Factsheet for GSMUA_Achr4P24930_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P04420_001
GSMUA_Achr1P14280_001
GSMUA_Achr2P08600_001
GSMUA_Achr3P25830_001
GSMUA_Achr4P01340_001
GSMUA_Achr4P24930_001
GSMUA_Achr4P29150_001
GSMUA_Achr5P08880_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G61510.1	GSMUA_Achr4P24930_001	AT3G61510.1	14983000
AT3G61510.1	GSMUA_Achr4P29150_001	AT3G61510.1	14983000
AT3G61510.1	GSMUA_AchrUn_...	AT3G61510.1	14983000
AT3G61510.1	GSMUA_Achr4P24930_001	AT4G11280.1	14983000
AT3G61510.1	GSMUA_Achr4P29150_001	AT4G11280.1	14983000
AT3G61510.1	GSMUA_AchrUn_...	AT4G11280.1	14983000
AT4G11280.1	GSMUA_Achr1P04420_001	AT2G22810.1	14983000
AT4G11280.1	GSMUA_Achr1P14280_001	AT2G22810.1	14983000
AT4G11280.1	GSMUA_Achr2P08600_001	AT2G22810.1	14983000
AT4G11280.1	GSMUA_Achr3P25830_001	AT2G22810.1	14983000
AT4G11280.1	GSMUA_Achr4P01340_001	AT2G22810.1	14983000
AT4G11280.1	GSMUA_Achr5P08880_001	AT2G22810.1	14983000
AT4G11280.1	GSMUA_Achr4P24930_001	AT3G61510.1	14983000
AT4G11280.1	GSMUA_Achr4P29150_001	AT3G61510.1	14983000
AT4G11280.1	GSMUA_AchrUn_...	AT3G61510.1	14983000
AT4G11280.1	GSMUA_Achr4P24930_001	AT4G11280.1	14983000
AT4G11280.1	GSMUA_Achr4P29150_001	AT4G11280.1	14983000
AT4G11280.1	GSMUA_AchrUn_...	AT4G11280.1	14983000

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P29150_001	Banana	cytosol	78.17	77.37
GSMUA_AchrUn_...	Banana	cytosol	70.27	76.3
KRH41241	Soybean	cytosol	65.49	65.08
KRH59970	Soybean	cytosol	64.86	64.46
KRH65284	Soybean	cytosol	16.42	64.23
KRH27892	Soybean	cytosol	64.03	64.17
Solyc01g095080.2.1	Tomato	cytosol	64.03	63.51
PGSC0003DMT400000553	Potato	cytosol	64.03	63.37
KRH00855	Soybean	cytosol	63.2	63.33
VIT_15s0046g02220.t01	Wine grape	cytosol	57.59	63.24
TraesCS2A01G396400.1	Wheat	cytosol	63.41	62.76
PGSC0003DMT400032096	Potato	cytosol	62.99	62.6
TraesCS2B01G414800.1	Wheat	cytosol	63.2	62.55
KRH40379	Soybean	cytosol	62.99	62.47
KRH48058	Soybean	cytosol	61.54	62.45
KRH06585	Soybean	cytosol	61.54	62.45
TraesCS2D01G394200.1	Wheat	cytosol	62.99	62.35
VIT_02s0025g00360.t01	Wine grape	cytosol	62.16	62.16
CDY11360	Canola	cytosol	60.71	61.73
Bra007611.1-P	Field mustard	cytosol	60.71	61.73
Os04t0578000-01	Rice	cytosol	61.95	61.7
Solyc08g081540.2.1	Tomato	cytosol	61.75	61.49
PGSC0003DMT400031769	Potato	cytosol	61.95	61.44
PGSC0003DMT400014932	Potato	cytosol	61.75	61.11
AT3G61510.1	Thale cress	cytosol	61.95	61.07
Solyc08g081550.2.1	Tomato	cytosol	59.88	61.02
Zm00001d002592_P002	Maize	cytosol	61.33	60.82
CDY13251	Canola	cytosol	61.95	60.69
Bra035236.1-P	Field mustard	cytosol	61.54	60.66
CDX86796	Canola	cytosol	61.54	60.66
AT4G11280.1	Thale cress	cytosol	62.37	60.61
EES12700	Sorghum	cytosol	61.75	60.49
CDY65356	Canola	cytosol	59.25	60.25
PGSC0003DMT400084228	Potato	cytosol	21.62	59.43
AT1G01480.1	Thale cress	cytosol	60.91	59.07
Solyc12g056180.1.1	Tomato	cytosol	57.8	58.77
PGSC0003DMT400012864	Potato	cytosol	59.25	58.76
CDY15174	Canola	cytosol	60.5	58.67
Bra033261.1-P	Field mustard	cytosol	60.71	58.52
Solyc05g050010.2.1	Tomato	cytosol	57.59	58.19
CDX90035	Canola	cytosol	53.43	57.49
Zm00001d026060_P003	Maize	cytosol	60.5	57.06
Solyc08g008100.2.1	Tomato	nucleus	40.75	53.7
GSMUA_Achr4P30870_001	Banana	cytosol	46.99	53.55
GSMUA_Achr10P...	Banana	cytosol	48.65	53.18
GSMUA_Achr3P25830_001	Banana	mitochondrion	49.48	53.01
GSMUA_Achr1P14280_001	Banana	nucleus	49.48	52.08
GSMUA_Achr2P08600_001	Banana	cytosol	49.27	51.19
GSMUA_Achr1P04420_001	Banana	cytosol	48.65	50.65
GSMUA_Achr4P01340_001	Banana	mitochondrion	48.65	50.65
PGSC0003DMT400055753	Potato	vacuole	39.92	50.53
GSMUA_Achr5P08880_001	Banana	cytosol	48.44	50.0
HORVU2Hr1G094230.2	Barley	cytosol	49.69	49.38
GSMUA_Achr1P18880_001	Banana	golgi, mitochondrion	38.46	36.49
GSMUA_Achr5P13730_001	Banana	golgi, mitochondrion	36.8	35.19
GSMUA_Achr3P12300_001	Banana	mitochondrion	38.46	27.05
GSMUA_Achr8P15810_001	Banana	cytosol	20.17	20.17
GSMUA_Achr6P29540_001	Banana	cytosol	19.54	19.54
GSMUA_Achr11P...	Banana	mitochondrion	18.3	17.32
GSMUA_Achr2P07320_001	Banana	cytosol	17.46	17.25
GSMUA_Achr10P...	Banana	mitochondrion	18.5	17.02

Protein Annotations

MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0030170	EnsemblPlantsGene:GSMUA_Achr4G24930_001
EnsemblPlants:GSMUA_Achr4P24930_001	EnsemblPlants:GSMUA_Achr4T24930_001	InterPro:IPR015421	InterPro:IPR015422	UniProt:M0SRV4	InterPro:NHTrfase_class1_PyrdxlP-BS
PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF25	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI000294D064	SEG:seg	:

Description

1-aminocyclopropane-1-carboxylate synthase [Source:GMGC_GENE;Acc:GSMUA_Achr4G24930_001]

Coordinates

chr4:-:24594460..24596343

Molecular Weight (calculated)

53974.6 Da

IEP (calculated)

7.061

GRAVY (calculated)

-0.279

Length

481 amino acids

Sequence
(BLAST)

001: MGIPGDEILS RVATGDGHGE NTSYFDGWKA YDNDPFHPIH NPNGVIQMGL AENQLCLDLM RDWIRKNPQA SICTKEGVSE FEAIANFQDY HGLPDFRKAI
101: AKFMEKARGG RARFDPERIV MSGGATGAQE TIAFCLANPG DAFLIPTPYY PAFDRDFRWR TGVQLLPIRC HSHDNFKITE AELAAAYRKA RDSKIRVKGI
201: LITNPSNPLG TTMDRETLRT LVRFANEERI HLVCDEIFSG TVFDGPEYVS VAEILQEDPS TCDGDLIHIV YSLSKDLGVP GFRVGIIYSF NDAVVSCARR
301: MSSFGLVSTQ TQRLLASMLG DDDFTTDLLA ESRRRLMHRH RTFTAGLEGV GIRCLQSNAG LFCWMSLKPL LKDATAEGEV ELWRVIVNEV KLNISPGSSF
401: HCTEPGWFRA CFANMDEETM ETALRRIRTF VRRANDAATA AKTKKRWDTS LRLSLPRRFE EMTVLTPRLM SPRSPLVQAA T

Best Arabidopsis Sequence Match ( AT1G01480.1 )
(BLAST)

001: MGLPGKNKGA VLSKIATNNQ HGENSEYFDG WKAYDKDPFH LSRNPHGIIQ MGLAENQLCL DLIKDWVKEN PEASICTLEG IHQFSDIANF QDYHGLKKFR
101: QAIAHFMGKA RGGRVTFDPE RVVMSGGATG ANETIMFCLA DPGDVFLIPS PYYAAFDRDL RWRTGVEIIP VPCSSSDNFK LTVDAAEWAY KKAQESNKKV
201: KGLILTNPSN PLGTMLDKDT LTNLVRFVTR KNIHLVVDEI YAATVFAGGD FVSVAEVVND VDISEVNVDL IHIVYSLSKD MGLPGFRVGI VYSFNDSVVS
301: CARKMSSFGL VSSQTQLMLA SMLSDDQFVD NFLMESSRRL GIRHKVFTTG IKKADIACLT SNAGLFAWMD LRHLLRDRNS FESEIELWHI IIDRVKLNVS
401: PGSSFRCTEP GWFRICFANM DDDTLHVALG RIQDFVSKNK NKIVEKASEN DQVIQNKSAK KLKWTQTNLR LSFRRLYEDG LSSPGIMSPH SPLLRA

Arabidopsis Description

ACS21-aminocyclopropane-1-carboxylate synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q06402]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.