Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030199.1-P | Field mustard | cytosol | 88.4 | 88.4 |
| CDY25639 | Canola | cytosol | 87.76 | 87.76 |
| CDX89520 | Canola | cytosol | 87.34 | 87.34 |
| AT4G37770.1 | Thale cress | cytosol | 79.32 | 80.17 |
| Solyc02g063540.1.1 | Tomato | cytosol | 44.94 | 75.0 |
| VIT_00s1437g00010.t01 | Wine grape | cytosol | 73.42 | 74.2 |
| VIT_00s0840g00010.t01 | Wine grape | cytosol | 73.42 | 74.2 |
| AT3G49700.1 | Thale cress | cytosol | 73.42 | 74.04 |
| PGSC0003DMT400008587 | Potato | cytosol | 71.73 | 73.75 |
| AT5G65800.1 | Thale cress | cytosol | 73.0 | 73.62 |
| Solyc02g091990.2.1 | Tomato | cytosol | 72.36 | 73.13 |
| PGSC0003DMT400055203 | Potato | cytosol | 71.94 | 72.71 |
| PGSC0003DMT400008605 | Potato | cytosol | 64.77 | 72.58 |
| KRH77167 | Soybean | cytosol | 70.25 | 70.85 |
| KRH28319 | Soybean | cytosol | 70.04 | 70.49 |
| Solyc03g043890.2.1 | Tomato | cytosol | 70.04 | 70.49 |
| KRH04373 | Soybean | cytosol | 70.46 | 70.32 |
| KRH58165 | Soybean | cytosol | 70.04 | 69.17 |
| GSMUA_Achr1P14280_001 | Banana | nucleus | 66.46 | 68.93 |
| GSMUA_Achr2P08600_001 | Banana | cytosol | 67.09 | 68.68 |
| GSMUA_Achr3P25830_001 | Banana | mitochondrion | 64.56 | 68.15 |
| PGSC0003DMT400013977 | Potato | cytosol | 53.59 | 68.1 |
| GSMUA_Achr4P01340_001 | Banana | mitochondrion | 65.4 | 67.1 |
| GSMUA_Achr5P08880_001 | Banana | cytosol | 65.19 | 66.31 |
| GSMUA_Achr1P04420_001 | Banana | cytosol | 63.29 | 64.94 |
| AT4G08040.1 | Thale cress | cytosol | 62.24 | 64.13 |
| Zm00001d033862_P001 | Maize | cytosol | 63.5 | 62.06 |
| TraesCS4A01G256500.1 | Wheat | cytosol | 62.24 | 60.82 |
| TraesCS4B01G058200.1 | Wheat | cytosol | 61.81 | 60.41 |
| TraesCS4D01G058200.1 | Wheat | cytosol | 61.81 | 60.41 |
| Os03t0727600-01 | Rice | cytosol | 62.03 | 60.37 |
| EER90948 | Sorghum | cytosol | 63.08 | 60.16 |
| AT4G26200.1 | Thale cress | cytosol | 52.95 | 56.15 |
| HORVU4Hr1G009800.5 | Barley | cytosol, plastid | 61.6 | 51.14 |
| AT3G61510.1 | Thale cress | cytosol | 50.63 | 49.18 |
| AT1G01480.1 | Thale cress | cytosol | 50.42 | 48.19 |
| AT4G11280.1 | Thale cress | cytosol | 49.37 | 47.27 |
| AT5G51690.1 | Thale cress | golgi, mitochondrion | 40.08 | 38.38 |
| AT1G62960.1 | Thale cress | plastid | 37.34 | 31.78 |
| AT1G17290.1 | Thale cress | mitochondrion | 20.46 | 17.86 |
| AT1G70580.1 | Thale cress | cytosol, nucleus, peroxisome | 17.72 | 17.46 |
| AT1G23310.1 | Thale cress | cytosol | 17.72 | 17.46 |
| AT1G72330.3 | Thale cress | mitochondrion | 20.25 | 17.36 |
Protein Annotations
| MapMan:11.5.1.1 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | EntrezGene:816812 | ProteinID:AAA85039.1 | ProteinID:AAC32428.1 |
| ProteinID:AAM15065.1 | Symbol:ACS4 | ProteinID:AEC07360.1 | EMBL:AF332404 | ArrayExpress:AT2G22810 | EnsemblPlantsGene:AT2G22810 |
| RefSeq:AT2G22810 | TAIR:AT2G22810 | RefSeq:AT2G22810-TAIR-G | EnsemblPlants:AT2G22810.1 | TAIR:AT2G22810.1 | InterPro:Aminotransferase_I/II |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009693 | GO:GO:0009835 | GO:GO:0009987 |
| GO:GO:0016829 | GO:GO:0016847 | GO:GO:0030170 | GO:GO:0042218 | GO:GO:0042802 | GO:GO:0071281 |
| InterPro:IPR015421 | InterPro:IPR015422 | InterPro:NHTrfase_class1_PyrdxlP-BS | RefSeq:NP_179866.1 | PFAM:PF00155 | PO:PO:0000013 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0020138 | PRINTS:PR00753 | ScanProsite:PS00105 | PANTHER:PTHR43795 |
| PANTHER:PTHR43795:SF10 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | UniProt:Q43309 | SUPFAM:SSF53383 |
| EMBL:U23481 | UniParc:UPI00000A2FC8 | SEG:seg | : | : | : |
Description
ACS41-aminocyclopropane-1-carboxylate synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q43309]
Coordinates
chr2:-:9717602..9719594
Molecular Weight (calculated)
53798.3 Da
IEP (calculated)
8.328
GRAVY (calculated)
-0.351
Length
474 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQLSRKATC NSHGQVSSYF LGWEEYEKNP YDVTKNPQGI IQMGLAENQL CFDLLESWLA QNTDAACFKR DGQSVFRELA LFQDYHGLSS FKNAFADFMS
101: ENRGNRVSFD SNNLVLTAGA TSANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGVEI VPIQSSSTNG FRITKLALEE AYEQAKKLDL NVKGILITNP
201: SNPLGTTTTQ TELNILFDFI TKNKNIHLVS DEIYSGTVFN SSEFISVMEI LKNNQLENTD VLNRVHIVCS LSKDLGLPGF RVGAIYSNDK DVISAATKMS
301: SFGLVSSQTQ YLLSSLLSDK KFTKNYLREN QKRLKNRQRK LVLGLEAIGI KCLKSNAGLF CWVDMRPLLR SKTFEAEMDL WKKIVYEVKL NISPGSSCHC
401: EEPGWFRVCF ANMIDETLKL ALKRLKMLVD DENSSRRCQK SKSERLNGSR KKTMSNVSNW VFRLSFHDRE AEER
101: ENRGNRVSFD SNNLVLTAGA TSANETLMFC LADPGDAFLL PTPYYPGFDR DLKWRTGVEI VPIQSSSTNG FRITKLALEE AYEQAKKLDL NVKGILITNP
201: SNPLGTTTTQ TELNILFDFI TKNKNIHLVS DEIYSGTVFN SSEFISVMEI LKNNQLENTD VLNRVHIVCS LSKDLGLPGF RVGAIYSNDK DVISAATKMS
301: SFGLVSSQTQ YLLSSLLSDK KFTKNYLREN QKRLKNRQRK LVLGLEAIGI KCLKSNAGLF CWVDMRPLLR SKTFEAEMDL WKKIVYEVKL NISPGSSCHC
401: EEPGWFRVCF ANMIDETLKL ALKRLKMLVD DENSSRRCQK SKSERLNGSR KKTMSNVSNW VFRLSFHDRE AEER
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.