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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDY32970
CDY43592

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G17290.1 CDY32970 AT5G42980.1 15352244
AT1G17290.1 CDY43592 AT5G42980.1 15352244
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra025984.1-P Field mustard cytosol, mitochondrion 98.33 98.88
CDY26256 Canola mitochondrion 98.15 98.7
CDY21752 Canola mitochondrion 93.89 92.69
CDX81815 Canola mitochondrion 93.7 92.17
CDX83914 Canola mitochondrion 91.67 91.5
CDX96776 Canola mitochondrion 90.74 90.41
AT1G17290.1 Thale cress mitochondrion 88.15 87.66
PGSC0003DMT400012549 Potato cytosol, mitochondrion 74.63 82.75
Os07t0617800-01 Rice mitochondrion 50.0 82.07
Zm00001d003953_P001 Maize cytosol 13.15 79.78
VIT_09s0002g00340.t01 Wine grape mitochondrion 77.04 79.09
GSMUA_Achr2P07320_001 Banana cytosol 70.93 78.64
TraesCS1D01G086700.1 Wheat cytosol 57.78 77.61
Solyc03g123600.2.1 Tomato cytosol 68.89 76.86
Solyc06g063090.2.1 Tomato extracellular 77.04 76.75
KRH06285 Soybean mitochondrion 76.11 76.68
Zm00001d030557_P001 Maize cytosol, extracellular 68.33 76.56
TraesCS1A01G085600.1 Wheat cytosol, golgi 67.78 75.93
TraesCS1B01G102700.1 Wheat golgi, plastid 67.78 75.93
GSMUA_Achr11P... Banana mitochondrion 71.11 75.59
Os10t0390500-01 Rice cytosol, plasma membrane, plastid 67.59 75.57
KRH47719 Soybean endoplasmic reticulum 75.56 75.42
GSMUA_Achr10P... Banana mitochondrion 72.41 74.76
KXG38638 Sorghum cytosol 68.33 74.7
EER99708 Sorghum mitochondrion 71.67 71.53
Zm00001d044135_P001 Maize cytosol 7.41 71.43
Zm00001d022152_P001 Maize mitochondrion 71.11 70.98
Os03t0183600-00 Rice extracellular 61.85 68.72
CDX68271 Canola mitochondrion 16.11 67.97
TraesCS2D01G175200.1 Wheat golgi 69.63 67.5
HORVU2Hr1G030820.1 Barley mitochondrion 69.44 67.33
TraesCS2A01G167500.1 Wheat mitochondrion 69.26 67.27
TraesCS2B01G193600.1 Wheat mitochondrion 69.81 67.2
Zm00001d006875_P001 Maize plastid 68.33 66.01
Solyc03g123610.2.1 Tomato plastid 71.85 64.03
HORVU1Hr1G018540.17 Barley cytosol, golgi, plastid 66.48 63.77
CDX83913 Canola cytosol, nucleus, peroxisome 13.89 58.59
CDY50645 Canola cytosol 21.67 54.17
CDX91708 Canola peroxisome 38.52 51.61
Zm00001d032984_P001 Maize mitochondrion 31.11 51.38
CDY25780 Canola peroxisome 38.15 51.12
CDY04729 Canola cytosol 45.0 50.84
CDY44130 Canola cytosol 45.0 50.84
CDY41452 Canola peroxisome 44.81 50.63
CDY61225 Canola peroxisome 44.63 50.1
CDY25781 Canola cytosol 5.37 50.0
CDY66294 Canola cytosol 44.26 49.69
CDX86159 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 12.04 49.62
CDX88411 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 12.04 49.62
CDX91589 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 12.04 49.62
CDY12474 Canola peroxisome, plastid 43.52 43.76
Zm00001d014258_P002 Maize cytosol 67.04 40.95
CDX68272 Canola nucleus 8.15 39.64
CDY03822 Canola cytosol 9.26 38.76
Zm00001d008277_P001 Maize cytosol 27.59 34.98
CDX92755 Canola cytosol 18.52 24.04
CDY42751 Canola cytosol 19.44 23.28
CDX89355 Canola cytosol 18.89 22.77
CDY71142 Canola cytosol 18.7 22.54
CDX94359 Canola cytosol 18.7 22.54
CDY72652 Canola cytosol 7.78 20.9
CDY66472 Canola cytosol 15.56 20.84
CDX75675 Canola cytosol 17.41 20.84
CDY05953 Canola cytosol 17.96 20.64
CDY02111 Canola cytosol 17.96 20.64
CDY23035 Canola cytosol 17.78 20.6
CDY08163 Canola cytosol 17.78 20.43
CDX69326 Canola cytosol 17.59 20.26
CDY46931 Canola mitochondrion, plastid 18.7 20.2
CDX91604 Canola mitochondrion, plastid 18.7 20.2
CDY69462 Canola cytosol 17.41 20.04
CDX89520 Canola cytosol 17.59 20.04
CDY11360 Canola cytosol 17.22 19.66
CDY25639 Canola cytosol 17.22 19.62
CDY13251 Canola cytosol 17.59 19.35
CDX86796 Canola cytosol 17.41 19.26
CDY65356 Canola cytosol 16.85 19.24
CDX81296 Canola cytosol 15.56 19.13
CDY18674 Canola cytosol 15.56 19.13
CDY34015 Canola cytosol 16.3 18.97
CDX83146 Canola cytosol 16.11 18.75
CDY45965 Canola cytosol 18.7 18.6
CDY45474 Canola cytosol 17.78 18.36
CDY15174 Canola cytosol 16.85 18.35
CDX90035 Canola cytosol 14.81 17.9
CDX86161 Canola cytosol 4.26 17.42
CDY43579 Canola cytosol, mitochondrion, plastid 5.37 15.1
Os10t0390701-00 Rice cytosol 1.48 7.41
Protein Annotations
Gene3D:3.40.640.10Gene3D:3.90.1150.10MapMan:4.1.3.1.1GO:A0A078IC98UniProt:A0A078IC98InterPro:Aminotransferase_I/II
EnsemblPlants:CDY48485ProteinID:CDY48485ProteinID:CDY48485.1ncoils:CoilGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0030170EnsemblPlantsGene:GSBRNA2T00091180001
InterPro:IPR015421InterPro:IPR015422PFAM:PF00155PANTHER:PTHR11751PANTHER:PTHR11751:SF466InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1InterPro:PyrdxlP-dep_Trfase_majorSUPFAM:SSF53383UniParc:UPI0004EB69DBSEG:seg:
Description
BnaC05g13450DBnaC05g13450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IC98]
Coordinates
chrLK032775:+:102433..105807
Molecular Weight (calculated)
59576.3 Da
IEP (calculated)
6.669
GRAVY (calculated)
-0.241
Length
540 amino acids
Sequence
(BLAST)
001: MRRFVIGQAK NLIDQTRRPR PRPRPHHNNI RLLSPLASDP IPVSSSRFFS DMTGSDSSSS LPVTIDSINP NVLKCEYAVR GEIVNIAQKL QDDLKINKDA
101: YPFDEIIYCN IGNPQSLSQQ PITFFREVLA LCSHTALLDR DETHALFSAD SIARAWKILD QIPGKATGAY SHSQGIKGLR DAIAAGIEAR DGFPADPNDI
201: FMTDGASPGV HMMMQLLISS EKDGILCPIP QYPLYSASIA LHGGSLVPYY LDEASGWGLE ISELKKQLED AKSKGITVRA LAVINPGNPT GQVLSEENQR
301: DIVDFCKKEG LVLLADEVYQ ENVYVPDKKF HSFKKVARSM GYGEKDISIV SFQSISKGYY GECGKRGGYM EVTGFTSDVR EQIYKVASVN LCSNISGQIL
401: ASLVMSPPKP GDESYESYIA EKEGILSSMA RRAKTLEEAL NKLEGITCNR AEGAMYLFPC INLPQKAIAA AEAAKTAPDT FYCKRLLNAT GIVLVPGSGF
501: RQVPGTWHFR CTILPQEDKI PAIVNRLTEF HKSFMDEFRD
Best Arabidopsis Sequence Match ( AT1G17290.1 )
(BLAST)
001: MRRFVIGQAK NLIDQSRRRQ LHHHKNLSFV SLIPPFSAPS DSSSRHLSSS SSSDMSASDS SSSLPVTLDT INPKVIKCEY AVRGEIVNIA QKLQEDLKTN
101: KDAYPFDEII YCNIGNPQSL GQQPITFFRE VLALCSYTAL LDESATHGLF SSDSIERAWK ILDQIPGRAT GAYSHSQGIK GLRDAIADGI EARDGFPADP
201: NDIFMTDGAS PGVHMMMQLL ITSEKDGILC PIPQYPLYSA SIALHGGTLV PYYLDEASGW GLEISELKKQ LEDARSKGIT VRALAVINPG NPTGQVLSEE
301: NQRDVVKFCK QEGLVLLADE VYQENVYVPD KKFHSFKKVA RSMGYGEKDL ALVSFQSVSK GYYGECGKRG GYMEVTGFTS DVREQIYKMA SVNLCSNISG
401: QILASLIMSP PKPGDDSYES YIAEKDGILS SLARRAKTLE EALNKLEGVT CNRAEGAMYL FPCLHLPQKA IAAAEAEKTA PDNFYCKRLL KATGIVVVPG
501: SGFRQVPGTW HFRCTILPQE DKIPAIVDRL TAFHQSFMDE FRD
Arabidopsis Description
ALAAT1Alanine aminotransferase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4I7I0]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.