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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane, plastid
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
plasma membrane: 27800704
plastid: 27992503
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d030557_P001 Maize cytosol, extracellular 91.93 92.12
TraesCS1A01G085600.1 Wheat cytosol, golgi 90.48 90.66
TraesCS1B01G102700.1 Wheat golgi, plastid 90.27 90.46
KXG38638 Sorghum cytosol 92.13 90.08
TraesCS1D01G086700.1 Wheat cytosol 74.12 89.05
Os07t0617800-01 Rice mitochondrion 57.35 84.19
GSMUA_Achr2P07320_001 Banana cytosol 82.82 82.14
Os03t0183600-00 Rice extracellular 79.71 79.22
PGSC0003DMT400012549 Potato cytosol, mitochondrion 76.4 75.77
HORVU1Hr1G018540.17 Barley cytosol, golgi, plastid 86.54 74.25
VIT_09s0002g00340.t01 Wine grape mitochondrion 79.92 73.38
Solyc03g123600.2.1 Tomato cytosol 73.08 72.93
KRH06285 Soybean mitochondrion 77.23 69.59
KRH47719 Soybean endoplasmic reticulum 77.02 68.76
CDY26256 Canola mitochondrion 75.78 68.16
Bra025984.1-P Field mustard cytosol, mitochondrion 75.78 68.16
AT1G17290.1 Thale cress mitochondrion 76.6 68.14
Solyc06g063090.2.1 Tomato extracellular 76.19 67.9
CDX83914 Canola mitochondrion 75.98 67.84
CDY48485 Canola plastid 75.57 67.59
Bra016607.1-P Field mustard mitochondrion 75.78 67.53
CDX96776 Canola mitochondrion 75.78 67.53
CDY21752 Canola mitochondrion 76.4 67.46
Bra026675.1-P Field mustard mitochondrion 76.4 67.34
CDX81815 Canola mitochondrion 76.19 67.03
AT1G72330.3 Thale cress mitochondrion 76.4 66.73
Os10t0390600-01 Rice mitochondrion 66.46 65.91
CDX68271 Canola mitochondrion 16.98 64.06
Os09t0433900-01 Rice cytosol 60.46 60.08
Solyc03g123610.2.1 Tomato plastid 72.26 57.59
Os07t0108300-01 Rice extracellular, nucleus, plasma membrane 53.0 52.78
CDY50645 Canola cytosol 23.4 52.31
Zm00001d014258_P002 Maize cytosol 89.65 48.98
CDX83913 Canola cytosol, nucleus, peroxisome 12.63 47.66
CDX68272 Canola nucleus 8.28 36.04
Os05t0196600-00 Rice cytosol 16.77 17.92
Os03t0727600-01 Rice cytosol 18.01 17.86
Os04t0578000-01 Rice cytosol 17.6 17.6
Os05t0319200-00 Rice cytosol, mitochondrion, plastid 17.81 17.34
Os06t0130400-01 Rice plasma membrane 19.05 16.97
Os01t0192900-00 Rice endoplasmic reticulum, plasma membrane 17.18 15.57
Os10t0390701-00 Rice cytosol 1.45 6.48
Protein Annotations
Gene3D:3.40.640.10Gene3D:3.90.1150.10MapMan:4.1.3.1.1EntrezGene:4348524ProteinID:ABB47494.1InterPro:Aminotransferase_I/II
ProteinID:BAF26418.1ncoils:CoilProteinID:EEE50893.1EMBL:EU267962GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0008483GO:GO:0009058GO:GO:0016740
GO:GO:0030170InterPro:IPR015421InterPro:IPR015422EMBL:KM051842EnsemblPlantsGene:Os10g0390500EnsemblPlants:Os10t0390500-01
PFAM:PF00155PANTHER:PTHR11751PANTHER:PTHR11751:SF466InterPro:PyrdxlP-dep_TrfaseInterPro:PyrdxlP-dep_Trfase_dom1InterPro:PyrdxlP-dep_Trfase_major
UniProt:Q338N8SUPFAM:SSF53383UniParc:UPI00000A0F08RefSeq:XP_015614438.1SEG:seg:
Description
ALANINE AMINOTRANSFERASEAlanine aminotransferase, Starch synthesis in developing seeds (Os10t0390500-01)
Coordinates
chr10:+:12968039..12974099
Molecular Weight (calculated)
52596.2 Da
IEP (calculated)
6.620
GRAVY (calculated)
-0.119
Length
483 amino acids
Sequence
(BLAST)
001: MAAPSVAVDN LNPKVLNCEY AVRGEIVIHA QRLQQQLQTQ PGSLPFDEIL YCNIGNPQSL GQKPVTFFRE VIALCDHPCL LEKEETKSLF SADAISRATT
101: ILASIPGRAT GAYSHSQGIK GLRDAIAAGI ASRDGYPANA DDIFLTDGAS PGVHMMMQLL IRNEKDGILC PIPQYPLYSA SIALHGGALV PYYLNESTGW
201: GLEISDLKKQ LEDSRLKGID VRALVVINPG NPTGQVLAEE NQRDIVKFCK NEGLVLLADE VYQENIYVDN KKFNSFKKIA RSMGYNEDDL PLVSFQSVSK
301: GYYGECGKRG GYMEITGFSA PVREQIYKVA SVNLCSNITG QILASLVMNP PKAGDASYAS YKAEKDGILQ SLARRAKALE NAFNSLEGIT CNKTEGAMYL
401: FPQLSLPQKA IDAAKAANKA PDAFYALRLL EATGIVVVPG SGFGQVPGTW HIRCTILPQE EKIPAIISRF KAFHEGFMAA YRD
Best Arabidopsis Sequence Match ( AT1G72330.1 )
(BLAST)
001: MRRFLINQAK GLVDHSRRQH HHKSPSFLSP QPRPLASSPP ALSRFFSSTS EMSASDSTSS LPVTLDSINP KVLKCEYAVR GEIVNIAQKL QEDLKTNKDA
101: YPFDEIIYCN IGNPQSLGQL PIKFFREVLA LCDHASLLDE SETHGLFSTD SIDRAWRILD HIPGRATGAY SHSQGIKGLR DVIAAGIEAR DGFPADPNDI
201: FLTDGASPAV HMMMQLLLSS EKDGILSPIP QYPLYSASIA LHGGSLVPYY LDEATGWGLE ISDLKKQLEE ARSKGISVRA LVVINPGNPT GQVLAEENQR
301: DIVNFCKQEG LVLLADEVYQ ENVYVPDKKF HSFKKVARSL GYGEKDISLV SFQSVSKGYY GECGKRGGYM EVTGFTSDVR EQIYKMASVN LCSNISGQIL
401: ASLVMSPPKP GDDSYDSYMA ERDGILSSMA KRAKTLEDAL NSLEGVTCNR AEGAMYLFPR INLPQKAIEA AEAEKTAPDA FYCKRLLNAT GVVVVPGSGF
501: GQVPGTWHFR CTILPQEDKI PAIVNRLTEF HKSFMDEFRN
Arabidopsis Description
ALAAT2alanine aminotransferase 2 [Source:TAIR;Acc:AT1G72330]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.