Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G61510.1 | CDY11360 | AT3G61510.1 | 14983000 |
| AT3G61510.1 | CDY65356 | AT3G61510.1 | 14983000 |
| AT3G61510.1 | CDX86796 | AT4G11280.1 | 14983000 |
| AT3G61510.1 | CDY13251 | AT4G11280.1 | 14983000 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11360 | Canola | cytosol | 97.25 | 97.25 |
| AT3G61510.1 | Thale cress | cytosol | 87.31 | 84.63 |
| PGSC0003DMT400000553 | Potato | cytosol | 65.33 | 63.58 |
| CDY15174 | Canola | cytosol | 66.6 | 63.51 |
| Solyc01g095080.2.1 | Tomato | cytosol | 64.9 | 63.3 |
| CDX90035 | Canola | cytosol | 59.62 | 63.09 |
| GSMUA_Achr4P24930_001 | Banana | cytosol | 60.25 | 59.25 |
| GSMUA_AchrUn_... | Banana | cytosol | 54.55 | 58.24 |
| GSMUA_Achr4P29150_001 | Banana | cytosol | 59.83 | 58.23 |
| Solyc05g050010.2.1 | Tomato | cytosol | 58.35 | 57.98 |
| CDY13251 | Canola | cytosol | 60.04 | 57.84 |
| CDX86796 | Canola | cytosol | 59.41 | 57.58 |
| Os04t0578000-01 | Rice | cytosol | 58.56 | 57.35 |
| TraesCS2B01G414800.1 | Wheat | cytosol | 58.77 | 57.2 |
| TraesCS2A01G396400.1 | Wheat | cytosol | 58.56 | 57.0 |
| TraesCS2D01G394200.1 | Wheat | cytosol | 58.56 | 57.0 |
| CDY72652 | Canola | cytosol | 24.1 | 56.72 |
| EES12700 | Sorghum | cytosol | 58.35 | 56.21 |
| Zm00001d002592_P002 | Maize | cytosol | 57.08 | 55.67 |
| PGSC0003DMT400084228 | Potato | cytosol | 20.51 | 55.43 |
| CDY66472 | Canola | cytosol | 46.72 | 54.84 |
| CDY42751 | Canola | cytosol | 51.16 | 53.66 |
| CDX75675 | Canola | cytosol | 51.16 | 53.66 |
| CDX89355 | Canola | cytosol | 50.74 | 53.57 |
| CDX94359 | Canola | cytosol | 50.53 | 53.35 |
| CDY71142 | Canola | cytosol | 50.53 | 53.35 |
| Zm00001d026060_P003 | Maize | cytosol | 57.08 | 52.94 |
| CDX69326 | Canola | cytosol | 51.59 | 52.03 |
| CDY69462 | Canola | cytosol | 51.37 | 51.81 |
| CDX92755 | Canola | cytosol | 45.45 | 51.68 |
| CDX81296 | Canola | cytosol | 47.15 | 50.8 |
| PGSC0003DMT400055753 | Potato | vacuole | 40.8 | 50.79 |
| CDY18674 | Canola | cytosol | 46.93 | 50.57 |
| CDY23035 | Canola | cytosol | 49.47 | 50.21 |
| CDY02111 | Canola | cytosol | 49.68 | 50.0 |
| CDY05953 | Canola | cytosol | 49.47 | 49.79 |
| CDY08163 | Canola | cytosol | 49.47 | 49.79 |
| CDY25639 | Canola | cytosol | 49.68 | 49.58 |
| CDX83146 | Canola | cytosol | 48.2 | 49.14 |
| CDX89520 | Canola | cytosol | 48.84 | 48.73 |
| CDY34015 | Canola | cytosol | 47.78 | 48.71 |
| HORVU2Hr1G094230.2 | Barley | cytosol | 46.72 | 45.66 |
| CDY46931 | Canola | mitochondrion, plastid | 35.94 | 34.0 |
| CDX91604 | Canola | mitochondrion, plastid | 35.52 | 33.6 |
| CDY45474 | Canola | cytosol | 32.98 | 29.83 |
| CDY45965 | Canola | cytosol | 33.19 | 28.91 |
| CDY43579 | Canola | cytosol, mitochondrion, plastid | 10.78 | 26.56 |
| CDY25780 | Canola | peroxisome | 17.34 | 20.35 |
| CDX91708 | Canola | peroxisome | 17.34 | 20.35 |
| CDY66294 | Canola | cytosol | 19.45 | 19.13 |
| CDX86159 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 5.29 | 19.08 |
| CDX88411 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 5.29 | 19.08 |
| CDX91589 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 5.29 | 19.08 |
| CDY04729 | Canola | cytosol | 19.24 | 19.04 |
| CDY44130 | Canola | cytosol | 19.24 | 19.04 |
| CDY50645 | Canola | cytosol | 8.67 | 18.98 |
| CDY61225 | Canola | peroxisome | 19.24 | 18.92 |
| CDY41452 | Canola | peroxisome | 19.03 | 18.83 |
| CDX68271 | Canola | mitochondrion | 4.65 | 17.19 |
| CDX83914 | Canola | mitochondrion | 19.45 | 17.01 |
| CDY26256 | Canola | mitochondrion | 19.24 | 16.95 |
| CDY48485 | Canola | plastid | 19.24 | 16.85 |
| CDY21752 | Canola | mitochondrion | 19.45 | 16.82 |
| CDX96776 | Canola | mitochondrion | 19.24 | 16.79 |
| CDX81815 | Canola | mitochondrion | 19.45 | 16.76 |
| CDY12474 | Canola | peroxisome, plastid | 18.18 | 16.01 |
| CDY25781 | Canola | cytosol | 1.9 | 15.52 |
| CDX83913 | Canola | cytosol, nucleus, peroxisome | 4.02 | 14.84 |
| CDY03822 | Canola | cytosol | 4.02 | 14.73 |
| CDX68272 | Canola | nucleus | 3.17 | 13.51 |
| CDX86161 | Canola | cytosol | 2.75 | 9.85 |
Protein Annotations
| MapMan:11.5.1.1 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | GO:A0A078JI04 | UniProt:A0A078JI04 | InterPro:Aminotransferase_I/II |
| EnsemblPlants:CDY65356 | ProteinID:CDY65356 | ProteinID:CDY65356.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0030170 | EnsemblPlantsGene:GSBRNA2T00045684001 | InterPro:IPR015421 |
| InterPro:IPR015422 | InterPro:NHTrfase_class1_PyrdxlP-BS | PFAM:PF00155 | PRINTS:PR00753 | ScanProsite:PS00105 | PANTHER:PTHR43795 |
| PANTHER:PTHR43795:SF25 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | SUPFAM:SSF53383 | UniParc:UPI0004EDC51B |
| SEG:seg | : | : | : | : | : |
Description
BnaC08g49010DBnaC08g49010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JI04]
Coordinates
chrLK034754:-:18383..21239
Molecular Weight (calculated)
53412.2 Da
IEP (calculated)
6.745
GRAVY (calculated)
-0.198
Length
473 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLDKNMLSK LAVGDKHGED SPYFEGWKAY DNNPFHPEHN PQGVIQMGLA ENQLCSDLIK EWIKANPQAS ICTAEGIDGF SDIAVFQDYH GLKQFRQAIA
101: AFMERARGGR VRFEEERVVM SGGATGANET LMFCLADRGD AFLVPTPYYA AFDRDLSWRT GVRIIPVECN SSNNFQVTKQ ALESAYLNAQ ETGIKIKGLI
201: LANPSNPLGT SLDRETLHTL MNFINDKQIH LVCDEIYAAT VFAEPGFISV AEMIQEMDHV NRDLIHIVYS LSKDMGLPGF RVGVVYSYND AVVTCARRMS
301: SFGLVSSQTQ SFLAAMLSDQ IFVDNFLKEV SKRVAKRHLI FTEGLKEMGV SCLTSNAGLF VLMDLRQMLK DQTFESEMSL WRIIINKVKI NISPGSSFHC
401: SESGWFRVCF ANMDEDTLQI ALQRMKHFVL RHRENKKRKS FQENLKLSFS SMTYDEHVRT PTLMSPHSPL VRT
101: AFMERARGGR VRFEEERVVM SGGATGANET LMFCLADRGD AFLVPTPYYA AFDRDLSWRT GVRIIPVECN SSNNFQVTKQ ALESAYLNAQ ETGIKIKGLI
201: LANPSNPLGT SLDRETLHTL MNFINDKQIH LVCDEIYAAT VFAEPGFISV AEMIQEMDHV NRDLIHIVYS LSKDMGLPGF RVGVVYSYND AVVTCARRMS
301: SFGLVSSQTQ SFLAAMLSDQ IFVDNFLKEV SKRVAKRHLI FTEGLKEMGV SCLTSNAGLF VLMDLRQMLK DQTFESEMSL WRIIINKVKI NISPGSSFHC
401: SESGWFRVCF ANMDEDTLQI ALQRMKHFVL RHRENKKRKS FQENLKLSFS SMTYDEHVRT PTLMSPHSPL VRT
001: MSQGACENQL LSKLALSDKH GEASPYFHGW KAYDNNPFHP THNPQGVIQM GLAENQLCSD LIKEWIKENP QASICTAEGI DSFSDIAVFQ DYHGLKQFRQ
101: AIATFMERAR GGRVRFEAER VVMSGGATGA NETIMFCLAD PGDAFLVPTP YYAAFDRDLR WRTGVRIIPV ECSSSNNFQI TKQALESAYL KAQETGIKIK
201: GLIISNPLGT SLDRETLESL VSFINDKQIH LVCDEIYAAT VFAEPGFISV AEIIQEMYYV NRDLIHIVYS LSKDMGLPGF RVGVVYSYND VVVSCARRMS
301: SFGLVSSQTQ SFLAAMLSDQ SFVDNFLVEV SKRVAKRHHM FTEGLEEMGI SCLRSNAGLF VLMDLRHMLK DQTFDSEMAL WRVIINKVKI NVSPGSSFHC
401: SEPGWFRVCF ANMDEDTLQI ALERIKDFVV GDRANKNKNC NCICNNKREN KKRKSFQKNL KLSLSSMRYE EHVRSPKLMS PHSPLLRA
101: AIATFMERAR GGRVRFEAER VVMSGGATGA NETIMFCLAD PGDAFLVPTP YYAAFDRDLR WRTGVRIIPV ECSSSNNFQI TKQALESAYL KAQETGIKIK
201: GLIISNPLGT SLDRETLESL VSFINDKQIH LVCDEIYAAT VFAEPGFISV AEIIQEMYYV NRDLIHIVYS LSKDMGLPGF RVGVVYSYND VVVSCARRMS
301: SFGLVSSQTQ SFLAAMLSDQ SFVDNFLVEV SKRVAKRHHM FTEGLEEMGI SCLRSNAGLF VLMDLRHMLK DQTFDSEMAL WRVIINKVKI NVSPGSSFHC
401: SEPGWFRVCF ANMDEDTLQI ALERIKDFVV GDRANKNKNC NCICNNKREN KKRKSFQKNL KLSLSSMRYE EHVRSPKLMS PHSPLLRA
Arabidopsis Description
ACS11-aminocyclopropane-1-carboxylate synthase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q06429]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.