Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15174 | Canola | cytosol | 86.69 | 86.69 |
| Bra033261.1-P | Field mustard | cytosol | 86.69 | 86.17 |
| CDX90035 | Canola | cytosol | 77.42 | 85.91 |
| VIT_15s0046g02220.t01 | Wine grape | cytosol | 58.67 | 66.44 |
| AT3G61510.1 | Thale cress | cytosol | 65.12 | 66.19 |
| KRH06585 | Soybean | cytosol | 61.49 | 64.35 |
| KRH00855 | Soybean | cytosol | 62.1 | 64.17 |
| KRH48058 | Soybean | cytosol | 61.09 | 63.92 |
| KRH65284 | Soybean | cytosol | 15.73 | 63.41 |
| KRH40379 | Soybean | cytosol | 61.49 | 62.89 |
| GSMUA_AchrUn_... | Banana | cytosol | 55.04 | 61.63 |
| GSMUA_Achr4P24930_001 | Banana | cytosol | 59.07 | 60.91 |
| GSMUA_Achr4P29150_001 | Banana | cytosol | 59.68 | 60.91 |
| AT4G11280.1 | Thale cress | cytosol | 59.27 | 59.39 |
| EES12700 | Sorghum | cytosol | 57.86 | 58.45 |
| Zm00001d002592_P002 | Maize | cytosol | 56.45 | 57.73 |
| TraesCS2A01G396400.1 | Wheat | cytosol | 56.05 | 57.2 |
| TraesCS2B01G414800.1 | Wheat | cytosol | 56.05 | 57.2 |
| Os04t0578000-01 | Rice | cytosol | 55.65 | 57.14 |
| TraesCS2D01G394200.1 | Wheat | cytosol | 55.85 | 57.0 |
| Zm00001d026060_P003 | Maize | cytosol | 55.85 | 54.31 |
| AT4G37770.1 | Thale cress | cytosol | 50.2 | 53.09 |
| AT3G49700.1 | Thale cress | cytosol | 50.0 | 52.77 |
| AT4G26200.1 | Thale cress | cytosol | 46.98 | 52.13 |
| AT4G08040.1 | Thale cress | cytosol | 47.78 | 51.52 |
| AT5G65800.1 | Thale cress | cytosol | 48.19 | 50.85 |
| AT2G22810.1 | Thale cress | cytosol | 48.19 | 50.42 |
| HORVU2Hr1G094230.2 | Barley | cytosol | 45.56 | 46.69 |
| AT5G51690.1 | Thale cress | golgi, mitochondrion | 35.89 | 35.96 |
| AT1G62960.1 | Thale cress | plastid | 35.08 | 31.24 |
| AT1G70580.1 | Thale cress | cytosol, nucleus, peroxisome | 17.74 | 18.3 |
| AT1G23310.1 | Thale cress | cytosol | 17.14 | 17.67 |
| AT1G17290.1 | Thale cress | mitochondrion | 19.15 | 17.5 |
| AT1G72330.3 | Thale cress | mitochondrion | 18.75 | 16.82 |
Protein Annotations
| MapMan:11.5.1.1 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | EntrezGene:837082 | UniProt:A0A178WMN2 | ProteinID:AAA97516.1 |
| ProteinID:AAF81308.1 | Symbol:ACS2 | ProteinID:AEE27293.1 | ProteinID:AEE27294.1 | EMBL:AF334719 | ArrayExpress:AT1G01480 |
| EnsemblPlantsGene:AT1G01480 | RefSeq:AT1G01480 | TAIR:AT1G01480 | RefSeq:AT1G01480-TAIR-G | EnsemblPlants:AT1G01480.1 | TAIR:AT1G01480.1 |
| EMBL:AY052207 | EMBL:AY143877 | InterPro:Aminotransferase_I/II | Unigene:At.164 | ProteinID:CAA73310.1 | ProteinID:CAA78260.1 |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009693 | GO:GO:0009835 | GO:GO:0009987 |
| GO:GO:0016829 | GO:GO:0016847 | GO:GO:0030170 | GO:GO:0042218 | InterPro:IPR015421 | InterPro:IPR015422 |
| EMBL:M95595 | InterPro:NHTrfase_class1_PyrdxlP-BS | RefSeq:NP_171655.1 | RefSeq:NP_849572.1 | ProteinID:OAP19539.1 | PFAM:PF00155 |
| PO:PO:0000293 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009047 | PO:PO:0025281 | PRINTS:PR00753 | ScanProsite:PS00105 | PANTHER:PTHR43795 |
| PANTHER:PTHR43795:SF25 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | UniProt:Q06402 | SUPFAM:SSF53383 |
| UniParc:UPI00000016DD | : | : | : | : | : |
Description
ACS21-aminocyclopropane-1-carboxylate synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q06402]
Coordinates
chr1:+:175706..178406
Molecular Weight (calculated)
55534.6 Da
IEP (calculated)
7.584
GRAVY (calculated)
-0.201
Length
496 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLPGKNKGA VLSKIATNNQ HGENSEYFDG WKAYDKDPFH LSRNPHGIIQ MGLAENQLCL DLIKDWVKEN PEASICTLEG IHQFSDIANF QDYHGLKKFR
101: QAIAHFMGKA RGGRVTFDPE RVVMSGGATG ANETIMFCLA DPGDVFLIPS PYYAAFDRDL RWRTGVEIIP VPCSSSDNFK LTVDAAEWAY KKAQESNKKV
201: KGLILTNPSN PLGTMLDKDT LTNLVRFVTR KNIHLVVDEI YAATVFAGGD FVSVAEVVND VDISEVNVDL IHIVYSLSKD MGLPGFRVGI VYSFNDSVVS
301: CARKMSSFGL VSSQTQLMLA SMLSDDQFVD NFLMESSRRL GIRHKVFTTG IKKADIACLT SNAGLFAWMD LRHLLRDRNS FESEIELWHI IIDRVKLNVS
401: PGSSFRCTEP GWFRICFANM DDDTLHVALG RIQDFVSKNK NKIVEKASEN DQVIQNKSAK KLKWTQTNLR LSFRRLYEDG LSSPGIMSPH SPLLRA
101: QAIAHFMGKA RGGRVTFDPE RVVMSGGATG ANETIMFCLA DPGDVFLIPS PYYAAFDRDL RWRTGVEIIP VPCSSSDNFK LTVDAAEWAY KKAQESNKKV
201: KGLILTNPSN PLGTMLDKDT LTNLVRFVTR KNIHLVVDEI YAATVFAGGD FVSVAEVVND VDISEVNVDL IHIVYSLSKD MGLPGFRVGI VYSFNDSVVS
301: CARKMSSFGL VSSQTQLMLA SMLSDDQFVD NFLMESSRRL GIRHKVFTTG IKKADIACLT SNAGLFAWMD LRHLLRDRNS FESEIELWHI IIDRVKLNVS
401: PGSSFRCTEP GWFRICFANM DDDTLHVALG RIQDFVSKNK NKIVEKASEN DQVIQNKSAK KLKWTQTNLR LSFRRLYEDG LSSPGIMSPH SPLLRA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.