Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d002592_P002 | |
| Zm00001d026060_P003 | |
| Zm00001d033862_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES12700 | Sorghum | cytosol | 92.78 | 91.65 |
| Zm00001d026060_P003 | Maize | cytosol | 94.64 | 90.0 |
| TraesCS2A01G396400.1 | Wheat | cytosol | 82.06 | 81.89 |
| TraesCS2B01G414800.1 | Wheat | cytosol | 82.06 | 81.89 |
| TraesCS2D01G394200.1 | Wheat | cytosol | 82.06 | 81.89 |
| Os04t0578000-01 | Rice | cytosol | 80.21 | 80.54 |
| HORVU2Hr1G094230.2 | Barley | cytosol | 62.89 | 63.02 |
| GSMUA_Achr4P29150_001 | Banana | cytosol | 62.68 | 62.55 |
| KRH00855 | Soybean | cytosol | 61.44 | 62.08 |
| KRH41241 | Soybean | cytosol | 61.65 | 61.78 |
| VIT_02s0025g00360.t01 | Wine grape | cytosol | 61.24 | 61.75 |
| KRH27892 | Soybean | cytosol | 61.03 | 61.67 |
| GSMUA_AchrUn_... | Banana | cytosol | 56.29 | 61.63 |
| GSMUA_Achr4P24930_001 | Banana | cytosol | 60.82 | 61.33 |
| KRH59970 | Soybean | cytosol | 60.62 | 60.74 |
| KRH40379 | Soybean | cytosol | 60.62 | 60.62 |
| CDX86796 | Canola | cytosol | 60.62 | 60.25 |
| Bra035236.1-P | Field mustard | cytosol | 60.62 | 60.25 |
| AT4G11280.1 | Thale cress | cytosol | 61.44 | 60.2 |
| KRH48058 | Soybean | cytosol | 58.76 | 60.13 |
| KRH06585 | Soybean | cytosol | 58.56 | 59.92 |
| CDY13251 | Canola | cytosol | 60.62 | 59.88 |
| PGSC0003DMT400000553 | Potato | cytosol | 59.79 | 59.67 |
| PGSC0003DMT400032096 | Potato | cytosol | 59.38 | 59.5 |
| Solyc05g050010.2.1 | Tomato | cytosol | 58.35 | 59.45 |
| PGSC0003DMT400031769 | Potato | cytosol | 59.18 | 59.18 |
| VIT_15s0046g02220.t01 | Wine grape | cytosol | 53.4 | 59.13 |
| Solyc01g095080.2.1 | Tomato | cytosol | 58.97 | 58.97 |
| PGSC0003DMT400014932 | Potato | cytosol | 58.76 | 58.64 |
| Solyc08g081540.2.1 | Tomato | cytosol | 58.35 | 58.59 |
| Solyc08g081550.2.1 | Tomato | cytosol | 56.7 | 58.26 |
| KRH65284 | Soybean | cytosol | 14.64 | 57.72 |
| Bra007611.1-P | Field mustard | cytosol | 56.29 | 57.72 |
| CDY11360 | Canola | cytosol | 56.29 | 57.72 |
| AT3G61510.1 | Thale cress | cytosol | 57.53 | 57.17 |
| CDY65356 | Canola | cytosol | 55.67 | 57.08 |
| CDY15174 | Canola | cytosol | 58.14 | 56.85 |
| AT1G01480.1 | Thale cress | cytosol | 57.73 | 56.45 |
| Bra033261.1-P | Field mustard | cytosol | 57.94 | 56.31 |
| CDX90035 | Canola | cytosol | 51.34 | 55.7 |
| Solyc12g056180.1.1 | Tomato | cytosol | 53.61 | 54.97 |
| PGSC0003DMT400084228 | Potato | cytosol | 19.79 | 54.86 |
| PGSC0003DMT400012864 | Potato | cytosol | 54.23 | 54.23 |
| Zm00001d039487_P001 | Maize | mitochondrion | 50.52 | 53.03 |
| Solyc08g008100.2.1 | Tomato | nucleus | 38.56 | 51.23 |
| PGSC0003DMT400055753 | Potato | vacuole | 38.14 | 48.68 |
| Zm00001d033862_P001 | Maize | cytosol | 48.45 | 48.45 |
| Zm00001d045479_P001 | Maize | cytosol, peroxisome, plastid | 36.91 | 32.43 |
| Zm00001d003953_P001 | Maize | cytosol | 4.74 | 25.84 |
| Zm00001d044135_P001 | Maize | cytosol | 2.89 | 25.0 |
| Zm00001d007937_P001 | Maize | mitochondrion | 18.35 | 18.58 |
| Zm00001d030557_P001 | Maize | cytosol, extracellular | 17.32 | 17.43 |
| Zm00001d020590_P009 | Maize | cytosol | 17.73 | 17.37 |
| Zm00001d022152_P001 | Maize | mitochondrion | 17.53 | 15.71 |
| Zm00001d006875_P001 | Maize | plastid | 17.32 | 15.03 |
| Zm00001d032984_P001 | Maize | mitochondrion | 9.48 | 14.07 |
| Zm00001d008277_P001 | Maize | cytosol | 10.31 | 11.74 |
| Zm00001d014258_P002 | Maize | cytosol | 17.94 | 9.84 |
Protein Annotations
| EntrezGene:103646045 | MapMan:11.5.1.1 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | ProteinID:AAR25558.1 | InterPro:Aminotransferase_I/II |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0030170 | InterPro:IPR015421 | InterPro:IPR015422 | InterPro:NHTrfase_class1_PyrdxlP-BS | ProteinID:ONM14719.1 | ProteinID:ONM14720.1 |
| PFAM:PF00155 | PRINTS:PR00753 | ScanProsite:PS00105 | PANTHER:PTHR43795 | PANTHER:PTHR43795:SF25 | InterPro:PyrdxlP-dep_Trfase |
| InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | UniProt:Q6JN59 | SUPFAM:SSF53383 | UniParc:UPI0000378579 | EnsemblPlantsGene:Zm00001d002592 |
| EnsemblPlants:Zm00001d002592_P002 | EnsemblPlants:Zm00001d002592_T002 | : | : | : | : |
Description
1-aminocyclopropane-1-carboxylate synthase2 1-aminocyclopropane-1-carboxylate synthase2
Coordinates
chr2:+:16311191..16314804
Molecular Weight (calculated)
53865.4 Da
IEP (calculated)
7.410
GRAVY (calculated)
-0.210
Length
485 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGSSAEQL LSRIASGDGH GENSSYFDGW KAYDMDPFDL RHNRDGVIQM GLAENQLSLD LIEQWSMEHP EASICTAQGA SQFRRIANFQ DYHGLPEFRE
101: AMAKFMGQVR AGKVTFDPDR VVMCGGATGA QDTLAFCLAD PGDAYLVPTP YYPAFDRDCC WRSGVKLLPI ECHSSNNFTL TREALVSAYD GARRQGVRVK
201: GVLITNPSNP LGTTMDRATL AMLARFATEH RVHLICDEIY AGSVFAKPDF VSIAEVIERD VPGCNRDLIH IAYSLSKDFG LPGFRVGIVY SYNDDVVACA
301: RKMSSFGLVS SQTQHFLAKM LSDAEFMARF LAESARRLAA RHDRFVAGLR EVGIACLPGN AGLFSWMDLR GMLRDKTHDA ELELWRVIVH KVKLNVSPGT
401: SFHCNEPGWF RVCHANMDDE TMEVALDRIR RFVRQHQHKA KAERWAATRP MRLSLPRRGG ATASHLPISS PMALLSPQSP MVHAS
101: AMAKFMGQVR AGKVTFDPDR VVMCGGATGA QDTLAFCLAD PGDAYLVPTP YYPAFDRDCC WRSGVKLLPI ECHSSNNFTL TREALVSAYD GARRQGVRVK
201: GVLITNPSNP LGTTMDRATL AMLARFATEH RVHLICDEIY AGSVFAKPDF VSIAEVIERD VPGCNRDLIH IAYSLSKDFG LPGFRVGIVY SYNDDVVACA
301: RKMSSFGLVS SQTQHFLAKM LSDAEFMARF LAESARRLAA RHDRFVAGLR EVGIACLPGN AGLFSWMDLR GMLRDKTHDA ELELWRVIVH KVKLNVSPGT
401: SFHCNEPGWF RVCHANMDDE TMEVALDRIR RFVRQHQHKA KAERWAATRP MRLSLPRRGG ATASHLPISS PMALLSPQSP MVHAS
001: MVAFATEKKQ DLNLLSKIAS GDGHGENSSY FDGWKAYEEN PFHPIDRPDG VIQMGLAENQ LCGDLMRKWV LKHPEASICT SEGVNQFSDI AIFQDYHGLP
101: EFRQAVAKFM EKTRNNKVKF DPDRIVMSGG ATGAHETVAF CLANPGDGFL VPTPYYPGFD RDLRWRTGVN LVPVTCHSSN GFKITVEALE AAYENARKSN
201: IPVKGLLVTN PSNPLGTTLD RECLKSLVNF TNDKGIHLIA DEIYAATTFG QSEFISVAEV IEEIEDCNRD LIHIVYSLSK DMGLPGLRVG IVYSYNDRVV
301: QIARKMSSFG LVSSQTQHLI AKMLSDEEFV DEFIRESKLR LAARHAEITT GLDGLGIGWL KAKAGLFLWM DLRNLLKTAT FDSETELWRV IVHQVKLNVS
401: PGGSFHCHEP GWFRVCFANM DHKTMETALE RIRVFTSQLE EETKPMAATT MMAKKKKKCW QSNLRLSFSD TRRFDDGFFS PHSPVPPSPL VRAQT
101: EFRQAVAKFM EKTRNNKVKF DPDRIVMSGG ATGAHETVAF CLANPGDGFL VPTPYYPGFD RDLRWRTGVN LVPVTCHSSN GFKITVEALE AAYENARKSN
201: IPVKGLLVTN PSNPLGTTLD RECLKSLVNF TNDKGIHLIA DEIYAATTFG QSEFISVAEV IEEIEDCNRD LIHIVYSLSK DMGLPGLRVG IVYSYNDRVV
301: QIARKMSSFG LVSSQTQHLI AKMLSDEEFV DEFIRESKLR LAARHAEITT GLDGLGIGWL KAKAGLFLWM DLRNLLKTAT FDSETELWRV IVHQVKLNVS
401: PGGSFHCHEP GWFRVCFANM DHKTMETALE RIRVFTSQLE EETKPMAATT MMAKKKKKCW QSNLRLSFSD TRRFDDGFFS PHSPVPPSPL VRAQT
Arabidopsis Description
ACS61-aminocyclopropane-1-carboxylate synthase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAR0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.