Factsheet for HORVU4Hr1G009800.5

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G094230.2
HORVU2Hr1G119180.1
HORVU3Hr1G019410.1
HORVU3Hr1G019430.6
HORVU4Hr1G009800.5
HORVU4Hr1G055900.5

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G22810.1	HORVU4Hr1G009800.5	AT2G22810.1	14983000
AT2G22810.1	HORVU2Hr1G094230.2	AT4G11280.1	14983000
AT2G22810.1	HORVU3Hr1G019410.1	AT4G26200.1	14983000
AT2G22810.1	HORVU3Hr1G019430.6	AT4G26200.1	14983000
AT2G22810.1	HORVU4Hr1G009800.5	AT4G37770.1	14983000
AT4G37770.1	HORVU4Hr1G009800.5	AT2G22810.1	14983000
AT4G37770.1	HORVU4Hr1G009800.5	AT4G37770.1	14983000
AT5G65800.1	HORVU2Hr1G119180.1	AT4G02680.1	15118728
AT5G65800.1	HORVU4Hr1G055900.5	AT5G58550.1	15118728

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G256500.1	Wheat	cytosol	82.14	96.7
TraesCS4D01G058200.1	Wheat	cytosol	81.96	96.49
TraesCS4B01G058200.1	Wheat	cytosol	81.61	96.08
Os03t0727600-01	Rice	cytosol	72.33	84.8
Zm00001d033862_P001	Maize	cytosol	69.18	81.44
EER90948	Sorghum	cytosol	69.88	80.28
GSMUA_Achr5P08880_001	Banana	cytosol	57.27	70.17
Solyc02g063540.1.1	Tomato	cytosol	34.5	69.37
GSMUA_Achr1P14280_001	Banana	nucleus	55.34	69.15
CDY66472	Canola	cytosol	48.69	68.98
GSMUA_Achr4P01340_001	Banana	mitochondrion	55.52	68.61
GSMUA_Achr1P04420_001	Banana	cytosol	55.52	68.61
GSMUA_Achr3P25830_001	Banana	mitochondrion	53.06	67.48
CDX75675	Canola	cytosol	53.24	67.41
GSMUA_Achr2P08600_001	Banana	cytosol	54.64	67.39
PGSC0003DMT400008587	Potato	cytosol	54.29	67.25
Solyc02g091990.2.1	Tomato	cytosol	54.47	66.31
PGSC0003DMT400055203	Potato	cytosol	54.12	65.88
PGSC0003DMT400008605	Potato	cytosol	48.69	65.72
Bra010611.1-P	Field mustard	cytosol	53.94	65.67
CDY69462	Canola	cytosol	53.77	65.46
AT4G37770.1	Thale cress	cytosol	53.77	65.46
CDX69326	Canola	cytosol	53.59	65.25
Bra011784.1-P	Field mustard	cytosol	53.59	65.25
KRH04373	Soybean	cytosol	54.12	65.05
VIT_00s0840g00010.t01	Wine grape	cytosol	53.06	64.61
VIT_00s1437g00010.t01	Wine grape	cytosol	53.06	64.61
KRH58165	Soybean	cytosol	54.29	64.58
KRH77167	Soybean	cytosol	52.89	64.26
Solyc03g043890.2.1	Tomato	cytosol	52.89	64.12
CDY23035	Canola	cytosol	52.19	63.95
KRH28319	Soybean	cytosol	52.71	63.91
AT3G49700.1	Thale cress	cytosol	52.36	63.62
Bra012924.1-P	Field mustard	cytosol	52.36	63.62
CDY02111	Canola	cytosol	52.36	63.62
CDY08163	Canola	cytosol	52.36	63.62
CDY05953	Canola	cytosol	52.19	63.4
Bra030199.1-P	Field mustard	cytosol	52.54	63.29
CDY25639	Canola	cytosol	52.54	63.29
Bra017962.1-P	Field mustard	cytosol	52.01	63.19
AT5G65800.1	Thale cress	cytosol	51.66	62.77
CDX89520	Canola	cytosol	52.01	62.66
Bra031846.1-P	Field mustard	cytosol	51.31	62.34
PGSC0003DMT400013977	Potato	cytosol	40.63	62.2
Bra037829.1-P	Field mustard	cytosol	47.46	61.73
CDX81296	Canola	cytosol	47.46	61.73
Bra024420.1-P	Field mustard	cytosol	50.79	61.7
AT2G22810.1	Thale cress	cytosol	51.14	61.6
CDY18674	Canola	cytosol	47.29	61.5
HORVU3Hr1G019430.6	Barley	cytosol, mitochondrion	38.88	51.63
HORVU7Hr1G053970.1	Barley	mitochondrion	6.83	50.0
HORVU3Hr1G098750.1	Barley	cytosol, peroxisome	5.08	49.15
HORVU2Hr1G119710.1	Barley	mitochondrion	7.88	46.39
HORVU2Hr1G094230.2	Barley	cytosol	33.98	40.08
HORVU7Hr1G012940.1	Barley	cytosol	35.9	34.22
HORVU3Hr1G016440.3	Barley	cytosol	14.01	25.64
HORVU3Hr1G019410.1	Barley	endoplasmic reticulum	10.16	25.11
HORVU2Hr1G063740.6	Barley	peroxisome, vacuole	14.89	17.49
HORVU5Hr1G062990.1	Barley	cytosol	15.76	17.34
HORVU2Hr1G030820.1	Barley	mitochondrion	15.24	15.62
HORVU1Hr1G018540.17	Barley	cytosol, golgi, plastid	14.71	14.92
HORVU7Hr1G074250.1	Barley	cytosol, peroxisome	1.93	14.47
HORVU5Hr1G014730.8	Barley	cytosol, plastid, vacuole	6.13	11.04

Protein Annotations

MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	UniProt:A0A287N5H4	InterPro:Aminotransferase_I/II	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0030170	EnsemblPlantsGene:HORVU4Hr1G009800	EnsemblPlants:HORVU4Hr1G009800.5	InterPro:IPR015421	InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS
PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF10	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI000B4826A1	SEG:seg	:

Description

No Description!

Coordinates

chrchr4H:-:28668626..28670955

Molecular Weight (calculated)

62761.0 Da

IEP (calculated)

7.847

GRAVY (calculated)

-0.201

Length

571 amino acids

Sequence
(BLAST)

001: PPPLHSSSSS LNFLPACLTD CLLSQLSLDN TRSRLSSVPS IDPPVSNPGQ TRAQHSLTDE MVNKVADEPQ LLSKKAGCNT HGQDSSYFLG WEEYEKNPFH
101: PTTNPTGIIQ MGLAENQLSF DLVEEWLEKN PDALGLRRGP ASVFRELALF QDYHGLPAFK NVIPPATWHT PQQPFQMRSK TDARCFAQAL ARFMSEQRDH
201: KVAFDPSNIV LTAGATSANE ALMFCLADQG DAFLIPTPYY PGFDRDLKWR TGAEIVPVHC TSANGFRVTR AALDDAYRRA QKRRLRVKGV LITNPSNPLG
301: TAVPRADLEM IVDFVAAKGV HLVSDEIYSG TAFSEPGFVS VLEVLAARAP LAADYALDDR VHVVYSLSKD LGLPGFRVGA IYSSNPDVVS AATKMSSFGL
401: VSSQTQYLLA ALLGDKDFTR RYLAENKRRI KERHDQLVDG LKDIGIACLE SNAGLFCWVN MSHLMHARSF EGEMTLWKKV VFDIGLNISP GSSCHCSEPG
501: WFRVCFANMS AKTLDVAMQR LGEFVQSSSK AAPAALRRAA GPARSMSCPL AMNMKWALRL TPGCADRKAE R

Best Arabidopsis Sequence Match ( AT4G37770.1 )
(BLAST)

001: MGLLSKKASC NTHGQDSSYF WGWEEYEKNP YDEIKNPDGI IQMGLAENQL SFDLIESWLA KNPDAANFQR EGQSIFRELA LFQDYHGLPS FKNAMADFMS
101: ENRGNRVSFN PNKLVLTAGA TPANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGAEI VPIQCKSANG FRITKVALEE AYEQAQKLNL KVKGVLITNP
201: SNPLGTTTTR TELNHLLDFI SRKKIHLISD EIYSGTVFTN PGFISVMEVL KDRKLENTDV FDRVHIVYSL SKDLGLPGFR VGVIYSNDDF VVSAATKMSS
301: FGLISSQTQY LLSALLSDKT FTKNYLEENQ IRLKNRHKKL VSGLEAAGIE CLKSNAGLFC WVDMRHLLKS NTFEAEIELW KKIVYEVKLN ISPGSSCHCN
401: EPGWFRVCFA NLSEETLKVA LDRLKRFVDG PSPTRRSQSE HQRLKNLRKM KVSNWVFRLS FHDREPEER

Arabidopsis Description

ACS81-aminocyclopropane-1-carboxylate synthase-like protein [Source:UniProtKB/TrEMBL;Acc:Q56Y32]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.