Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75675 | Canola | cytosol | 94.88 | 98.67 |
| CDY69462 | Canola | cytosol | 94.67 | 94.67 |
| CDY66472 | Canola | cytosol | 81.02 | 94.29 |
| AT4G37770.1 | Thale cress | cytosol | 91.9 | 91.9 |
| CDY25639 | Canola | cytosol | 80.81 | 79.96 |
| CDX89520 | Canola | cytosol | 80.6 | 79.75 |
| CDY23035 | Canola | cytosol | 78.46 | 78.97 |
| CDY02111 | Canola | cytosol | 79.1 | 78.94 |
| Solyc02g063540.1.1 | Tomato | cytosol | 47.76 | 78.87 |
| CDY08163 | Canola | cytosol | 78.25 | 78.09 |
| CDY05953 | Canola | cytosol | 78.25 | 78.09 |
| CDX81296 | Canola | cytosol | 72.28 | 77.22 |
| CDY18674 | Canola | cytosol | 72.28 | 77.22 |
| PGSC0003DMT400008587 | Potato | cytosol | 75.69 | 77.01 |
| PGSC0003DMT400008605 | Potato | cytosol | 69.08 | 76.6 |
| VIT_00s0840g00010.t01 | Wine grape | cytosol | 76.55 | 76.55 |
| VIT_00s1437g00010.t01 | Wine grape | cytosol | 76.33 | 76.33 |
| PGSC0003DMT400055203 | Potato | cytosol | 75.48 | 75.48 |
| Solyc02g091990.2.1 | Tomato | cytosol | 75.48 | 75.48 |
| Solyc03g043890.2.1 | Tomato | cytosol | 73.99 | 73.67 |
| PGSC0003DMT400013977 | Potato | cytosol | 58.21 | 73.19 |
| KRH77167 | Soybean | cytosol | 72.49 | 72.34 |
| KRH04373 | Soybean | cytosol | 72.92 | 72.0 |
| KRH28319 | Soybean | cytosol | 72.07 | 71.76 |
| GSMUA_Achr3P25830_001 | Banana | mitochondrion | 68.23 | 71.27 |
| GSMUA_Achr1P14280_001 | Banana | nucleus | 69.3 | 71.12 |
| GSMUA_Achr2P08600_001 | Banana | cytosol | 70.15 | 71.06 |
| KRH58165 | Soybean | cytosol | 72.49 | 70.83 |
| GSMUA_Achr4P01340_001 | Banana | mitochondrion | 68.87 | 69.91 |
| GSMUA_Achr5P08880_001 | Banana | cytosol | 69.3 | 69.74 |
| GSMUA_Achr1P04420_001 | Banana | cytosol | 67.8 | 68.83 |
| CDY34015 | Canola | cytosol | 66.31 | 67.03 |
| CDX83146 | Canola | cytosol | 66.1 | 66.81 |
| TraesCS4A01G256500.1 | Wheat | cytosol | 66.31 | 64.12 |
| TraesCS4B01G058200.1 | Wheat | cytosol | 66.31 | 64.12 |
| Zm00001d033862_P001 | Maize | cytosol | 66.31 | 64.12 |
| TraesCS4D01G058200.1 | Wheat | cytosol | 66.1 | 63.92 |
| Os03t0727600-01 | Rice | cytosol | 66.1 | 63.66 |
| EER90948 | Sorghum | cytosol | 66.1 | 62.37 |
| CDY71142 | Canola | cytosol | 55.86 | 58.48 |
| CDX89355 | Canola | cytosol | 55.65 | 58.26 |
| CDY42751 | Canola | cytosol | 55.86 | 58.09 |
| CDX94359 | Canola | cytosol | 55.44 | 58.04 |
| CDX92755 | Canola | cytosol | 50.53 | 56.97 |
| CDY72652 | Canola | cytosol | 24.31 | 56.72 |
| HORVU4Hr1G009800.5 | Barley | cytosol, plastid | 65.25 | 53.59 |
| CDY11360 | Canola | cytosol | 52.88 | 52.43 |
| CDY65356 | Canola | cytosol | 52.03 | 51.59 |
| CDX86796 | Canola | cytosol | 52.67 | 50.61 |
| CDY13251 | Canola | cytosol | 52.88 | 50.51 |
| CDY15174 | Canola | cytosol | 53.09 | 50.2 |
| CDX90035 | Canola | cytosol | 47.55 | 49.89 |
| CDY46931 | Canola | mitochondrion, plastid | 41.15 | 38.6 |
| CDX91604 | Canola | mitochondrion, plastid | 41.15 | 38.6 |
| CDY43579 | Canola | cytosol, mitochondrion, plastid | 15.14 | 36.98 |
| CDY45474 | Canola | cytosol | 39.02 | 34.99 |
| CDY45965 | Canola | cytosol | 39.23 | 33.89 |
| CDX68271 | Canola | mitochondrion | 5.97 | 21.88 |
| CDX91708 | Canola | peroxisome | 17.91 | 20.84 |
| CDY25780 | Canola | peroxisome | 17.7 | 20.6 |
| CDY41452 | Canola | peroxisome | 19.83 | 19.46 |
| CDY66294 | Canola | cytosol | 19.83 | 19.33 |
| CDY04729 | Canola | cytosol | 19.62 | 19.25 |
| CDY44130 | Canola | cytosol | 19.62 | 19.25 |
| CDY50645 | Canola | cytosol | 8.74 | 18.98 |
| CDY61225 | Canola | peroxisome | 19.4 | 18.92 |
| CDX83914 | Canola | mitochondrion | 20.47 | 17.74 |
| CDY26256 | Canola | mitochondrion | 20.26 | 17.69 |
| CDY48485 | Canola | plastid | 20.26 | 17.59 |
| CDX96776 | Canola | mitochondrion | 19.83 | 17.16 |
| CDX81815 | Canola | mitochondrion | 20.04 | 17.12 |
| CDY21752 | Canola | mitochondrion | 19.83 | 17.0 |
| CDX83913 | Canola | cytosol, nucleus, peroxisome | 4.48 | 16.41 |
| CDY12474 | Canola | peroxisome, plastid | 18.76 | 16.39 |
| CDY03822 | Canola | cytosol | 4.26 | 15.5 |
| CDX68272 | Canola | nucleus | 3.62 | 15.32 |
| CDX86159 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 4.26 | 15.27 |
| CDX88411 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 4.26 | 15.27 |
| CDX91589 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 4.26 | 15.27 |
| CDY25781 | Canola | cytosol | 1.71 | 13.79 |
| CDX86161 | Canola | cytosol | 2.99 | 10.61 |
Protein Annotations
| MapMan:11.5.1.1 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | GO:A0A078BWZ1 | InterPro:Aminotransferase_I/II | EnsemblPlants:CDX69326 |
| ProteinID:CDX69326 | ProteinID:CDX69326.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0030170 | EnsemblPlantsGene:GSBRNA2T00131162001 | InterPro:IPR015421 | InterPro:IPR015422 |
| InterPro:NHTrfase_class1_PyrdxlP-BS | PFAM:PF00155 | PRINTS:PR00753 | ScanProsite:PS00105 | PANTHER:PTHR43795 | PANTHER:PTHR43795:SF10 |
| InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | SUPFAM:SSF53383 | UniParc:UPI0004EE3BCC | : |
Description
BnaC01g01270D
Coordinates
chrLK031789:+:4170777..4172679
Molecular Weight (calculated)
53163.7 Da
IEP (calculated)
8.000
GRAVY (calculated)
-0.346
Length
469 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLLSRKVTC NAHGQDSSYF LGWEEYEKNP YDDIKNPDGI IQMGLAENQL SFDLIEAWLA KNPEAANFER EGQSIFRELA LFQDYHGLPS FKKAMADFMS
101: ENRGNRVSFD PKKLVLTAGA TSANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIQCTSANG FRITKSALEE AYEQAQKLNL KVKGVLITNP
201: SNPLGTTTTR TELNHLLDFV SRKNIHLISD EIYSGTVFTS PGFISVMEVL KEKKLENTDV SKRVHIVYSL SKDLGLPGFR VGVIYSNDDI VVDAATKMSS
301: FGLISSQTQY LLSALLSDKN FTKNYLRENQ IRLKKRHMKL VSGLEAAGIE CLKSNAGLFC WVDMRHLLSS NTFEAEIELW KKIVYEVKLN ISPGSSCHCN
401: EPGWFRVCFA NMSEETLKVA MNRLKMFVDG PSSSTRSQSE HQRLKRLRKM KVSNWVFRLS FQDREPEER
101: ENRGNRVSFD PKKLVLTAGA TSANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIQCTSANG FRITKSALEE AYEQAQKLNL KVKGVLITNP
201: SNPLGTTTTR TELNHLLDFV SRKNIHLISD EIYSGTVFTS PGFISVMEVL KEKKLENTDV SKRVHIVYSL SKDLGLPGFR VGVIYSNDDI VVDAATKMSS
301: FGLISSQTQY LLSALLSDKN FTKNYLRENQ IRLKKRHMKL VSGLEAAGIE CLKSNAGLFC WVDMRHLLSS NTFEAEIELW KKIVYEVKLN ISPGSSCHCN
401: EPGWFRVCFA NMSEETLKVA MNRLKMFVDG PSSSTRSQSE HQRLKRLRKM KVSNWVFRLS FQDREPEER
001: MGLLSKKASC NTHGQDSSYF WGWEEYEKNP YDEIKNPDGI IQMGLAENQL SFDLIESWLA KNPDAANFQR EGQSIFRELA LFQDYHGLPS FKNAMADFMS
101: ENRGNRVSFN PNKLVLTAGA TPANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIQCKSANG FRITKVALEE AYEQAQKLNL KVKGVLITNP
201: SNPLGTTTTR TELNHLLDFI SRKKIHLISD EIYSGTVFTN PGFISVMEVL KDRKLENTDV FDRVHIVYSL SKDLGLPGFR VGVIYSNDDF VVSAATKMSS
301: FGLISSQTQY LLSALLSDKT FTKNYLEENQ IRLKNRHKKL VSGLEAAGIE CLKSNAGLFC WVDMRHLLKS NTFEAEIELW KKIVYEVKLN ISPGSSCHCN
401: EPGWFRVCFA NLSEETLKVA LDRLKRFVDG PSPTRRSQSE HQRLKNLRKM KVSNWVFRLS FHDREPEER
101: ENRGNRVSFN PNKLVLTAGA TPANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIQCKSANG FRITKVALEE AYEQAQKLNL KVKGVLITNP
201: SNPLGTTTTR TELNHLLDFI SRKKIHLISD EIYSGTVFTN PGFISVMEVL KDRKLENTDV FDRVHIVYSL SKDLGLPGFR VGVIYSNDDF VVSAATKMSS
301: FGLISSQTQY LLSALLSDKT FTKNYLEENQ IRLKNRHKKL VSGLEAAGIE CLKSNAGLFC WVDMRHLLKS NTFEAEIELW KKIVYEVKLN ISPGSSCHCN
401: EPGWFRVCFA NLSEETLKVA LDRLKRFVDG PSPTRRSQSE HQRLKNLRKM KVSNWVFRLS FHDREPEER
Arabidopsis Description
ACS81-aminocyclopropane-1-carboxylate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q56Y32]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.