Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71142 | Canola | cytosol | 99.11 | 99.11 |
| CDX89355 | Canola | cytosol | 98.44 | 98.44 |
| AT4G26200.1 | Thale cress | cytosol | 96.21 | 96.42 |
| CDY42751 | Canola | cytosol | 93.75 | 93.13 |
| CDX92755 | Canola | cytosol | 86.16 | 92.79 |
| CDY72652 | Canola | cytosol | 41.07 | 91.54 |
| KRH41440 | Soybean | cytosol | 77.01 | 78.41 |
| KRH60148 | Soybean | cytosol | 77.01 | 78.41 |
| KRH49039 | Soybean | cytosol | 77.46 | 77.8 |
| KRH74169 | Soybean | cytosol | 76.34 | 76.68 |
| VIT_11s0016g02560.t01 | Wine grape | cytosol, nucleus, peroxisome | 75.45 | 75.96 |
| PGSC0003DMT400000771 | Potato | cytosol | 72.77 | 75.12 |
| PGSC0003DMT400043903 | Potato | cytosol | 73.66 | 74.83 |
| Solyc07g026900.1.1 | Tomato | cytosol | 73.66 | 74.83 |
| Solyc12g008740.1.1 | Tomato | cytosol | 71.88 | 74.19 |
| GSMUA_Achr10P... | Banana | cytosol | 68.08 | 69.32 |
| GSMUA_Achr4P30870_001 | Banana | cytosol | 64.51 | 68.48 |
| EES00139 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 70.09 | 67.82 |
| TraesCS3D01G108700.1 | Wheat | cytosol, plastid | 67.86 | 67.26 |
| TraesCS3A01G106600.1 | Wheat | cytosol, plastid | 67.63 | 67.04 |
| TraesCS3B01G125200.1 | Wheat | plastid | 67.63 | 66.59 |
| Zm00001d039487_P001 | Maize | mitochondrion | 67.86 | 65.8 |
| Os05t0196600-00 | Rice | cytosol | 64.73 | 64.16 |
| HORVU3Hr1G019430.6 | Barley | cytosol, mitochondrion | 58.48 | 60.93 |
| CDY66472 | Canola | cytosol | 54.46 | 60.55 |
| Os05t0319200-00 | Rice | cytosol, mitochondrion, plastid | 66.52 | 60.08 |
| CDX75675 | Canola | cytosol | 57.59 | 57.21 |
| Os01t0192900-00 | Rice | endoplasmic reticulum, plasma membrane | 67.41 | 56.66 |
| CDY69462 | Canola | cytosol | 58.71 | 56.08 |
| CDX69326 | Canola | cytosol | 58.04 | 55.44 |
| CDY34015 | Canola | cytosol | 56.03 | 54.09 |
| CDX83146 | Canola | cytosol | 55.8 | 53.88 |
| CDY25639 | Canola | cytosol | 56.7 | 53.59 |
| CDX89520 | Canola | cytosol | 56.25 | 53.16 |
| CDY02111 | Canola | cytosol | 55.58 | 52.98 |
| CDX81296 | Canola | cytosol | 51.79 | 52.85 |
| CDY23035 | Canola | cytosol | 54.91 | 52.79 |
| CDY08163 | Canola | cytosol | 55.36 | 52.77 |
| CDY18674 | Canola | cytosol | 51.56 | 52.62 |
| CDY05953 | Canola | cytosol | 55.13 | 52.55 |
| CDY11360 | Canola | cytosol | 53.57 | 50.74 |
| CDY65356 | Canola | cytosol | 53.35 | 50.53 |
| CDY13251 | Canola | cytosol | 54.69 | 49.9 |
| CDX86796 | Canola | cytosol | 54.02 | 49.59 |
| CDY15174 | Canola | cytosol | 54.46 | 49.19 |
| CDX90035 | Canola | cytosol | 47.32 | 47.43 |
| CDY46931 | Canola | mitochondrion, plastid | 41.96 | 37.6 |
| CDX91604 | Canola | mitochondrion, plastid | 41.52 | 37.2 |
| CDY45474 | Canola | cytosol | 38.84 | 33.27 |
| CDY45965 | Canola | cytosol | 39.73 | 32.78 |
| HORVU3Hr1G019410.1 | Barley | endoplasmic reticulum | 15.4 | 29.87 |
| CDY43579 | Canola | cytosol, mitochondrion, plastid | 12.72 | 29.69 |
| CDX91708 | Canola | peroxisome | 19.2 | 21.34 |
| CDY25780 | Canola | peroxisome | 18.75 | 20.84 |
| CDY66294 | Canola | cytosol | 21.65 | 20.17 |
| CDY44130 | Canola | cytosol | 21.43 | 20.08 |
| CDY41452 | Canola | peroxisome | 21.43 | 20.08 |
| CDY04729 | Canola | cytosol | 21.43 | 20.08 |
| CDY61225 | Canola | peroxisome | 21.43 | 19.96 |
| CDX68271 | Canola | mitochondrion | 5.58 | 19.53 |
| CDY26256 | Canola | mitochondrion | 22.77 | 18.99 |
| CDY50645 | Canola | cytosol | 9.15 | 18.98 |
| CDY48485 | Canola | plastid | 22.54 | 18.7 |
| CDX96776 | Canola | mitochondrion | 22.54 | 18.63 |
| CDY03822 | Canola | cytosol | 5.36 | 18.6 |
| CDX83914 | Canola | mitochondrion | 22.32 | 18.48 |
| CDX81815 | Canola | mitochondrion | 22.32 | 18.21 |
| CDY21752 | Canola | mitochondrion | 22.1 | 18.1 |
| CDY12474 | Canola | peroxisome, plastid | 20.54 | 17.13 |
| CDX91589 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 4.69 | 16.03 |
| CDX88411 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 4.69 | 16.03 |
| CDX86159 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 4.69 | 16.03 |
| CDY25781 | Canola | cytosol | 2.01 | 15.52 |
| CDX83913 | Canola | cytosol, nucleus, peroxisome | 4.24 | 14.84 |
| CDX68272 | Canola | nucleus | 3.57 | 14.41 |
| CDX86161 | Canola | cytosol | 2.68 | 9.09 |
Protein Annotations
| MapMan:11.5.1.1 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | GO:A0A078E137 | InterPro:Aminotransferase_I/II | EnsemblPlants:CDX94359 |
| ProteinID:CDX94359 | ProteinID:CDX94359.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0030170 | EnsemblPlantsGene:GSBRNA2T00157477001 | InterPro:IPR015421 | InterPro:IPR015422 |
| InterPro:NHTrfase_class1_PyrdxlP-BS | PFAM:PF00155 | PRINTS:PR00753 | ScanProsite:PS00105 | PANTHER:PTHR43795 | PANTHER:PTHR43795:SF28 |
| InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | SUPFAM:SSF53383 | UniParc:UPI0004EE8588 | SEG:seg |
Description
BnaC01g18250D
Coordinates
chrLK031881:-:483080..484686
Molecular Weight (calculated)
50802.5 Da
IEP (calculated)
6.152
GRAVY (calculated)
-0.331
Length
448 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLPLMMERS SNNNNVVELS RVAVSDTHGE DSPYFAGWKA YDENPYEESH NPSGVIQMGL AENQVSFDLL ESYLEKKNPE GSMWGSKGAP GFRENALFQD
101: YHGLKSFRQA MASFMQQIRG GKARFDPDRI VLTAGATAAN ELLTFILADP NDALLVPTPY YPGFDRDLRW RTGVRIVPIH CDSSNHFQIT PEALEQAYQT
201: ARDANIRVRG VLITNPSNPL GATVQKKVLE DLLDFCVRKN IHLVSDEIYS GSVFHASEFT SVAEIVENID DVSVKERVHI VYSLSKDLGL PGFRVGTIYS
301: YNDNVVRTAR RMSSFTLVSS QTQHMLASML SDEEFTEKYI RINRERLRRR YETIVEGLKK AGIECLKGNA GLFCWMNLGF LLDTKTKQGE LELWDVILKE
401: LKLNISPGSS CHCSEYGWFR VCFANMSEKT LEIALERIHE FMDRRRGF
101: YHGLKSFRQA MASFMQQIRG GKARFDPDRI VLTAGATAAN ELLTFILADP NDALLVPTPY YPGFDRDLRW RTGVRIVPIH CDSSNHFQIT PEALEQAYQT
201: ARDANIRVRG VLITNPSNPL GATVQKKVLE DLLDFCVRKN IHLVSDEIYS GSVFHASEFT SVAEIVENID DVSVKERVHI VYSLSKDLGL PGFRVGTIYS
301: YNDNVVRTAR RMSSFTLVSS QTQHMLASML SDEEFTEKYI RINRERLRRR YETIVEGLKK AGIECLKGNA GLFCWMNLGF LLDTKTKQGE LELWDVILKE
401: LKLNISPGSS CHCSEYGWFR VCFANMSEKT LEIALERIHE FMDRRRGF
001: MGLPLMMERS SNNNNVELSR VAVSDTHGED SPYFAGWKAY DENPYDESHN PSGVIQMGLA ENQVSFDLLE TYLEKKNPEG SMWGSKGAPG FRENALFQDY
101: HGLKTFRQAM ASFMEQIRGG KARFDPDRIV LTAGATAANE LLTFILADPN DALLVPTPYY PGFDRDLRWR TGVKIVPIHC DSSNHFQITP EALESAYQTA
201: RDANIRVRGV LITNPSNPLG ATVQKKVLED LLDFCVRKNI HLVSDEIYSG SVFHASEFTS VAEIVENIDD VSVKERVHIV YSLSKDLGLP GFRVGTIYSY
301: NDNVVRTARR MSSFTLVSSQ TQHMLASMLS DEEFTEKYIR INRERLRRRY DTIVEGLKKA GIECLKGNAG LFCWMNLGFL LEKKTKDGEL QLWDVILKEL
401: NLNISPGSSC HCSEVGWFRV CFANMSENTL EIALKRIHEF MDRRRRF
101: HGLKTFRQAM ASFMEQIRGG KARFDPDRIV LTAGATAANE LLTFILADPN DALLVPTPYY PGFDRDLRWR TGVKIVPIHC DSSNHFQITP EALESAYQTA
201: RDANIRVRGV LITNPSNPLG ATVQKKVLED LLDFCVRKNI HLVSDEIYSG SVFHASEFTS VAEIVENIDD VSVKERVHIV YSLSKDLGLP GFRVGTIYSY
301: NDNVVRTARR MSSFTLVSSQ TQHMLASMLS DEEFTEKYIR INRERLRRRY DTIVEGLKKA GIECLKGNAG LFCWMNLGFL LEKKTKDGEL QLWDVILKEL
401: NLNISPGSSC HCSEVGWFRV CFANMSENTL EIALKRIHEF MDRRRRF
Arabidopsis Description
ACS71-aminocyclopropane-1-carboxylate synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STR4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.