Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033261.1-P | Field mustard | cytosol | 98.43 | 88.18 |
| CDY15174 | Canola | cytosol | 95.75 | 86.29 |
| AT1G01480.1 | Thale cress | cytosol | 85.91 | 77.42 |
| KRH65284 | Soybean | cytosol | 18.57 | 67.48 |
| VIT_15s0046g02220.t01 | Wine grape | cytosol | 63.98 | 65.3 |
| CDY11360 | Canola | cytosol | 63.98 | 60.47 |
| CDY65356 | Canola | cytosol | 63.09 | 59.62 |
| KRH00855 | Soybean | cytosol | 62.19 | 57.92 |
| KRH48058 | Soybean | cytosol | 61.3 | 57.81 |
| KRH06585 | Soybean | cytosol | 61.07 | 57.59 |
| KRH40379 | Soybean | cytosol | 61.74 | 56.91 |
| CDY13251 | Canola | cytosol | 59.73 | 54.38 |
| CDX86796 | Canola | cytosol | 59.06 | 54.1 |
| GSMUA_Achr4P29150_001 | Banana | cytosol | 58.61 | 53.91 |
| GSMUA_Achr4P24930_001 | Banana | cytosol | 57.49 | 53.43 |
| GSMUA_AchrUn_... | Banana | cytosol | 51.9 | 52.37 |
| EES12700 | Sorghum | cytosol | 57.49 | 52.34 |
| Os04t0578000-01 | Rice | cytosol | 56.15 | 51.97 |
| TraesCS2B01G414800.1 | Wheat | cytosol | 56.15 | 51.65 |
| TraesCS2A01G396400.1 | Wheat | cytosol | 56.15 | 51.65 |
| TraesCS2D01G394200.1 | Wheat | cytosol | 55.93 | 51.44 |
| Zm00001d002592_P002 | Maize | cytosol | 55.7 | 51.34 |
| CDY66472 | Canola | cytosol | 44.97 | 49.88 |
| CDX75675 | Canola | cytosol | 49.66 | 49.22 |
| Zm00001d026060_P003 | Maize | cytosol | 55.26 | 48.43 |
| CDY69462 | Canola | cytosol | 50.56 | 48.19 |
| CDX69326 | Canola | cytosol | 49.89 | 47.55 |
| CDX94359 | Canola | cytosol | 47.43 | 47.32 |
| CDY71142 | Canola | cytosol | 47.43 | 47.32 |
| CDY05953 | Canola | cytosol | 49.66 | 47.23 |
| CDY08163 | Canola | cytosol | 49.66 | 47.23 |
| CDX89355 | Canola | cytosol | 47.2 | 47.1 |
| CDY02111 | Canola | cytosol | 49.44 | 47.02 |
| CDY42751 | Canola | cytosol | 47.43 | 47.01 |
| CDY23035 | Canola | cytosol | 48.99 | 47.0 |
| CDY34015 | Canola | cytosol | 48.77 | 46.98 |
| CDX83146 | Canola | cytosol | 48.55 | 46.77 |
| CDX81296 | Canola | cytosol | 45.64 | 46.47 |
| CDY18674 | Canola | cytosol | 45.41 | 46.24 |
| CDY25639 | Canola | cytosol | 48.32 | 45.57 |
| CDX89520 | Canola | cytosol | 47.65 | 44.94 |
| CDX92755 | Canola | cytosol | 41.61 | 44.71 |
| HORVU2Hr1G094230.2 | Barley | cytosol | 43.85 | 40.5 |
| CDY72652 | Canola | cytosol | 17.67 | 39.3 |
| CDY46931 | Canola | mitochondrion, plastid | 36.47 | 32.6 |
| CDX91604 | Canola | mitochondrion, plastid | 35.79 | 32.0 |
| CDY45474 | Canola | cytosol | 32.21 | 27.53 |
| CDY45965 | Canola | cytosol | 32.89 | 27.07 |
| CDY43579 | Canola | cytosol, mitochondrion, plastid | 9.4 | 21.88 |
| CDX91708 | Canola | peroxisome | 18.12 | 20.1 |
| CDY25780 | Canola | peroxisome | 18.12 | 20.1 |
| CDX68271 | Canola | mitochondrion | 5.15 | 17.97 |
| CDX86159 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 5.15 | 17.56 |
| CDX88411 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 5.15 | 17.56 |
| CDX91589 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 5.15 | 17.56 |
| CDY41452 | Canola | peroxisome | 18.34 | 17.15 |
| CDY04729 | Canola | cytosol | 18.12 | 16.95 |
| CDY44130 | Canola | cytosol | 18.12 | 16.95 |
| CDY66294 | Canola | cytosol | 17.9 | 16.63 |
| CDY61225 | Canola | peroxisome | 17.67 | 16.42 |
| CDY50645 | Canola | cytosol | 7.61 | 15.74 |
| CDY26256 | Canola | mitochondrion | 18.12 | 15.08 |
| CDX83914 | Canola | mitochondrion | 18.12 | 14.97 |
| CDX96776 | Canola | mitochondrion | 18.12 | 14.94 |
| CDX83913 | Canola | cytosol, nucleus, peroxisome | 4.25 | 14.84 |
| CDY48485 | Canola | plastid | 17.9 | 14.81 |
| CDY21752 | Canola | mitochondrion | 18.12 | 14.81 |
| CDX81815 | Canola | mitochondrion | 18.12 | 14.75 |
| CDY12474 | Canola | peroxisome, plastid | 17.67 | 14.71 |
| CDY03822 | Canola | cytosol | 4.03 | 13.95 |
| CDX86161 | Canola | cytosol | 3.13 | 10.61 |
| CDX68272 | Canola | nucleus | 2.01 | 8.11 |
| CDY25781 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:11.5.1.1 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | GO:A0A078DLI2 | InterPro:Aminotransferase_I/II | EnsemblPlants:CDX90035 |
| ProteinID:CDX90035 | ProteinID:CDX90035.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0016847 | GO:GO:0030170 |
| GO:GO:0042218 | EnsemblPlantsGene:GSBRNA2T00150537001 | InterPro:IPR015421 | InterPro:IPR015422 | InterPro:NHTrfase_class1_PyrdxlP-BS | PFAM:PF00155 |
| PRINTS:PR00753 | ScanProsite:PS00105 | PANTHER:PTHR43795 | PANTHER:PTHR43795:SF25 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 |
| InterPro:PyrdxlP-dep_Trfase_major | SUPFAM:SSF53383 | UniParc:UPI0004EE9E64 | SEG:seg | : | : |
Description
BnaA10g00470D
Coordinates
chrLK031861:+:1352480..1354834
Molecular Weight (calculated)
50218.3 Da
IEP (calculated)
8.381
GRAVY (calculated)
-0.132
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: MHFNLKLKLC LDLIKDWIKE NPKASVCTPE GVYQFSDIAN FQDYHGLKEF RQAIANFMGK ARGGRVTFDP ERIVMSGGAT GANETIMFCL ADPGDVFLVP
101: SPYYAAFDRD LRWRTGVEIV PVHCSSSNNF KLTVEAVEWA YKKAVQSNKN VKGLLFTNPS NPLGTILDKD TLKNLVRFVT RNNIHLVVDE IYAATVFAGE
201: NFASVAEVVK DLDSSEVNVD LIHIVYSLSK DMGLPGFRVG IVYSYNDSVV SCARKMSSFG LVSSQTQFML ASMLSDDSFV DNFLMESSKR LGIRHGVFTL
301: GLKKAGINCL ISTAGLFVWM DLRHLLRVRN SFESEIELWH IIIDKVKLNV SPGSSFQCTE PGWFRVCFAN MDDDTLHVAL RRIQDFVSKN SNKTAEKASD
401: NDQLIQSNNA KKQKWKQSNL RLSFRRLYED GLSSPGIMSP HSPLLRT
101: SPYYAAFDRD LRWRTGVEIV PVHCSSSNNF KLTVEAVEWA YKKAVQSNKN VKGLLFTNPS NPLGTILDKD TLKNLVRFVT RNNIHLVVDE IYAATVFAGE
201: NFASVAEVVK DLDSSEVNVD LIHIVYSLSK DMGLPGFRVG IVYSYNDSVV SCARKMSSFG LVSSQTQFML ASMLSDDSFV DNFLMESSKR LGIRHGVFTL
301: GLKKAGINCL ISTAGLFVWM DLRHLLRVRN SFESEIELWH IIIDKVKLNV SPGSSFQCTE PGWFRVCFAN MDDDTLHVAL RRIQDFVSKN SNKTAEKASD
401: NDQLIQSNNA KKQKWKQSNL RLSFRRLYED GLSSPGIMSP HSPLLRT
001: MGLPGKNKGA VLSKIATNNQ HGENSEYFDG WKAYDKDPFH LSRNPHGIIQ MGLAENQLCL DLIKDWVKEN PEASICTLEG IHQFSDIANF QDYHGLKKFR
101: QAIAHFMGKA RGGRVTFDPE RVVMSGGATG ANETIMFCLA DPGDVFLIPS PYYAAFDRDL RWRTGVEIIP VPCSSSDNFK LTVDAAEWAY KKAQESNKKV
201: KGLILTNPSN PLGTMLDKDT LTNLVRFVTR KNIHLVVDEI YAATVFAGGD FVSVAEVVND VDISEVNVDL IHIVYSLSKD MGLPGFRVGI VYSFNDSVVS
301: CARKMSSFGL VSSQTQLMLA SMLSDDQFVD NFLMESSRRL GIRHKVFTTG IKKADIACLT SNAGLFAWMD LRHLLRDRNS FESEIELWHI IIDRVKLNVS
401: PGSSFRCTEP GWFRICFANM DDDTLHVALG RIQDFVSKNK NKIVEKASEN DQVIQNKSAK KLKWTQTNLR LSFRRLYEDG LSSPGIMSPH SPLLRA
101: QAIAHFMGKA RGGRVTFDPE RVVMSGGATG ANETIMFCLA DPGDVFLIPS PYYAAFDRDL RWRTGVEIIP VPCSSSDNFK LTVDAAEWAY KKAQESNKKV
201: KGLILTNPSN PLGTMLDKDT LTNLVRFVTR KNIHLVVDEI YAATVFAGGD FVSVAEVVND VDISEVNVDL IHIVYSLSKD MGLPGFRVGI VYSFNDSVVS
301: CARKMSSFGL VSSQTQLMLA SMLSDDQFVD NFLMESSRRL GIRHKVFTTG IKKADIACLT SNAGLFAWMD LRHLLRDRNS FESEIELWHI IIDRVKLNVS
401: PGSSFRCTEP GWFRICFANM DDDTLHVALG RIQDFVSKNK NKIVEKASEN DQVIQNKSAK KLKWTQTNLR LSFRRLYEDG LSSPGIMSPH SPLLRA
Arabidopsis Description
ACS21-aminocyclopropane-1-carboxylate synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q06402]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.