Factsheet for Os05t0319200-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0192900-00
Os03t0727600-01
Os05t0196600-00
Os05t0319200-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26200.1	Os03t0727600-01	AT2G22810.1	14983000
AT4G26200.1	Os01t0192900-00	AT4G26200.1	14983000
AT4G26200.1	Os05t0196600-00	AT4G26200.1	14983000
AT4G26200.1	Os05t0319200-00	AT4G26200.1	14983000

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G106600.1	Wheat	cytosol, plastid	73.59	80.75
Zm00001d039487_P001	Maize	mitochondrion	75.2	80.74
TraesCS3D01G108700.1	Wheat	cytosol, plastid	73.19	80.31
EES00139	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	74.8	80.13
TraesCS3B01G125200.1	Wheat	plastid	72.98	79.56
Os05t0196600-00	Rice	cytosol	70.56	77.43
HORVU3Hr1G019430.6	Barley	cytosol, mitochondrion	61.9	71.4
CDY72652	Canola	cytosol	28.43	70.15
Os01t0192900-00	Rice	endoplasmic reticulum, plasma membrane	74.6	69.42
KRH41440	Soybean	cytosol	60.08	67.73
KRH60148	Soybean	cytosol	59.68	67.27
AT4G26200.1	Thale cress	cytosol	60.28	66.89
CDX94359	Canola	cytosol	60.08	66.52
CDY71142	Canola	cytosol	59.88	66.29
CDX89355	Canola	cytosol	59.88	66.29
Bra026456.1-P	Field mustard	cytosol	59.88	66.29
VIT_11s0016g02560.t01	Wine grape	cytosol, nucleus, peroxisome	59.48	66.29
Bra019117.1-P	Field mustard	cytosol	60.08	66.08
CDY42751	Canola	cytosol	60.08	66.08
CDX92755	Canola	cytosol	54.84	65.38
Solyc07g026900.1.1	Tomato	cytosol	58.06	65.31
KRH49039	Soybean	cytosol	58.47	65.02
KRH74169	Soybean	cytosol	57.86	64.35
GSMUA_Achr10P...	Banana	cytosol	56.85	64.09
Solyc12g008740.1.1	Tomato	cytosol	56.05	64.06
GSMUA_Achr4P30870_001	Banana	cytosol	54.23	63.74
Os03t0727600-01	Rice	cytosol	53.02	54.0
Os04t0578000-01	Rice	cytosol	48.99	50.31
Os06t0130400-01	Rice	plasma membrane	38.51	35.24
Os07t0617800-01	Rice	mitochondrion	13.1	19.76
Os10t0390600-01	Rice	mitochondrion	18.55	18.89
Os09t0433900-01	Rice	cytosol	18.35	18.72
Os10t0390500-01	Rice	cytosol, plasma membrane, plastid	17.34	17.81
Os07t0108300-01	Rice	extracellular, nucleus, plasma membrane	17.14	17.53
Os03t0183600-00	Rice	extracellular	16.94	17.28
Os10t0390701-00	Rice	cytosol	0.6	2.78

Protein Annotations

EntrezGene:107275635	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.4.4	ProteinID:AAV44081.1	ProteinID:AAV44121.1
InterPro:Aminotransferase_I/II	ProteinID:BAS93346.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS
EnsemblPlantsGene:Os05g0319200	EnsemblPlants:Os05t0319200-00	PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795
PANTHER:PTHR43795:SF28	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	UniProt:Q5W6F9	SUPFAM:SSF53383
UniParc:UPI00004548D3	RefSeq:XP_015638322.1	SEG:seg	:	:	:

Description

ACC SYNTHASE 4Similar to 1-aminocyclopropane-1-carboxylic acid synthase. (Os05t0319200-00)

Coordinates

chr5:-:14821904..14824572

Molecular Weight (calculated)

53512.3 Da

IEP (calculated)

5.915

GRAVY (calculated)

-0.077

Length

496 amino acids

Sequence
(BLAST)

001: MGVKLLADGC AGASSSPALS RVATSAAHGE GSPYFAGWKA YDEDPYDAAA NPDGVIQMGL AENQVSIDLL EGYLREHPEA AAWGVAGDGG GDSFRDNALF
101: QDYHGLANFR KAMARFMEKI MGGKATFDPD RIVLTAGATA ANELLTFILA DPRDALLIPT PYYPGFDRDL RWRTGVNVVP VHCDSANGFQ VTAAALQAAH
201: DEAAAAGMRV RGVLITNPSN PLGTTARREA LEGILGFVAR NDIHLVSDEI YSGSVFAAPD LVSVAELVES SSSRARHRGE DDDGDVGVAD RVHVVYSLSK
301: DLGLPGFRVG VVYSRNDAVV AAARRMSSFT LVSSQTQRTL AAVLSDEAFV DAYVAANRAR LRERHDHVVA GLARAGVPCL RGNAGLFVWM DMRRLLLGDG
401: GDAATFAGEL RLWDRLLREV KLNVSPGSSC HCSEPGWFRV CFANMSLATL DVALERISRF MDAWCKATIG KFNHLQPNRC EVNYFALERY QGHVQQ

Best Arabidopsis Sequence Match ( AT4G26200.1 )
(BLAST)

001: MGLPLMMERS SNNNNVELSR VAVSDTHGED SPYFAGWKAY DENPYDESHN PSGVIQMGLA ENQVSFDLLE TYLEKKNPEG SMWGSKGAPG FRENALFQDY
101: HGLKTFRQAM ASFMEQIRGG KARFDPDRIV LTAGATAANE LLTFILADPN DALLVPTPYY PGFDRDLRWR TGVKIVPIHC DSSNHFQITP EALESAYQTA
201: RDANIRVRGV LITNPSNPLG ATVQKKVLED LLDFCVRKNI HLVSDEIYSG SVFHASEFTS VAEIVENIDD VSVKERVHIV YSLSKDLGLP GFRVGTIYSY
301: NDNVVRTARR MSSFTLVSSQ TQHMLASMLS DEEFTEKYIR INRERLRRRY DTIVEGLKKA GIECLKGNAG LFCWMNLGFL LEKKTKDGEL QLWDVILKEL
401: NLNISPGSSC HCSEVGWFRV CFANMSENTL EIALKRIHEF MDRRRRF

Arabidopsis Description

ACS71-aminocyclopropane-1-carboxylate synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STR4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.