM:SSF53383 | UniParc:UPI0004EDED69 | MapMan:35.1 | : | : |
Description
BnaC08g17320D
Coordinates
chrLK031834:-:1193581..1194502
Molecular Weight (calculated)
14908.1 Da
IEP (calculated)
7.862
GRAVY (calculated)
-0.156
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFRRVISED LFRRYVCYDS YIAEKEGILS SLDFSKVCKE QKELCIYSLA LTFHKRPLQL QKLQSPDALY CQGLLNAIGI VVVPGSGFRQ VPGTWHFRCT
101: ILPQEDKIPA IVNRLTEFHE SFMDEFRN
101: ILPQEDKIPA IVNRLTEFHE SFMDEFRN
001: MRRFLINQAK GLVDHSRRQH HHKSPSFLSP QPRPLASSPP ALSRFFSSTS EMSASDSTSS LPVTLDSINP KVLKCEYAVR GEIVNIAQKL QEDLKTNKDA
101: YPFDEIIYCN IGNPQSLGQL PIKFFREVLA LCDHASLLDE SETHGLFSTD SIDRAWRILD HIPGRATGAY SHSQGIKGLR DVIAAGIEAR DGFPADPNDI
201: FLTDGASPAV HMMMQLLLSS EKDGILSPIP QYPLYSASIA LHGGSLVPYY LDEATGWGLE ISDLKKQLEE ARSKGISVRA LVVINPGNPT GQVLAEENQR
301: DIVNFCKQEG LVLLADEVYQ ENVYVPDKKF HSFKKVARSL GYGEKDISLV SFQSVSKGYY GECGKRGGYM EVTGFTSDVR EQIYKMASVN LCSNISGQIL
401: ASLVMSPPKP GDDSYDSYMA ERDGILSSMA KRAKTLEDAL NSLEGVTCNR AEGAMYLFPR INLPQKAIEA AEAEKTAPDA FYCKRLLNAT GVVVVPGSGF
501: GQVPGTWHFR CTILPQEDKI PAIVNRLTEF HKSFMDEFRN
101: YPFDEIIYCN IGNPQSLGQL PIKFFREVLA LCDHASLLDE SETHGLFSTD SIDRAWRILD HIPGRATGAY SHSQGIKGLR DVIAAGIEAR DGFPADPNDI
201: FLTDGASPAV HMMMQLLLSS EKDGILSPIP QYPLYSASIA LHGGSLVPYY LDEATGWGLE ISDLKKQLEE ARSKGISVRA LVVINPGNPT GQVLAEENQR
301: DIVNFCKQEG LVLLADEVYQ ENVYVPDKKF HSFKKVARSL GYGEKDISLV SFQSVSKGYY GECGKRGGYM EVTGFTSDVR EQIYKMASVN LCSNISGQIL
401: ASLVMSPPKP GDDSYDSYMA ERDGILSSMA KRAKTLEDAL NSLEGVTCNR AEGAMYLFPR INLPQKAIEA AEAEKTAPDA FYCKRLLNAT GVVVVPGSGF
501: GQVPGTWHFR CTILPQEDKI PAIVNRLTEF HKSFMDEFRN
Arabidopsis Description
ALAAT2alanine aminotransferase 2 [Source:TAIR;Acc:AT1G72330]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.