Factsheet for TraesCS1D01G086700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G325600.1
TraesCS1B01G338800.1
TraesCS1B01G339000.1
TraesCS1D01G327500.1
TraesCS7A01G562100.1
TraesCS7D01G001000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17290.1	TraesCS1A01G325600.1	AT5G42980.1	15352244
AT1G17290.1	TraesCS1B01G338800.1	AT5G42980.1	15352244
AT1G17290.1	TraesCS1B01G339000.1	AT5G42980.1	15352244
AT1G17290.1	TraesCS1D01G327500.1	AT5G42980.1	15352244
AT1G17290.1	TraesCS7A01G562100.1	AT5G42980.1	15352244
AT1G17290.1	TraesCS7D01G001000.1	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G102700.1	Wheat	golgi, plastid	98.26	81.95
TraesCS1A01G085600.1	Wheat	cytosol, golgi	98.01	81.74
Zm00001d030557_P001	Maize	cytosol, extracellular	89.05	74.27
Os10t0390500-01	Rice	cytosol, plasma membrane, plastid	89.05	74.12
KXG38638	Sorghum	cytosol	89.55	72.87
GSMUA_Achr2P07320_001	Banana	cytosol	82.09	67.76
HORVU1Hr1G018540.17	Barley	cytosol, golgi, plastid	91.79	65.54
PGSC0003DMT400012549	Potato	cytosol, mitochondrion	76.12	62.83
Solyc03g123600.2.1	Tomato	cytosol	74.38	61.78
CDX68271	Canola	mitochondrion	19.65	61.72
VIT_09s0002g00340.t01	Wine grape	mitochondrion	79.35	60.65
KRH06285	Soybean	mitochondrion	77.86	58.4
Bra025984.1-P	Field mustard	cytosol, mitochondrion	77.86	58.29
CDY26256	Canola	mitochondrion	77.61	58.1
KRH47719	Soybean	endoplasmic reticulum	77.86	57.86
CDY48485	Canola	plastid	77.61	57.78
CDX83914	Canola	mitochondrion	77.61	57.67
AT1G17290.1	Thale cress	mitochondrion	77.86	57.64
CDX96776	Canola	mitochondrion	77.36	57.38
Bra016607.1-P	Field mustard	mitochondrion	77.36	57.38
CDY21752	Canola	mitochondrion	77.61	57.04
Bra026675.1-P	Field mustard	mitochondrion	77.61	56.93
CDX81815	Canola	mitochondrion	77.61	56.83
AT1G72330.3	Thale cress	mitochondrion	78.11	56.78
Solyc06g063090.2.1	Tomato	extracellular	76.37	56.64
TraesCS2D01G175200.1	Wheat	golgi	77.86	56.19
TraesCS5D01G070800.1	Wheat	cytosol	66.67	55.14
TraesCS5D01G224200.1	Wheat	cytosol	60.95	49.6
CDX83913	Canola	cytosol, nucleus, peroxisome	15.67	49.22
Solyc03g123610.2.1	Tomato	plastid	71.39	47.36
CDY50645	Canola	cytosol	24.63	45.83
Zm00001d014258_P002	Maize	cytosol	88.31	40.16
TraesCS2D01G262400.2	Wheat	cytosol	49.25	39.68
CDX68272	Canola	nucleus	7.96	28.83
TraesCS3D01G108700.1	Wheat	cytosol, plastid	18.91	16.81
TraesCS7D01G060600.2	Wheat	golgi, mitochondrion	20.9	16.41
TraesCS2D01G394200.1	Wheat	cytosol	19.65	16.26
TraesCS4D01G058200.1	Wheat	cytosol	19.15	15.88
Os10t0390701-00	Rice	cytosol	1.99	7.41

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.3.1.1	InterPro:Aminotransferase_I/II	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0030170	InterPro:IPR015421
InterPro:IPR015422	PFAM:PF00155	PANTHER:PTHR11751	PANTHER:PTHR11751:SF466	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	EnsemblPlantsGene:TraesCS1D01G086700	EnsemblPlants:TraesCS1D01G086700.1	TIGR:cd00609	SEG:seg

Description

No Description!

Coordinates

chr1D:+:71284224..71286783

Molecular Weight (calculated)

43698.4 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.079

Length

402 amino acids

Sequence
(BLAST)

001: MIPDASSCCS ADSISRAKQI LALIPGRATG AYSHSQGIKG LRDAIASGIA SRDGFPANAD DIFLTDGASP GVHLMMQLLI RNEKDGILVP IPQYPLYSAS
101: IALHGGSLVP YYLNESTGWG LEISDVKKQL EDARSRGIDV RALVVINPGN PTGQVLAEEN QYDIVKFCKN EGLVLLADEV YQENIYADNK KFHSFKKIVR
201: SLGYGEEDLP LVSYQSVSKG YYGECGKRGG YMEITGFSAP VREQIYKIAS VNLCSNITGQ ILASLVMNPP KASDESYASY KAEKDGILAS LARRAKALEV
301: AFSKLEGITC NKAEGAMYLF PQICLPQKAI EAAKAANKAP DAFYALRLLE STGIVVVPGS GFGQVPGTWH FRCTILPQEE KIPAIISRFT VFHETFMAEY
401: RD

Best Arabidopsis Sequence Match ( AT1G17290.1 )
(BLAST)

001: MRRFVIGQAK NLIDQSRRRQ LHHHKNLSFV SLIPPFSAPS DSSSRHLSSS SSSDMSASDS SSSLPVTLDT INPKVIKCEY AVRGEIVNIA QKLQEDLKTN
101: KDAYPFDEII YCNIGNPQSL GQQPITFFRE VLALCSYTAL LDESATHGLF SSDSIERAWK ILDQIPGRAT GAYSHSQGIK GLRDAIADGI EARDGFPADP
201: NDIFMTDGAS PGVHMMMQLL ITSEKDGILC PIPQYPLYSA SIALHGGTLV PYYLDEASGW GLEISELKKQ LEDARSKGIT VRALAVINPG NPTGQVLSEE
301: NQRDVVKFCK QEGLVLLADE VYQENVYVPD KKFHSFKKVA RSMGYGEKDL ALVSFQSVSK GYYGECGKRG GYMEVTGFTS DVREQIYKMA SVNLCSNISG
401: QILASLIMSP PKPGDDSYES YIAEKDGILS SLARRAKTLE EALNKLEGVT CNRAEGAMYL FPCLHLPQKA IAAAEAEKTA PDNFYCKRLL KATGIVVVPG
501: SGFRQVPGTW HFRCTILPQE DKIPAIVDRL TAFHQSFMDE FRD

Arabidopsis Description

ALAAT1Alanine aminotransferase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4I7I0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.