Factsheet for Bra033261.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010441.1-P
Bra013945.1-P
Bra019121.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01480.1	Bra010441.1-P	AT4G26080.1	19705149
AT1G01480.1	Bra013945.1-P	AT4G26080.1	19705149
AT1G01480.1	Bra019121.1-P	AT4G26080.1	19705149

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90035	Canola	cytosol	88.18	98.43
AT1G01480.1	Thale cress	cytosol	86.17	86.69
KRH65284	Soybean	cytosol	16.63	67.48
VIT_15s0046g02220.t01	Wine grape	cytosol	58.72	66.89
Bra007611.1-P	Field mustard	cytosol	63.13	66.6
KRH00855	Soybean	cytosol	62.93	65.42
KRH06585	Soybean	cytosol	61.72	64.98
KRH48058	Soybean	cytosol	61.12	64.35
KRH40379	Soybean	cytosol	62.53	64.33
GSMUA_Achr4P29150_001	Banana	cytosol	59.92	61.52
GSMUA_AchrUn_...	Banana	cytosol	53.91	60.72
GSMUA_Achr4P24930_001	Banana	cytosol	58.52	60.71
Bra035236.1-P	Field mustard	cytosol	58.72	60.04
EES12700	Sorghum	cytosol	57.92	58.86
TraesCS2A01G396400.1	Wheat	cytosol	56.71	58.23
TraesCS2B01G414800.1	Wheat	cytosol	56.71	58.23
TraesCS2D01G394200.1	Wheat	cytosol	56.51	58.02
Os04t0578000-01	Rice	cytosol	56.11	57.97
Zm00001d002592_P002	Maize	cytosol	56.31	57.94
Zm00001d026060_P003	Maize	cytosol	55.71	54.51
Bra010611.1-P	Field mustard	cytosol	50.9	54.16
Bra019117.1-P	Field mustard	cytosol	48.7	53.88
Bra026456.1-P	Field mustard	cytosol	48.3	53.79
Bra011784.1-P	Field mustard	cytosol	49.9	53.09
Bra017962.1-P	Field mustard	cytosol	49.3	52.34
Bra012924.1-P	Field mustard	cytosol	49.3	52.34
Bra000637.1-P	Field mustard	cytosol	48.3	51.94
Bra037829.1-P	Field mustard	cytosol	45.49	51.71
Bra031846.1-P	Field mustard	cytosol	48.7	51.7
Bra024420.1-P	Field mustard	cytosol	48.7	51.7
Bra030199.1-P	Field mustard	cytosol	48.9	51.48
HORVU2Hr1G094230.2	Barley	cytosol	46.09	47.52
Bra022560.1-P	Field mustard	mitochondrion, plastid	36.07	36.0
Bra027008.1-P	Field mustard	cytosol	33.07	30.39
Bra016353.1-P	Field mustard	cytosol	18.04	18.83
Bra012371.1-P	Field mustard	cytosol	17.03	18.64
Bra024580.1-P	Field mustard	cytosol	17.84	18.62
Bra016202.1-P	Field mustard	cytosol	17.64	18.26
Bra016607.1-P	Field mustard	mitochondrion	18.04	16.61
Bra025984.1-P	Field mustard	cytosol, mitochondrion	17.84	16.57
Bra026675.1-P	Field mustard	mitochondrion	17.84	16.24
Bra009959.1-P	Field mustard	cytosol, peroxisome, plasma membrane	9.42	13.66

Protein Annotations

MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	EnsemblPlantsGene:Bra033261	EnsemblPlants:Bra033261.1
EnsemblPlants:Bra033261.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016847	GO:GO:0030170	GO:GO:0042218	InterPro:IPR015421
InterPro:IPR015422	UniProt:M4EWS6	InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105
PANTHER:PTHR43795	PANTHER:PTHR43795:SF25	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383
UniParc:UPI000254515B	:	:	:	:	:

Description

AT1G01480 (E=4e-257) ACS2, AT-ACC2 | ACS2; 1-aminocyclopropane-1-carboxylate synthase

Coordinates

chrA10:+:4623797..4626355

Molecular Weight (calculated)

55792.6 Da

IEP (calculated)

7.119

GRAVY (calculated)

-0.192

Length

499 amino acids

Sequence
(BLAST)

001: MGSLIKSGGV SGAILSRIAT NDQHGENSEY FDGWKAYDKD PFHLSRNPHG IIQMGLAENQ LCLDLIKDWI KENPKASVCT PEGVYQFSDI ANFQDYHGLN
101: EFRQAIANFM GKARGGRVTF DPERIVMSGG ATGANETIMF CLADPGDVFL VPSPYYAAFD RDLRWRTGVE IVPVHCSSSN NFKLTVEAVE WAYKKAVQSN
201: KNVKGLLFTN PSNPLGTILD KDTLKNLVRF VTRNNIHLVV DEIYAATVFA GENFASVAEV VKDLDSSEVN VDLIHIVYSL SKDMGLPGFR VGIVYSYNDS
301: VVSCARKMSS FGLVSSQTQF MLASMLSDDS FVDNFLMESS KRLGIRHGVF TLGLKKADIN CLISTAGLFV WMDLRHLLRV RNSFESEIEL WHIIIDKVKL
401: NVSPGSSFQC TEPGWFRVCF ANMDDDTLHV ALRRIQDFVS KNSNKTAEKA SDNDQLIQSN NAKKQKWKQS NLRLSFRRLY EDGLSSPGIM SPHSPLLRT

Best Arabidopsis Sequence Match ( AT1G01480.1 )
(BLAST)

001: MGLPGKNKGA VLSKIATNNQ HGENSEYFDG WKAYDKDPFH LSRNPHGIIQ MGLAENQLCL DLIKDWVKEN PEASICTLEG IHQFSDIANF QDYHGLKKFR
101: QAIAHFMGKA RGGRVTFDPE RVVMSGGATG ANETIMFCLA DPGDVFLIPS PYYAAFDRDL RWRTGVEIIP VPCSSSDNFK LTVDAAEWAY KKAQESNKKV
201: KGLILTNPSN PLGTMLDKDT LTNLVRFVTR KNIHLVVDEI YAATVFAGGD FVSVAEVVND VDISEVNVDL IHIVYSLSKD MGLPGFRVGI VYSFNDSVVS
301: CARKMSSFGL VSSQTQLMLA SMLSDDQFVD NFLMESSRRL GIRHKVFTTG IKKADIACLT SNAGLFAWMD LRHLLRDRNS FESEIELWHI IIDRVKLNVS
401: PGSSFRCTEP GWFRICFANM DDDTLHVALG RIQDFVSKNK NKIVEKASEN DQVIQNKSAK KLKWTQTNLR LSFRRLYEDG LSSPGIMSPH SPLLRA

Arabidopsis Description

ACS21-aminocyclopropane-1-carboxylate synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q06402]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.