CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY32970
CDY43592

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17290.1	CDY32970	AT5G42980.1	15352244
AT1G17290.1	CDY43592	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016607.1-P	Field mustard	mitochondrion	99.08	99.08
CDX83914	Canola	mitochondrion	97.79	97.97
CDX81815	Canola	mitochondrion	94.1	92.9
CDY21752	Canola	mitochondrion	93.73	92.87
CDY26256	Canola	mitochondrion	90.59	91.43
CDY48485	Canola	plastid	90.41	90.74
AT1G17290.1	Thale cress	mitochondrion	89.11	88.95
PGSC0003DMT400012549	Potato	cytosol, mitochondrion	73.99	82.34
Os07t0617800-01	Rice	mitochondrion	49.08	80.85
Zm00001d003953_P001	Maize	cytosol	13.1	79.78
VIT_09s0002g00340.t01	Wine grape	mitochondrion	76.01	78.33
GSMUA_Achr2P07320_001	Banana	cytosol	70.11	78.03
Solyc03g123600.2.1	Tomato	cytosol	69.56	77.89
TraesCS1D01G086700.1	Wheat	cytosol	57.38	77.36
Solyc06g063090.2.1	Tomato	extracellular	76.94	76.94
Zm00001d030557_P001	Maize	cytosol, extracellular	68.27	76.76
TraesCS1B01G102700.1	Wheat	golgi, plastid	67.71	76.14
TraesCS1A01G085600.1	Wheat	cytosol, golgi	67.71	76.14
GSMUA_Achr11P...	Banana	mitochondrion	71.03	75.79
Os10t0390500-01	Rice	cytosol, plasma membrane, plastid	67.53	75.78
GSMUA_Achr10P...	Banana	mitochondrion	72.69	75.33
KRH06285	Soybean	mitochondrion	74.35	75.19
KXG38638	Sorghum	cytosol	68.08	74.7
KRH47719	Soybean	endoplasmic reticulum	74.17	74.31
Zm00001d044135_P001	Maize	cytosol	7.56	73.21
EER99708	Sorghum	mitochondrion	72.14	72.27
Zm00001d022152_P001	Maize	mitochondrion	71.4	71.53
CDX68271	Canola	mitochondrion	16.24	68.75
Os03t0183600-00	Rice	extracellular	61.44	68.52
TraesCS2D01G175200.1	Wheat	golgi	69.74	67.86
HORVU2Hr1G030820.1	Barley	mitochondrion	69.56	67.68
TraesCS2A01G167500.1	Wheat	mitochondrion	69.37	67.63
TraesCS2B01G193600.1	Wheat	mitochondrion	69.93	67.56
Zm00001d006875_P001	Maize	plastid	68.82	66.73
HORVU1Hr1G018540.17	Barley	cytosol, golgi, plastid	66.79	64.3
Solyc03g123610.2.1	Tomato	plastid	71.4	63.86
CDX83913	Canola	cytosol, nucleus, peroxisome	14.76	62.5
CDY50645	Canola	cytosol	21.96	55.09
CDX91708	Canola	peroxisome	38.75	52.11
CDY25781	Canola	cytosol	5.54	51.72
Zm00001d032984_P001	Maize	mitochondrion	31.18	51.68
CDY25780	Canola	peroxisome	38.38	51.61
CDY04729	Canola	cytosol	45.39	51.46
CDY44130	Canola	cytosol	45.39	51.46
CDY41452	Canola	peroxisome	45.2	51.26
CDY61225	Canola	peroxisome	44.83	50.52
CDY66294	Canola	cytosol	44.65	50.31
CDX88411	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	11.81	48.85
CDX91589	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	11.81	48.85
CDX86159	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	11.81	48.85
CDY12474	Canola	peroxisome, plastid	44.28	44.69
Zm00001d014258_P002	Maize	cytosol	67.16	41.18
CDY03822	Canola	cytosol	9.78	41.09
CDX68272	Canola	nucleus	7.93	38.74
Zm00001d008277_P001	Maize	cytosol	27.86	35.45
CDX92755	Canola	cytosol	18.27	23.8
CDY42751	Canola	cytosol	19.37	23.28
CDX89355	Canola	cytosol	18.82	22.77
CDY71142	Canola	cytosol	18.63	22.54
CDX94359	Canola	cytosol	18.63	22.54
CDY05953	Canola	cytosol	18.08	20.85
CDY02111	Canola	cytosol	18.08	20.85
CDY23035	Canola	cytosol	17.9	20.82
CDY08163	Canola	cytosol	17.9	20.64
CDY66472	Canola	cytosol	15.31	20.6
CDX75675	Canola	cytosol	16.97	20.4
CDY72652	Canola	cytosol	7.56	20.4
CDX91604	Canola	mitochondrion, plastid	18.63	20.2
CDY46931	Canola	mitochondrion, plastid	18.63	20.2
CDX69326	Canola	cytosol	17.16	19.83
CDY69462	Canola	cytosol	17.16	19.83
CDX89520	Canola	cytosol	16.97	19.41
CDY18674	Canola	cytosol	15.68	19.36
CDX81296	Canola	cytosol	15.68	19.36
CDY11360	Canola	cytosol	16.79	19.24
CDY65356	Canola	cytosol	16.79	19.24
CDY13251	Canola	cytosol	17.34	19.14
CDX86796	Canola	cytosol	17.16	19.06
CDY25639	Canola	cytosol	16.61	18.99
CDX86161	Canola	cytosol	4.61	18.94
CDY45965	Canola	cytosol	18.82	18.78
CDY45474	Canola	cytosol	18.08	18.74
CDY15174	Canola	cytosol	16.97	18.55
CDY34015	Canola	cytosol	15.68	18.32
CDX90035	Canola	cytosol	14.94	18.12
CDX83146	Canola	cytosol	15.5	18.1
CDY43579	Canola	cytosol, mitochondrion, plastid	5.17	14.58
Os10t0390701-00	Rice	cytosol	1.48	7.41

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:4.1.3.1.1	GO:A0A078E6B5	InterPro:Aminotransferase_I/II	EnsemblPlants:CDX96776
ProteinID:CDX96776	ProteinID:CDX96776.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0030170	EnsemblPlantsGene:GSBRNA2T00103004001	InterPro:IPR015421
InterPro:IPR015422	PFAM:PF00155	PANTHER:PTHR11751	PANTHER:PTHR11751:SF466	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI0004EE52F2	SEG:seg	:	:

Description

BnaA08g23190D

Coordinates

chrLK031895:-:937048..940377

Molecular Weight (calculated)

59188.9 Da

IEP (calculated)

6.666

GRAVY (calculated)

-0.159

Length

542 amino acids

Sequence
(BLAST)

001: MRRFVIGQAK NLIDQTHQAR HKSLRLLSLL AASDSAPVLS SPRLFSSSSD MSGSGSDSSS SSLPVTLDSL NPKVLKCEYA VRGEIVNIAQ KLQEDLKINK
101: DAYPFDEIIY CNIGNPQSLG QQPITFFREV LALCSHTALL DESATHGLFS SDSIERAWKI LDQIPGKATG AYSHSQGIKG LRDAIAAGIE ARDGFPADPN
201: DIFMTDGASP GVHMMMQLLI SSEKDGIICP IPQYPLYSAS IALHGGSLVP YYLDEASGWG LEISELKKQL QDARSKGITV RALVVINPGN PTGQVLAEEN
301: QREIVDFCKK EGLVLLADEV YQENVYVPDK KFHSFKKVAR SMGYGEKDVC LVSFQSISKG YYGECGKRGG YMEITGFTSD VRAQIYKLAS VNLCSNISGQ
401: ILASLVMSPP KPGDDSYDSY IAEKEGILSS LAKRAKTLEE ALNKLEGVTC NRAEGAMYLF PCINLPQKAI AAAEAAKTAP DAFYCKRLLN ATGIVVVPGS
501: GFRQVPGTWH FRCTILPQED KIPAIVNRLT EFHKSFMDEF RN

Best Arabidopsis Sequence Match ( AT1G17290.1 )
(BLAST)

001: MRRFVIGQAK NLIDQSRRRQ LHHHKNLSFV SLIPPFSAPS DSSSRHLSSS SSSDMSASDS SSSLPVTLDT INPKVIKCEY AVRGEIVNIA QKLQEDLKTN
101: KDAYPFDEII YCNIGNPQSL GQQPITFFRE VLALCSYTAL LDESATHGLF SSDSIERAWK ILDQIPGRAT GAYSHSQGIK GLRDAIADGI EARDGFPADP
201: NDIFMTDGAS PGVHMMMQLL ITSEKDGILC PIPQYPLYSA SIALHGGTLV PYYLDEASGW GLEISELKKQ LEDARSKGIT VRALAVINPG NPTGQVLSEE
301: NQRDVVKFCK QEGLVLLADE VYQENVYVPD KKFHSFKKVA RSMGYGEKDL ALVSFQSVSK GYYGECGKRG GYMEVTGFTS DVREQIYKMA SVNLCSNISG
401: QILASLIMSP PKPGDDSYES YIAEKDGILS SLARRAKTLE EALNKLEGVT CNRAEGAMYL FPCLHLPQKA IAAAEAEKTA PDNFYCKRLL KATGIVVVPG
501: SGFRQVPGTW HFRCTILPQE DKIPAIVDRL TAFHQSFMDE FRD

Arabidopsis Description

ALAAT1Alanine aminotransferase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4I7I0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.