Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- peroxisome 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G23310.1 | CDY32970 | AT5G42980.1 | 15352244 |
| AT1G23310.1 | CDY43592 | AT5G42980.1 | 15352244 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024580.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY04729 | Canola | cytosol | 100.0 | 100.0 |
| CDX91708 | Canola | peroxisome | 82.22 | 97.52 |
| CDY41452 | Canola | peroxisome | 97.07 | 97.07 |
| CDY25780 | Canola | peroxisome | 81.38 | 96.53 |
| AT1G23310.1 | Thale cress | cytosol | 94.77 | 94.18 |
| CDY25781 | Canola | cytosol | 11.3 | 93.1 |
| CDY61225 | Canola | peroxisome | 93.51 | 92.93 |
| CDY66294 | Canola | cytosol | 92.47 | 91.89 |
| CDX86159 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 25.1 | 91.6 |
| CDX91589 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 25.1 | 91.6 |
| CDX88411 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 25.1 | 91.6 |
| PGSC0003DMT400042202 | Potato | cytosol, mitochondrion, peroxisome, plastid | 15.48 | 87.06 |
| VIT_00s0225g00130.t01 | Wine grape | cytosol | 87.45 | 86.9 |
| KRH69622 | Soybean | cytosol | 85.77 | 85.24 |
| PGSC0003DMT400047918 | Potato | cytosol | 85.77 | 85.24 |
| Solyc05g013380.2.1 | Tomato | extracellular, nucleus, plastid | 85.56 | 85.03 |
| KRH74536 | Soybean | cytosol | 85.36 | 84.82 |
| Solyc01g007940.2.1 | Tomato | cytosol | 83.68 | 84.57 |
| GSMUA_Achr6P29540_001 | Banana | cytosol | 84.94 | 84.41 |
| GSMUA_Achr8P15810_001 | Banana | cytosol | 84.52 | 83.99 |
| TraesCS2A01G261600.1 | Wheat | peroxisome | 83.47 | 83.3 |
| TraesCS2B01G280600.1 | Wheat | plastid | 83.47 | 83.3 |
| CDY12474 | Canola | peroxisome, plastid | 93.51 | 83.24 |
| Os07t0108300-01 | Rice | extracellular, nucleus, plasma membrane | 84.31 | 83.09 |
| KXG34265 | Sorghum | cytosol | 80.96 | 80.96 |
| Zm00001d007937_P001 | Maize | mitochondrion | 80.75 | 80.58 |
| HORVU2Hr1G063740.6 | Barley | peroxisome, vacuole | 80.75 | 79.42 |
| TraesCS2D01G262400.2 | Wheat | cytosol | 78.24 | 74.95 |
| CDY03822 | Canola | cytosol | 13.18 | 48.84 |
| CDX83914 | Canola | mitochondrion | 51.46 | 45.47 |
| CDY26256 | Canola | mitochondrion | 51.05 | 45.44 |
| CDX96776 | Canola | mitochondrion | 51.46 | 45.39 |
| CDX68271 | Canola | mitochondrion | 12.13 | 45.31 |
| CDY48485 | Canola | plastid | 50.84 | 45.0 |
| CDY21752 | Canola | mitochondrion | 51.05 | 44.61 |
| CDX81815 | Canola | mitochondrion | 51.05 | 44.44 |
| CDY50645 | Canola | cytosol | 17.36 | 38.43 |
| CDX83913 | Canola | cytosol, nucleus, peroxisome | 9.21 | 34.38 |
| CDX68272 | Canola | nucleus | 7.11 | 30.63 |
| CDX86161 | Canola | cytosol | 6.07 | 21.97 |
| CDY71142 | Canola | cytosol | 20.29 | 21.65 |
| CDX94359 | Canola | cytosol | 20.08 | 21.43 |
| CDX89355 | Canola | cytosol | 19.87 | 21.21 |
| CDX92755 | Canola | cytosol | 18.41 | 21.15 |
| CDY42751 | Canola | cytosol | 19.87 | 21.06 |
| CDY05953 | Canola | cytosol | 20.29 | 20.64 |
| CDY08163 | Canola | cytosol | 20.08 | 20.43 |
| CDY02111 | Canola | cytosol | 20.08 | 20.43 |
| CDY66472 | Canola | cytosol | 17.15 | 20.35 |
| CDY23035 | Canola | cytosol | 19.67 | 20.17 |
| CDX75675 | Canola | cytosol | 18.83 | 19.96 |
| CDY72652 | Canola | cytosol | 8.37 | 19.9 |
| CDX69326 | Canola | cytosol | 19.25 | 19.62 |
| CDX89520 | Canola | cytosol | 19.25 | 19.41 |
| CDY25639 | Canola | cytosol | 19.25 | 19.41 |
| CDY13251 | Canola | cytosol | 19.87 | 19.35 |
| CDX86796 | Canola | cytosol | 19.67 | 19.26 |
| CDY65356 | Canola | cytosol | 19.04 | 19.24 |
| CDX81296 | Canola | cytosol | 17.57 | 19.13 |
| CDY18674 | Canola | cytosol | 17.57 | 19.13 |
| CDY69462 | Canola | cytosol | 18.62 | 18.98 |
| CDY11360 | Canola | cytosol | 18.62 | 18.82 |
| CDY34015 | Canola | cytosol | 17.99 | 18.53 |
| CDX83146 | Canola | cytosol | 17.99 | 18.53 |
| CDX91604 | Canola | mitochondrion, plastid | 19.25 | 18.4 |
| CDY46931 | Canola | mitochondrion, plastid | 19.25 | 18.4 |
| CDX90035 | Canola | cytosol | 16.95 | 18.12 |
| CDY15174 | Canola | cytosol | 18.62 | 17.94 |
| CDY45965 | Canola | cytosol | 19.46 | 17.13 |
| CDY45474 | Canola | cytosol | 18.41 | 16.83 |
| CDY43579 | Canola | cytosol, mitochondrion, plastid | 6.07 | 15.1 |
Protein Annotations
| MapMan:1.3.3.1 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | GO:A0A078HZT2 | UniProt:A0A078HZT2 | InterPro:Aminotransferase_I/II |
| EnsemblPlants:CDY44130 | ProteinID:CDY44130 | ProteinID:CDY44130.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0030170 | EnsemblPlantsGene:GSBRNA2T00079579001 | InterPro:IPR015421 |
| InterPro:IPR015422 | PFAM:PF00155 | PANTHER:PTHR11751 | PANTHER:PTHR11751:SF373 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 |
| InterPro:PyrdxlP-dep_Trfase_major | SUPFAM:SSF53383 | UniParc:UPI00025429F8 | : | : | : |
Description
BnaA09g31220DBnaA09g31220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZT2]
Coordinates
chrLK032580:-:6616..9718
Molecular Weight (calculated)
53072.0 Da
IEP (calculated)
6.666
GRAVY (calculated)
-0.198
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEYESLNE NVKKCQYAVR GELYLRASEL QKEGKKIIFT NVGNPHALGQ KPLTFPRQVV ALCQAPFLLD DPNVGMIFPA DAIARAKHYL SLTSGGLGAY
101: SDSRGLPGVR KEVAEFIQRR DGYPSDPELI FLTDGASKGV MQILNCVIRG ERDGILVPVP QYPLYSATIS LLGGSLVPYY LDESENWGLD VNNLRQSVAQ
201: ARSQGISVRA MVIINPGNPT GQCLSEANLR EILRFCHSEK LVLLGDEVYQ QNIYQDERPF ISSKKVLMDM GSPFSKEVQL VSFHTVSKGY WGECGQRGGY
301: FEMTNFPPRV VEEIYKVASI ALSPNVSAQI FMGLMVSPPK PGDISYDQFA RESKGILESL RRRAKIMTDG FNSCKNVVCN FTEGAMYSFP QIKLPPGALQ
401: AAKQAGKVPD VFYCLKLLEA TGISTVPGSG FGQKEGVFHL RTTILPAEEE MPEIMDSFKK FNDEFMTQYE NSFGYSRM
101: SDSRGLPGVR KEVAEFIQRR DGYPSDPELI FLTDGASKGV MQILNCVIRG ERDGILVPVP QYPLYSATIS LLGGSLVPYY LDESENWGLD VNNLRQSVAQ
201: ARSQGISVRA MVIINPGNPT GQCLSEANLR EILRFCHSEK LVLLGDEVYQ QNIYQDERPF ISSKKVLMDM GSPFSKEVQL VSFHTVSKGY WGECGQRGGY
301: FEMTNFPPRV VEEIYKVASI ALSPNVSAQI FMGLMVSPPK PGDISYDQFA RESKGILESL RRRAKIMTDG FNSCKNVVCN FTEGAMYSFP QIKLPPGALQ
401: AAKQAGKVPD VFYCLKLLEA TGISTVPGSG FGQKEGVFHL RTTILPAEEE MPEIMDSFKK FNDEFMTQYE NSFGYSRM
001: MALKALDYDT LNENVKKCQY AVRGELYLRA SELQKEGKKI IFTNVGNPHA LGQKPLTFPR QVVALCQAPF LLDDPNVGML FPADAIARAK HYLSLTSGGL
101: GAYSDSRGLP GVRKEVAEFI QRRDGYPSDP ELIFLTDGAS KGVMQILNCV IRGNGDGILV PVPQYPLYSA TISLLGGTLV PYYLDESENW GLDVANLRQS
201: VAQARSQGIT VRAMVIINPG NPTGQCLSEA NIREILKFCY NEKLVLLGDE VYQQNIYQDE RPFISSKKVL MEMGSPFSKE VQLVSFHTVS KGYWGECGQR
301: GGYFEMTNLP PRVVEEIYKV ASIALSPNVS AQIFMGLMVN PPKPGDISYD QFARESKGIL ESLRRRARLM TDGFNSCKNV VCNFTEGAMY SFPQIRLPTG
401: ALQAAKQAGK VPDVFYCLKL LEATGISTVP GSGFGQKEGV FHLRTTILPA EDEMPEIMDS FKKFNDEFMT QYDNNFGYSK M
101: GAYSDSRGLP GVRKEVAEFI QRRDGYPSDP ELIFLTDGAS KGVMQILNCV IRGNGDGILV PVPQYPLYSA TISLLGGTLV PYYLDESENW GLDVANLRQS
201: VAQARSQGIT VRAMVIINPG NPTGQCLSEA NIREILKFCY NEKLVLLGDE VYQQNIYQDE RPFISSKKVL MEMGSPFSKE VQLVSFHTVS KGYWGECGQR
301: GGYFEMTNLP PRVVEEIYKV ASIALSPNVS AQIFMGLMVN PPKPGDISYD QFARESKGIL ESLRRRARLM TDGFNSCKNV VCNFTEGAMY SFPQIRLPTG
401: ALQAAKQAGK VPDVFYCLKL LEATGISTVP GSGFGQKEGV FHLRTTILPA EDEMPEIMDS FKKFNDEFMT QYDNNFGYSK M
Arabidopsis Description
GGAT1Glutamate--glyoxylate aminotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR30]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.