Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009959.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 100.0 | 38.37 |
| Solyc05g013380.2.1 | Tomato | extracellular, nucleus, plastid | 26.52 | 7.28 |
| PGSC0003DMT400047918 | Potato | cytosol | 26.52 | 7.28 |
| GSMUA_Achr8P15810_001 | Banana | cytosol | 24.24 | 6.65 |
| GSMUA_Achr6P29540_001 | Banana | cytosol | 24.24 | 6.65 |
| CDY25780 | Canola | peroxisome | 19.7 | 6.45 |
| CDX91708 | Canola | peroxisome | 19.7 | 6.45 |
| VIT_00s0225g00130.t01 | Wine grape | cytosol | 23.48 | 6.44 |
| Os07t0108300-01 | Rice | extracellular, nucleus, plasma membrane | 23.48 | 6.39 |
| Solyc01g007940.2.1 | Tomato | cytosol | 22.73 | 6.34 |
| TraesCS2B01G280600.1 | Wheat | plastid | 22.73 | 6.26 |
| TraesCS2A01G261600.1 | Wheat | peroxisome | 22.73 | 6.26 |
| KRH74536 | Soybean | cytosol | 22.73 | 6.24 |
| KRH69622 | Soybean | cytosol | 22.73 | 6.24 |
| CDY04729 | Canola | cytosol | 21.97 | 6.07 |
| CDY44130 | Canola | cytosol | 21.97 | 6.07 |
| KXG34265 | Sorghum | cytosol | 21.97 | 6.07 |
| CDY41452 | Canola | peroxisome | 21.97 | 6.07 |
| AT1G70580.1 | Thale cress | cytosol, nucleus, peroxisome | 21.97 | 6.03 |
| TraesCS2D01G262400.2 | Wheat | cytosol | 22.73 | 6.01 |
| HORVU2Hr1G063740.6 | Barley | peroxisome, vacuole | 21.97 | 5.97 |
| Zm00001d007937_P001 | Maize | mitochondrion | 21.21 | 5.85 |
| CDY66294 | Canola | cytosol | 21.21 | 5.82 |
| CDY61225 | Canola | peroxisome | 21.21 | 5.82 |
| CDY03822 | Canola | cytosol | 5.3 | 5.43 |
| CDY12474 | Canola | peroxisome, plastid | 18.94 | 4.66 |
| CDX83914 | Canola | mitochondrion | 18.94 | 4.62 |
| CDX96776 | Canola | mitochondrion | 18.94 | 4.61 |
| CDY21752 | Canola | mitochondrion | 18.94 | 4.57 |
| CDX81815 | Canola | mitochondrion | 18.94 | 4.55 |
| CDX68272 | Canola | nucleus | 3.79 | 4.5 |
| CDY72652 | Canola | cytosol | 6.82 | 4.48 |
| CDY26256 | Canola | mitochondrion | 17.42 | 4.28 |
| CDY48485 | Canola | plastid | 17.42 | 4.26 |
| CDY50645 | Canola | cytosol | 6.82 | 4.17 |
| CDX91604 | Canola | mitochondrion, plastid | 14.39 | 3.8 |
| CDY46931 | Canola | mitochondrion, plastid | 13.64 | 3.6 |
| CDY34015 | Canola | cytosol | 12.12 | 3.45 |
| CDY23035 | Canola | cytosol | 12.12 | 3.43 |
| CDX81296 | Canola | cytosol | 11.36 | 3.42 |
| CDY18674 | Canola | cytosol | 11.36 | 3.42 |
| CDY02111 | Canola | cytosol | 12.12 | 3.4 |
| CDY05953 | Canola | cytosol | 12.12 | 3.4 |
| CDY08163 | Canola | cytosol | 12.12 | 3.4 |
| CDX75675 | Canola | cytosol | 11.36 | 3.33 |
| CDX90035 | Canola | cytosol | 10.61 | 3.13 |
| CDX83146 | Canola | cytosol | 10.61 | 3.02 |
| CDX69326 | Canola | cytosol | 10.61 | 2.99 |
| CDY66472 | Canola | cytosol | 9.09 | 2.98 |
| CDX89520 | Canola | cytosol | 10.61 | 2.95 |
| CDY25639 | Canola | cytosol | 10.61 | 2.95 |
| CDY42751 | Canola | cytosol | 9.85 | 2.88 |
| CDX86796 | Canola | cytosol | 10.61 | 2.87 |
| CDY13251 | Canola | cytosol | 10.61 | 2.85 |
| CDY15174 | Canola | cytosol | 10.61 | 2.82 |
| CDY69462 | Canola | cytosol | 9.85 | 2.77 |
| CDY45965 | Canola | cytosol | 11.36 | 2.76 |
| CDY11360 | Canola | cytosol | 9.85 | 2.75 |
| CDY65356 | Canola | cytosol | 9.85 | 2.75 |
| CDX94359 | Canola | cytosol | 9.09 | 2.68 |
| CDY71142 | Canola | cytosol | 9.09 | 2.68 |
| CDX89355 | Canola | cytosol | 9.09 | 2.68 |
| CDY45474 | Canola | cytosol | 10.61 | 2.68 |
| CDX92755 | Canola | cytosol | 7.58 | 2.4 |
| CDY25781 | Canola | cytosol | 0.76 | 1.72 |
| CDY43579 | Canola | cytosol, mitochondrion, plastid | 1.52 | 1.04 |
| PGSC0003DMT400042202 | Potato | cytosol, mitochondrion, peroxisome, plastid | 0.0 | 0.0 |
| CDX91589 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 0.0 | 0.0 |
| CDX68271 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX88411 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 0.0 | 0.0 |
| CDX86159 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 0.0 | 0.0 |
| CDX83913 | Canola | cytosol, nucleus, peroxisome | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX86161 | EnsemblPlantsGene:GSBRNA2T00144221001 | ProteinID:CDX86161 | ProteinID:CDX86161.1 | UniParc:UPI0004EE99BD | MapMan:35.2 |
Description
BnaA06g28780D
Coordinates
chrLK031845:-:90472..90870
Molecular Weight (calculated)
13365.7 Da
IEP (calculated)
10.587
GRAVY (calculated)
-0.442
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVSGVTDSV RRNDDAAIPS DSVKPVSQIG VSSGNDGPTN DGLMKSKSRT AATKSPNKPV AKTGISSGVE NPVKSRGATV VSQSPIKTHS KSGASSGPVI
101: GVRGRSSVAS VDKGKSIVSD DVGKVITFKD EL
101: GVRGRSSVAS VDKGKSIVSD DVGKVITFKD EL
001: MMISNLLACK FSEVSSMHRL LVLCCITDCF SEPATRPHKS PPQTIQTPTP ARSHSQSGSQ QPPLIRRKQQ QPLACQHQIP YLQEQPSQDP PETQFIPNHQ
101: NPNNHEEEDG EEDGDEFKEE DGEEVDEEEQ NPNVDYQELL DRLLALPGRQ HLMILSQEPI P
101: NPNNHEEEDG EEDGDEFKEE DGEEVDEEEQ NPNVDYQELL DRLLALPGRQ HLMILSQEPI P
Arabidopsis Description
Hydroxyproline-rich glycoprotein family protein [Source:UniProtKB/TrEMBL;Acc:F4KIN3]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.