Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d038652_P003 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G17290.1 | Zm00001d038652_P003 | AT5G42980.1 | 15352244 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003953_P001 | Maize | cytosol | 94.64 | 59.55 |
| CDY50645 | Canola | cytosol | 57.14 | 14.81 |
| Os07t0617800-01 | Rice | mitochondrion | 83.93 | 14.29 |
| CDX68272 | Canola | nucleus | 23.21 | 11.71 |
| Zm00001d008277_P001 | Maize | cytosol | 82.14 | 10.8 |
| Zm00001d006875_P001 | Maize | plastid | 89.29 | 8.94 |
| Zm00001d030557_P001 | Maize | cytosol, extracellular | 75.0 | 8.71 |
| Zm00001d022152_P001 | Maize | mitochondrion | 82.14 | 8.5 |
| TraesCS2A01G167500.1 | Wheat | mitochondrion | 82.14 | 8.27 |
| TraesCS2D01G175200.1 | Wheat | golgi | 82.14 | 8.26 |
| HORVU2Hr1G030820.1 | Barley | mitochondrion | 82.14 | 8.26 |
| TraesCS2B01G193600.1 | Wheat | mitochondrion | 82.14 | 8.2 |
| PGSC0003DMT400012549 | Potato | cytosol, mitochondrion | 69.64 | 8.01 |
| AT1G72330.3 | Thale cress | mitochondrion | 78.57 | 7.96 |
| KRH06285 | Soybean | mitochondrion | 75.0 | 7.84 |
| VIT_09s0002g00340.t01 | Wine grape | mitochondrion | 73.21 | 7.79 |
| KRH47719 | Soybean | endoplasmic reticulum | 75.0 | 7.76 |
| CDX83914 | Canola | mitochondrion | 73.21 | 7.58 |
| CDX96776 | Canola | mitochondrion | 73.21 | 7.56 |
| Bra016607.1-P | Field mustard | mitochondrion | 73.21 | 7.56 |
| AT1G17290.1 | Thale cress | mitochondrion | 73.21 | 7.55 |
| CDY26256 | Canola | mitochondrion | 71.43 | 7.45 |
| Bra025984.1-P | Field mustard | cytosol, mitochondrion | 71.43 | 7.45 |
| CDY48485 | Canola | plastid | 71.43 | 7.41 |
| CDY21752 | Canola | mitochondrion | 71.43 | 7.31 |
| Bra026675.1-P | Field mustard | mitochondrion | 71.43 | 7.3 |
| CDX81815 | Canola | mitochondrion | 71.43 | 7.29 |
| Zm00001d020590_P009 | Maize | cytosol | 64.29 | 7.27 |
| Solyc03g123600.2.1 | Tomato | cytosol | 62.5 | 7.23 |
| Solyc06g063090.2.1 | Tomato | extracellular | 69.64 | 7.2 |
| Solyc03g123610.2.1 | Tomato | plastid | 71.43 | 6.6 |
| Zm00001d007937_P001 | Maize | mitochondrion | 53.57 | 6.26 |
| Zm00001d014258_P002 | Maize | cytosol | 71.43 | 4.52 |
| Zm00001d039487_P001 | Maize | mitochondrion | 35.71 | 4.33 |
| Zm00001d032984_P001 | Maize | mitochondrion | 17.86 | 3.06 |
| Zm00001d026060_P003 | Maize | cytosol | 26.79 | 2.94 |
| Zm00001d002592_P002 | Maize | cytosol | 25.0 | 2.89 |
| Zm00001d033862_P001 | Maize | cytosol | 25.0 | 2.89 |
| Zm00001d045479_P001 | Maize | cytosol, peroxisome, plastid | 25.0 | 2.54 |
| CDX68271 | Canola | mitochondrion | 5.36 | 2.34 |
| CDX83913 | Canola | cytosol, nucleus, peroxisome | 1.79 | 0.78 |
Protein Annotations
| Gene3D:3.40.640.10 | MapMan:35.1 | UniProt:A0A1D6NI26 | InterPro:Aminotransferase_I/II | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008483 | GO:GO:0009058 |
| GO:GO:0016740 | GO:GO:0030170 | InterPro:IPR015421 | ProteinID:ONM40025.1 | PFAM:PF00155 | PANTHER:PTHR11751 |
| PANTHER:PTHR11751:SF466 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_major | SUPFAM:SSF53383 | UniParc:UPI000844C16B | EnsemblPlantsGene:Zm00001d044135 |
| EnsemblPlants:Zm00001d044135_P001 | EnsemblPlants:Zm00001d044135_T001 | : | : | : | : |
Description
Alanine aminotransferase 2 mitochondrial
Coordinates
chr3:-:220066585..220067204
Molecular Weight (calculated)
6277.6 Da
IEP (calculated)
4.313
GRAVY (calculated)
0.196
Length
56 amino acids
Sequence
(BLAST)
(BLAST)
1: MVVPYFLDEE TGWALEVDEL KKQLEEARSK GISVRALVVI NPGNPTGQVI IYLFVT
001: MRRFLINQAK GLVDHSRRQH HHKSPSFLSP QPRPLASSPP ALSRFFSSTS EMSASDSTSS LPVTLDSINP KVLKCEYAVR GEIVNIAQKL QEDLKTNKDA
101: YPFDEIIYCN IGNPQSLGQL PIKFFREVLA LCDHASLLDE SETHGLFSTD SIDRAWRILD HIPGRATGAY SHSQGIKGLR DVIAAGIEAR DGFPADPNDI
201: FLTDGASPAV HMMMQLLLSS EKDGILSPIP QYPLYSASIA LHGGSLVPYY LDEATGWGLE ISDLKKQLEE ARSKGISVRA LVVINPGNPT GQVLAEENQR
301: DIVNFCKQEG LVLLADEVYQ ENVYVPDKKF HSFKKVARSL GYGEKDISLV SFQSVSKGYY GECGKRGGYM EVTGFTSDVR EQIYKMASVN LCSNISGQIL
401: ASLVMSPPKK EMEFSHPWLN VQRLWKTLST V
101: YPFDEIIYCN IGNPQSLGQL PIKFFREVLA LCDHASLLDE SETHGLFSTD SIDRAWRILD HIPGRATGAY SHSQGIKGLR DVIAAGIEAR DGFPADPNDI
201: FLTDGASPAV HMMMQLLLSS EKDGILSPIP QYPLYSASIA LHGGSLVPYY LDEATGWGLE ISDLKKQLEE ARSKGISVRA LVVINPGNPT GQVLAEENQR
301: DIVNFCKQEG LVLLADEVYQ ENVYVPDKKF HSFKKVARSL GYGEKDISLV SFQSVSKGYY GECGKRGGYM EVTGFTSDVR EQIYKMASVN LCSNISGQIL
401: ASLVMSPPKK EMEFSHPWLN VQRLWKTLST V
Arabidopsis Description
ALAAT2alanine aminotransferase 2 [Source:TAIR;Acc:AT1G72330]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.