Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G106600.1 | Wheat | cytosol, plastid | 98.89 | 98.89 |
| TraesCS3B01G125200.1 | Wheat | plastid | 98.45 | 97.8 |
| EES00139 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 87.83 | 85.75 |
| HORVU3Hr1G019430.6 | Barley | cytosol, mitochondrion | 80.97 | 85.12 |
| Zm00001d039487_P001 | Maize | mitochondrion | 85.84 | 83.98 |
| Os05t0319200-00 | Rice | cytosol, mitochondrion, plastid | 80.31 | 73.19 |
| CDY72652 | Canola | cytosol | 31.86 | 71.64 |
| KRH41440 | Soybean | cytosol | 68.36 | 70.23 |
| KRH60148 | Soybean | cytosol | 67.48 | 69.32 |
| VIT_11s0016g02560.t01 | Wine grape | cytosol, nucleus, peroxisome | 67.92 | 68.99 |
| Bra019117.1-P | Field mustard | cytosol | 68.58 | 68.74 |
| CDY42751 | Canola | cytosol | 68.58 | 68.74 |
| AT4G26200.1 | Thale cress | cytosol | 67.92 | 68.68 |
| KRH49039 | Soybean | cytosol | 67.48 | 68.39 |
| GSMUA_Achr10P... | Banana | cytosol | 66.37 | 68.18 |
| Bra026456.1-P | Field mustard | cytosol | 67.48 | 68.08 |
| CDX94359 | Canola | cytosol | 67.26 | 67.86 |
| CDY71142 | Canola | cytosol | 67.26 | 67.86 |
| CDX89355 | Canola | cytosol | 67.26 | 67.86 |
| Solyc12g008740.1.1 | Tomato | cytosol | 64.82 | 67.51 |
| CDX92755 | Canola | cytosol | 61.95 | 67.31 |
| KRH74169 | Soybean | cytosol | 66.37 | 67.26 |
| Solyc07g026900.1.1 | Tomato | cytosol | 65.04 | 66.67 |
| GSMUA_Achr4P30870_001 | Banana | cytosol | 62.17 | 66.59 |
| TraesCS4D01G058200.1 | Wheat | cytosol | 55.53 | 51.75 |
| TraesCS2D01G394200.1 | Wheat | cytosol | 53.98 | 50.21 |
| TraesCS7D01G060600.2 | Wheat | golgi, mitochondrion | 44.69 | 39.45 |
| TraesCS1D01G086700.1 | Wheat | cytosol | 16.81 | 18.91 |
| TraesCS5D01G224200.1 | Wheat | cytosol | 19.91 | 18.22 |
| TraesCS5D01G070800.1 | Wheat | cytosol | 18.81 | 17.49 |
| TraesCS2D01G262400.2 | Wheat | cytosol | 18.14 | 16.43 |
| TraesCS2D01G175200.1 | Wheat | golgi | 19.47 | 15.8 |
Protein Annotations
| MapMan:11.5.1.1 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | InterPro:Aminotransferase_I/II | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0030170 | InterPro:IPR015421 |
| InterPro:IPR015422 | InterPro:NHTrfase_class1_PyrdxlP-BS | PFAM:PF00155 | PRINTS:PR00753 | ScanProsite:PS00105 | PANTHER:PTHR43795 |
| PANTHER:PTHR43795:SF28 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | SUPFAM:SSF53383 | EnsemblPlantsGene:TraesCS3D01G108700 |
| EnsemblPlants:TraesCS3D01G108700.1 | TIGR:cd00609 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3D:+:61802751..61804291
Molecular Weight (calculated)
49342.7 Da
IEP (calculated)
6.193
GRAVY (calculated)
-0.054
Length
452 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLPAASSPP LSRVATSSAH GEDSPYFAGW RAYDDDPYDA VTNPGGVIQM GLAENQVSFD LLEGFLREHP EAAGWGGARP GSGVASFRDN ALFQDYHGLK
101: TFRKAMASFM EKIRGGKVRF DPDRIVLTAG ATAANELLTF ILANPGDALL IPTPYYPGFD RDLRWRTGVN IVPVHCHSSN GFQVTVAALE AAYEEAAAAG
201: MSVRGVLLTN PSNPLGTTVE RSVLEDVLDF VVRKNIHLIS DEIYSGSVFA APDLVSVAEL VESRGDDVAG RVHIVYSLSK DLGLPGFRVG VVYSYNDAVV
301: TAARRMSSFT LVSSQTQKTL AAMLSDAAFA QEYIRTNRER LRVRHDHMVA GLARSGVPCL PSNAGLFVWM DMRRLLGDGG EATVANELRL WDLMLHEVKL
401: NISPGSSCHC SEPGWFRVCF ANMSLDTLDV ALARMSRFMD RWNKATTLQE HH
101: TFRKAMASFM EKIRGGKVRF DPDRIVLTAG ATAANELLTF ILANPGDALL IPTPYYPGFD RDLRWRTGVN IVPVHCHSSN GFQVTVAALE AAYEEAAAAG
201: MSVRGVLLTN PSNPLGTTVE RSVLEDVLDF VVRKNIHLIS DEIYSGSVFA APDLVSVAEL VESRGDDVAG RVHIVYSLSK DLGLPGFRVG VVYSYNDAVV
301: TAARRMSSFT LVSSQTQKTL AAMLSDAAFA QEYIRTNRER LRVRHDHMVA GLARSGVPCL PSNAGLFVWM DMRRLLGDGG EATVANELRL WDLMLHEVKL
401: NISPGSSCHC SEPGWFRVCF ANMSLDTLDV ALARMSRFMD RWNKATTLQE HH
001: MGLPLMMERS SNNNNVELSR VAVSDTHGED SPYFAGWKAY DENPYDESHN PSGVIQMGLA ENQVSFDLLE TYLEKKNPEG SMWGSKGAPG FRENALFQDY
101: HGLKTFRQAM ASFMEQIRGG KARFDPDRIV LTAGATAANE LLTFILADPN DALLVPTPYY PGFDRDLRWR TGVKIVPIHC DSSNHFQITP EALESAYQTA
201: RDANIRVRGV LITNPSNPLG ATVQKKVLED LLDFCVRKNI HLVSDEIYSG SVFHASEFTS VAEIVENIDD VSVKERVHIV YSLSKDLGLP GFRVGTIYSY
301: NDNVVRTARR MSSFTLVSSQ TQHMLASMLS DEEFTEKYIR INRERLRRRY DTIVEGLKKA GIECLKGNAG LFCWMNLGFL LEKKTKDGEL QLWDVILKEL
401: NLNISPGSSC HCSEVGWFRV CFANMSENTL EIALKRIHEF MDRRRRF
101: HGLKTFRQAM ASFMEQIRGG KARFDPDRIV LTAGATAANE LLTFILADPN DALLVPTPYY PGFDRDLRWR TGVKIVPIHC DSSNHFQITP EALESAYQTA
201: RDANIRVRGV LITNPSNPLG ATVQKKVLED LLDFCVRKNI HLVSDEIYSG SVFHASEFTS VAEIVENIDD VSVKERVHIV YSLSKDLGLP GFRVGTIYSY
301: NDNVVRTARR MSSFTLVSSQ TQHMLASMLS DEEFTEKYIR INRERLRRRY DTIVEGLKKA GIECLKGNAG LFCWMNLGFL LEKKTKDGEL QLWDVILKEL
401: NLNISPGSSC HCSEVGWFRV CFANMSENTL EIALKRIHEF MDRRRRF
Arabidopsis Description
ACS71-aminocyclopropane-1-carboxylate synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STR4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.