Factsheet for AT1G70580.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

cytosol 2
peroxisome 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61225	Canola	peroxisome	97.09	97.09
Bra016202.1-P	Field mustard	cytosol	96.88	96.68
CDY66294	Canola	cytosol	96.05	96.05
CDX91589	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	25.57	93.89
CDX88411	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	25.57	93.89
CDX86159	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	25.57	93.89
AT1G23310.1	Thale cress	cytosol	93.14	93.14
VIT_00s0225g00130.t01	Wine grape	cytosol	87.32	87.32
KRH74536	Soybean	cytosol	86.69	86.69
KRH69622	Soybean	cytosol	86.69	86.69
PGSC0003DMT400047918	Potato	cytosol	86.07	86.07
Solyc05g013380.2.1	Tomato	extracellular, nucleus, plastid	86.07	86.07
GSMUA_Achr6P29540_001	Banana	cytosol	85.24	85.24
PGSC0003DMT400042202	Potato	cytosol, mitochondrion, peroxisome, plastid	14.97	84.71
Solyc01g007940.2.1	Tomato	cytosol	83.16	84.57
GSMUA_Achr8P15810_001	Banana	cytosol	83.78	83.78
TraesCS2A01G261600.1	Wheat	peroxisome	83.37	83.72
TraesCS2B01G280600.1	Wheat	plastid	83.37	83.72
Os07t0108300-01	Rice	extracellular, nucleus, plasma membrane	84.41	83.71
KXG34265	Sorghum	cytosol	80.87	81.38
Zm00001d007937_P001	Maize	mitochondrion	80.87	81.21
HORVU2Hr1G063740.6	Barley	peroxisome, vacuole	80.46	79.63
TraesCS2D01G262400.2	Wheat	cytosol	78.17	75.35
Bra009959.1-P	Field mustard	cytosol, peroxisome, plasma membrane	39.71	55.52
AT1G17290.1	Thale cress	mitochondrion	50.1	44.38
AT1G72330.3	Thale cress	mitochondrion	49.48	43.04
CDX86161	Canola	cytosol	6.03	21.97
AT4G26200.1	Thale cress	cytosol	18.92	20.36
AT5G65800.1	Thale cress	cytosol	19.13	19.57
AT4G11280.1	Thale cress	cytosol	19.96	19.39
AT3G49700.1	Thale cress	cytosol	18.92	19.36
AT4G37770.1	Thale cress	cytosol	18.71	19.19
AT4G08040.1	Thale cress	cytosol	17.67	18.48
AT5G51690.1	Thale cress	golgi, mitochondrion	18.71	18.18
AT3G61510.1	Thale cress	cytosol	18.3	18.03
AT1G01480.1	Thale cress	cytosol	18.3	17.74
AT2G22810.1	Thale cress	cytosol	17.46	17.72
AT1G62960.1	Thale cress	plastid	18.3	15.8

Protein Annotations

MapMan:1.3.3.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	EntrezGene:843395	UniProt:A0A178WFM8	ProteinID:AAG52344.1
ProteinID:AAG52480.1	ProteinID:AEE35082.1	ProteinID:AEE35083.1	ProteinID:AEE35084.1	ProteinID:AEE35085.1	EMBL:AF479640
EMBL:AK316788	EMBL:AK317441	Symbol:AOAT2	ArrayExpress:AT1G70580	EnsemblPlantsGene:AT1G70580	RefSeq:AT1G70580
TAIR:AT1G70580	RefSeq:AT1G70580-TAIR-G	EnsemblPlants:AT1G70580.1	TAIR:AT1G70580.1	EMBL:AY035130	EMBL:AY062982
EMBL:AY084890	InterPro:Aminotransferase_I/II	GO:GO:0003674	GO:GO:0003824	GO:GO:0004021	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0008150
GO:GO:0008152	GO:GO:0008453	GO:GO:0008483	GO:GO:0009056	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	GO:GO:0042853
GO:GO:0047958	InterPro:IPR015421	InterPro:IPR015422	RefSeq:NP_001031262.1	RefSeq:NP_001031263.1	RefSeq:NP_177215.1
RefSeq:NP_974122.1	ProteinID:OAP17056.1	PFAM:PF00155	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
PANTHER:PTHR11751	PANTHER:PTHR11751:SF373	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	UniProt:Q9S7E9
SUPFAM:SSF53383	UniParc:UPI00000AC411	:	:	:	:

Description

GGAT2Glutamate--glyoxylate aminotransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7E9]

Coordinates

chr1:+:26612359..26616071

Molecular Weight (calculated)

53447.5 Da

IEP (calculated)

6.523

GRAVY (calculated)

-0.193

Length

481 amino acids

Sequence
(BLAST)

001: MSLKALDYES LNENVKNCQY AVRGELYLRA SELQKEGKKI IFTNVGNPHA LGQKPLTFPR QVVSLCQAPF LLDDPNVGMI FPADAIARAK HYLSLTSGGL
101: GAYSDSRGLP GVRKEVAEFI ERRDGYPSDP ELIFLTDGAS KGVMQILNCV IRGQKDGILV PVPQYPLYSA TISLLGGTLV PYYLEESENW GLDVNNLRQS
201: VAQARSQGIT VRAMVIINPG NPTGQCLSEA NIREILRFCC DERLVLLGDE VYQQNIYQDE RPFISSKKVL MDMGAPISKE VQLISFHTVS KGYWGECGQR
301: GGYFEMTNIP PRTVEEIYKV ASIALSPNVS AQIFMGLMVS PPKPGDISYD QFVRESKGIL ESLRRRARMM TDGFNSCKNV VCNFTEGAMY SFPQIKLPSK
401: AIQAAKQAGK VPDVFYCLKL LEATGISTVP GSGFGQKEGV FHLRTTILPA EEEMPEIMDS FKKFNDEFMS QYADNFGYSR M

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.