Factsheet for GSMUA_Achr6P29540_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P15810_001	Banana	cytosol	93.76	93.76
VIT_00s0225g00130.t01	Wine grape	cytosol	90.23	90.23
Os07t0108300-01	Rice	extracellular, nucleus, plasma membrane	89.19	88.45
CDY25781	Canola	cytosol	10.6	87.93
TraesCS2B01G280600.1	Wheat	plastid	87.11	87.47
TraesCS2A01G261600.1	Wheat	peroxisome	87.11	87.47
PGSC0003DMT400047918	Potato	cytosol	87.11	87.11
PGSC0003DMT400042202	Potato	cytosol, mitochondrion, peroxisome, plastid	15.38	87.06
Solyc05g013380.2.1	Tomato	extracellular, nucleus, plastid	86.69	86.69
KRH69622	Soybean	cytosol	86.49	86.49
KRH74536	Soybean	cytosol	86.07	86.07
CDY61225	Canola	peroxisome	85.86	85.86
Bra016202.1-P	Field mustard	cytosol	85.65	85.48
Bra016353.1-P	Field mustard	cytosol	84.82	85.36
KXG34265	Sorghum	cytosol	84.82	85.36
AT1G70580.1	Thale cress	cytosol, nucleus, peroxisome	85.24	85.24
Bra024580.1-P	Field mustard	cytosol	84.41	84.94
CDY04729	Canola	cytosol	84.41	84.94
CDY41452	Canola	peroxisome	84.41	84.94
CDY44130	Canola	cytosol	84.41	84.94
CDY66294	Canola	cytosol	84.82	84.82
Solyc01g007940.2.1	Tomato	cytosol	83.16	84.57
Zm00001d007937_P001	Maize	mitochondrion	83.99	84.34
CDX91708	Canola	peroxisome	70.48	84.12
CDY25780	Canola	peroxisome	70.06	83.62
AT1G23310.1	Thale cress	cytosol	83.58	83.58
Bra012371.1-P	Field mustard	cytosol	79.21	83.55
HORVU2Hr1G063740.6	Barley	peroxisome, vacuole	83.37	82.51
CDX86159	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	22.25	81.68
CDX88411	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	22.25	81.68
CDX91589	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	22.25	81.68
TraesCS2D01G262400.2	Wheat	cytosol	81.29	78.36
CDY12474	Canola	peroxisome, plastid	80.25	71.88
Bra009959.1-P	Field mustard	cytosol, peroxisome, plasma membrane	35.97	50.29
GSMUA_Achr2P07320_001	Banana	cytosol	50.52	49.9
GSMUA_Achr11P...	Banana	mitochondrion	51.56	48.82
GSMUA_Achr10P...	Banana	mitochondrion	52.81	48.57
CDX86161	Canola	cytosol	6.65	24.24
GSMUA_AchrUn_...	Banana	cytosol	18.5	20.09
GSMUA_Achr4P24930_001	Banana	cytosol	19.54	19.54
GSMUA_Achr5P13730_001	Banana	golgi, mitochondrion	20.17	19.28
GSMUA_Achr4P30870_001	Banana	cytosol	16.84	19.19
GSMUA_Achr3P25830_001	Banana	mitochondrion	17.67	18.93
GSMUA_Achr10P...	Banana	cytosol	17.05	18.64
GSMUA_Achr1P14280_001	Banana	nucleus	17.67	18.6
GSMUA_Achr2P08600_001	Banana	cytosol	17.67	18.36
GSMUA_Achr1P18880_001	Banana	golgi, mitochondrion	19.13	18.15
GSMUA_Achr1P04420_001	Banana	cytosol	17.26	17.97
GSMUA_Achr4P29150_001	Banana	cytosol	18.09	17.9
GSMUA_Achr4P01340_001	Banana	mitochondrion	17.05	17.75
GSMUA_Achr5P08880_001	Banana	cytosol	17.05	17.6
GSMUA_Achr3P12300_001	Banana	mitochondrion	18.71	13.16

Protein Annotations

MapMan:1.3.3.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0030170	EnsemblPlantsGene:GSMUA_Achr6G29540_001
EnsemblPlants:GSMUA_Achr6P29540_001	EnsemblPlants:GSMUA_Achr6T29540_001	InterPro:IPR015421	InterPro:IPR015422	UniProt:M0TB99	PFAM:PF00155
PANTHER:PTHR11751	PANTHER:PTHR11751:SF373	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383
UniParc:UPI0002969841	:	:	:	:	:

Description

Alanine aminotransferase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr6G29540_001]

Coordinates

chr6:+:29755986..29762797

Molecular Weight (calculated)

53342.5 Da

IEP (calculated)

6.864

GRAVY (calculated)

-0.140

Length

481 amino acids

Sequence
(BLAST)

001: MSPKPLDYES LNENVKKVAY AVRGELYLRA SELQKEGKKI IFTNVGNPHA LGQKPLTFPR QVVALCQAPF LLDDPHVGIL FPADAIARAK HYLSLTSGGL
101: GAYSDSRGLP GIRKEVAEFI ERRDGYPSDP ELIYLTDGAS KGVMQILNTV IRNEKDGILV PVPQYPLYSA AISLFGGSLV PYYLEEEANW GLDINHLRQS
201: VAAARMKGIT VRAMVIINPG NPTGQCLSEA NLNGLLKFCF QENLVLLADE VYQQNIYQDE RPFISARKIL LDMGPPMSKE VQLVSFHTVS KGYWGECGQR
301: GGYFEMTNIP AKTVDEIYKV ASVSLSPNVP GQIFMGLMVN PLKPGDISYL RFVAESTAIL ESLKRRAHIM TDGFNSCRNV VCNFTEGAMY SFPQIRLPPR
401: AIEAAKSAGK APDVFYCLKL LEATGISTVP GSGFGQKEGV FHLRTTILPA EEDMPAIMTS FKKFNDEFME QYEDYRGYSR M

Best Arabidopsis Sequence Match ( AT1G70580.4 )
(BLAST)

001: MSLKALDYES LNENVKNCQY AVRGELYLRA SELQKEGKKI IFTNVGNPHA LGQKPLTFPR QVVSLCQAPF LLDDPNVGMI FPADAIARAK HYLSLTSGGL
101: GAYSDSRGLP GVRKEVAEFI ERRDGYPSDP ELIFLTDGAS KGVMQILNCV IRGQKDGILV PVPQYPLYSA TISLLGGTLV PYYLEESENW GLDVNNLRQS
201: VAQARSQGIT VRAMVIINPG NPTGQCLSEA NIREILRFCC DERLVLLGDE VYQQNIYQDE RPFISSKKVL MDMGAPISKE VQLISFHTVS KGYWGECGQR
301: GGYFEMTNIP PRTVEEIYKV ASIALSPNVS AQIFMGLMVS PPKPGDISYD QFVRESKGIL ESLRRRARMM TDGFNSCKNV VCNFTEGAMY SFPQIKLPSK
401: AIQAAKQAGK VPDVFYCLKL LEATGISTVP GSGFGQKEGV FHLRTTILPA EEEMPEIMDS FKKFNDEFMS QYADNFGYSR M

Arabidopsis Description

GGAT2Glutamate--glyoxylate aminotransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7E9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.