Factsheet for HORVU2Hr1G063740.6

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole

Predictor Summary:

plastid 1
peroxisome 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, vacuole
Any Predictor:	peroxisome, plastid, vacuole
iPSORT:	plastid
MultiLoc:	peroxisome
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G075560.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G23310.1	HORVU1Hr1G075560.1	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G261600.1	Wheat	peroxisome	94.03	95.41
TraesCS2B01G280600.1	Wheat	plastid	93.83	95.2
Os07t0108300-01	Rice	extracellular, nucleus, plasma membrane	86.42	86.6
TraesCS2D01G262400.2	Wheat	cytosol	87.24	84.97
Zm00001d007937_P001	Maize	mitochondrion	83.13	84.34
KXG34265	Sorghum	cytosol	82.1	83.47
GSMUA_Achr6P29540_001	Banana	cytosol	82.51	83.37
VIT_00s0225g00130.t01	Wine grape	cytosol	81.89	82.74
CDX91708	Canola	peroxisome	67.7	81.64
GSMUA_Achr8P15810_001	Banana	cytosol	80.66	81.5
CDY25780	Canola	peroxisome	67.49	81.39
CDY61225	Canola	peroxisome	80.25	81.08
Bra016202.1-P	Field mustard	cytosol	80.25	80.91
Bra024580.1-P	Field mustard	cytosol	79.42	80.75
CDY04729	Canola	cytosol	79.42	80.75
CDY44130	Canola	cytosol	79.42	80.75
KRH69622	Soybean	cytosol	79.84	80.67
Bra016353.1-P	Field mustard	cytosol	79.22	80.54
CDY41452	Canola	peroxisome	79.22	80.54
PGSC0003DMT400047918	Potato	cytosol	79.63	80.46
AT1G70580.1	Thale cress	cytosol, nucleus, peroxisome	79.63	80.46
Solyc05g013380.2.1	Tomato	extracellular, nucleus, plastid	79.42	80.25
CDX86159	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	21.6	80.15
CDX88411	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	21.6	80.15
CDX91589	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	21.6	80.15
AT1G23310.1	Thale cress	cytosol	79.22	80.04
CDY66294	Canola	cytosol	79.22	80.04
PGSC0003DMT400042202	Potato	cytosol, mitochondrion, peroxisome, plastid	13.99	80.0
KRH74536	Soybean	cytosol	79.01	79.83
Bra012371.1-P	Field mustard	cytosol	74.07	78.95
Solyc01g007940.2.1	Tomato	cytosol	76.75	78.86
CDY12474	Canola	peroxisome, plastid	75.1	67.97
CDY25781	Canola	cytosol	7.61	63.79
Bra009959.1-P	Field mustard	cytosol, peroxisome, plasma membrane	35.6	50.29
HORVU7Hr1G074250.1	Barley	cytosol, peroxisome	7.2	46.05
HORVU5Hr1G062990.1	Barley	cytosol	44.44	41.62
HORVU2Hr1G030820.1	Barley	mitochondrion	47.33	41.29
HORVU1Hr1G018540.17	Barley	cytosol, golgi, plastid	47.74	41.21
HORVU5Hr1G014730.8	Barley	cytosol, plastid, vacuole	17.7	27.13
HORVU7Hr1G053970.1	Barley	mitochondrion	3.91	24.36
CDX86161	Canola	cytosol	5.97	21.97
HORVU2Hr1G119710.1	Barley	mitochondrion	4.12	20.62
HORVU3Hr1G019430.6	Barley	cytosol, mitochondrion	16.87	19.07
HORVU3Hr1G098750.1	Barley	cytosol, peroxisome	2.26	18.64
HORVU2Hr1G094230.2	Barley	cytosol	15.43	15.5
HORVU4Hr1G009800.5	Barley	cytosol, plastid	17.49	14.89
HORVU7Hr1G012940.1	Barley	cytosol	17.9	14.52
HORVU3Hr1G019410.1	Barley	endoplasmic reticulum	5.35	11.26
HORVU3Hr1G016440.3	Barley	cytosol	7.0	10.9

Protein Annotations

MapMan:1.3.3.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	UniProt:A0A287I7F0	InterPro:Aminotransferase_I/II	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0030170
EnsemblPlantsGene:HORVU2Hr1G063740	EnsemblPlants:HORVU2Hr1G063740.6	InterPro:IPR015421	InterPro:IPR015422	PFAM:PF00155	PANTHER:PTHR11751
PANTHER:PTHR11751:SF373	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI000B4875C7

Description

No Description!

Coordinates

chrchr2H:-:431241165..431248002

Molecular Weight (calculated)

53525.6 Da

IEP (calculated)

6.774

GRAVY (calculated)

-0.164

Length

486 amino acids

Sequence
(BLAST)

001: GHPFPLSSAL LCGGAPGISA SGEGEMMGRK ALELYLRASE LQKEGKRIIF TNVGNPHALG QKPLTFPRQV VALCQAPFLL DDPNVGLIFP ADAIARAKHY
101: LSLAPGGLGA YSDSRGIPGV RKEVAEFIQR RDGYPSDPEL IYLTDGASKG VMQMLNAIIR NERDGILVPV PQYPLYSAAI SLFGGSLVPY YLEEEANWGL
201: DLVSTRQSVA EARSKGITVR AMVIINPGNP TGQCLSEANI RELLNFCYQE KLVLLADEVY QQNVYQDERP FISARKVMFD MGPPVSREVQ LISFHTVSKG
301: YWGECGQRGG YFEMTNIPPK TVDEIYKVAS IALSPNVPGQ IFMGLMVNPP KPGDISYLKY SAESKSILES LRRRAQIMTD GFNSCRNVVC NFTEGAMYSF
401: PQIRLPQRAM DVAKSAGKEP DVYYCLKLLE ATGISTVPGS GFGQKEGVFH LRTTILPAEE DMPAIMSSFK KFNDSFMDQY QDHSRL

Best Arabidopsis Sequence Match ( AT1G70580.4 )
(BLAST)

001: MSLKALDYES LNENVKNCQY AVRGELYLRA SELQKEGKKI IFTNVGNPHA LGQKPLTFPR QVVSLCQAPF LLDDPNVGMI FPADAIARAK HYLSLTSGGL
101: GAYSDSRGLP GVRKEVAEFI ERRDGYPSDP ELIFLTDGAS KGVMQILNCV IRGQKDGILV PVPQYPLYSA TISLLGGTLV PYYLEESENW GLDVNNLRQS
201: VAQARSQGIT VRAMVIINPG NPTGQCLSEA NIREILRFCC DERLVLLGDE VYQQNIYQDE RPFISSKKVL MDMGAPISKE VQLISFHTVS KGYWGECGQR
301: GGYFEMTNIP PRTVEEIYKV ASIALSPNVS AQIFMGLMVS PPKPGDISYD QFVRESKGIL ESLRRRARMM TDGFNSCKNV VCNFTEGAMY SFPQIKLPSK
401: AIQAAKQAGK VPDVFYCLKL LEATGISTVP GSGFGQKEGV FHLRTTILPA EEEMPEIMDS FKKFNDEFMS QYADNFGYSR M

Arabidopsis Description

GGAT2Glutamate--glyoxylate aminotransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7E9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.