Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G094230.2 | |
| HORVU4Hr1G009800.5 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G414800.1 | Wheat | cytosol | 71.69 | 71.4 |
| TraesCS2D01G394200.1 | Wheat | cytosol | 71.07 | 70.78 |
| TraesCS2A01G396400.1 | Wheat | cytosol | 70.87 | 70.58 |
| Zm00001d002592_P002 | Maize | cytosol | 63.02 | 62.89 |
| EES12700 | Sorghum | cytosol | 63.43 | 62.53 |
| Os04t0578000-01 | Rice | cytosol | 61.57 | 61.7 |
| Zm00001d026060_P003 | Maize | cytosol | 61.98 | 58.82 |
| KRH65284 | Soybean | cytosol | 14.26 | 56.1 |
| GSMUA_Achr4P29150_001 | Banana | cytosol | 53.31 | 53.09 |
| GSMUA_AchrUn_... | Banana | cytosol | 46.9 | 51.24 |
| GSMUA_Achr4P24930_001 | Banana | cytosol | 49.38 | 49.69 |
| CDX86796 | Canola | cytosol | 50.0 | 49.59 |
| Bra035236.1-P | Field mustard | cytosol | 50.0 | 49.59 |
| CDY13251 | Canola | cytosol | 50.21 | 49.49 |
| KRH00855 | Soybean | cytosol | 48.76 | 49.17 |
| KRH27892 | Soybean | cytosol | 48.55 | 48.96 |
| AT4G11280.1 | Thale cress | cytosol | 49.59 | 48.48 |
| KRH41241 | Soybean | cytosol | 48.14 | 48.14 |
| KRH06585 | Soybean | cytosol | 46.9 | 47.89 |
| KRH48058 | Soybean | cytosol | 46.9 | 47.89 |
| KRH40379 | Soybean | cytosol | 47.93 | 47.84 |
| VIT_02s0025g00360.t01 | Wine grape | cytosol | 47.52 | 47.82 |
| PGSC0003DMT400032096 | Potato | cytosol | 47.73 | 47.73 |
| PGSC0003DMT400031769 | Potato | cytosol | 47.73 | 47.63 |
| KRH59970 | Soybean | cytosol | 47.52 | 47.52 |
| PGSC0003DMT400000553 | Potato | cytosol | 47.52 | 47.33 |
| Solyc08g081540.2.1 | Tomato | cytosol | 47.11 | 47.2 |
| Bra007611.1-P | Field mustard | cytosol | 46.07 | 47.15 |
| CDY11360 | Canola | cytosol | 46.07 | 47.15 |
| Solyc05g050010.2.1 | Tomato | cytosol | 46.28 | 47.06 |
| Solyc01g095080.2.1 | Tomato | cytosol | 47.11 | 47.01 |
| CDY15174 | Canola | cytosol | 47.93 | 46.77 |
| CDY65356 | Canola | cytosol | 45.66 | 46.72 |
| PGSC0003DMT400055753 | Potato | vacuole | 36.57 | 46.58 |
| Solyc08g081550.2.1 | Tomato | cytosol | 45.25 | 46.4 |
| HORVU7Hr1G053970.1 | Barley | mitochondrion | 7.44 | 46.15 |
| Bra033261.1-P | Field mustard | cytosol | 47.52 | 46.09 |
| AT1G01480.1 | Thale cress | cytosol | 46.69 | 45.56 |
| AT3G61510.1 | Thale cress | cytosol | 45.45 | 45.08 |
| VIT_15s0046g02220.t01 | Wine grape | cytosol | 40.29 | 44.52 |
| PGSC0003DMT400014932 | Potato | cytosol | 44.63 | 44.44 |
| Solyc12g056180.1.1 | Tomato | cytosol | 43.39 | 44.4 |
| PGSC0003DMT400012864 | Potato | cytosol | 44.01 | 43.92 |
| CDX90035 | Canola | cytosol | 40.5 | 43.85 |
| HORVU2Hr1G119710.1 | Barley | mitochondrion | 8.47 | 42.27 |
| HORVU3Hr1G098750.1 | Barley | cytosol, peroxisome | 4.75 | 38.98 |
| HORVU3Hr1G019430.6 | Barley | cytosol, mitochondrion | 34.3 | 38.6 |
| HORVU4Hr1G009800.5 | Barley | cytosol, plastid | 40.08 | 33.98 |
| Solyc08g008100.2.1 | Tomato | nucleus | 24.38 | 32.33 |
| PGSC0003DMT400084228 | Potato | cytosol | 10.33 | 28.57 |
| HORVU7Hr1G012940.1 | Barley | cytosol | 31.82 | 25.71 |
| HORVU3Hr1G019410.1 | Barley | endoplasmic reticulum | 11.57 | 24.24 |
| HORVU3Hr1G016440.3 | Barley | cytosol | 15.5 | 24.04 |
| HORVU2Hr1G063740.6 | Barley | peroxisome, vacuole | 15.5 | 15.43 |
| HORVU7Hr1G074250.1 | Barley | cytosol, peroxisome | 2.27 | 14.47 |
| HORVU5Hr1G062990.1 | Barley | cytosol | 14.26 | 13.29 |
| HORVU1Hr1G018540.17 | Barley | cytosol, golgi, plastid | 14.88 | 12.79 |
| HORVU2Hr1G030820.1 | Barley | mitochondrion | 13.84 | 12.03 |
| HORVU5Hr1G014730.8 | Barley | cytosol, plastid, vacuole | 3.93 | 5.99 |
Protein Annotations
| Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | MapMan:50.4.4 | UniProt:A0A287IZP7 | InterPro:Aminotransferase_I/II | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0030170 |
| EnsemblPlantsGene:HORVU2Hr1G094230 | EnsemblPlants:HORVU2Hr1G094230.2 | InterPro:IPR015421 | InterPro:IPR015422 | InterPro:NHTrfase_class1_PyrdxlP-BS | PFAM:PF00155 |
| PRINTS:PR00753 | ScanProsite:PS00105 | PANTHER:PTHR43795 | PANTHER:PTHR43795:SF25 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 |
| InterPro:PyrdxlP-dep_Trfase_major | SUPFAM:SSF53383 | UniParc:UPI000B467021 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr2H:-:663877772..663879984
Molecular Weight (calculated)
44389.7 Da
IEP (calculated)
7.161
GRAVY (calculated)
-0.224
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKSAELLS RMAAGDGHGE NSSYFDGWKA YDKNPFHLQD NPDGVIQMGL AENQLSLDLI EEWSKAHPEA SICTAEGASQ FKRIANFQDY HGLPEFRQAM
101: AQFMGQVRGW KARFDPDRVV MSGGATGAQE TLAFCLANPG EAFLVPTPYY PGFDRDCCWR SGVKLLPIEC HSSNDFKITR EAVVSAYESA RSNGVRVKGI
201: LITNPSNPLG TTADRATLAM LATFATEHRV HLICDEIYAG SVFAKPEYVS IAEVIEHDVP GVVDRDLIHI AYSLSKDFGL PGFRVGIVYS YNDAVVSCAR
301: KMSSFGLVSS QTQLFLAKML GDEEFMARFL GXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
401: XXXXXPRLPR QHGRRDHGGG AGPDPALRAP APAAEGQGPA LGSQGPAPPQ PPAPRRHAFA VPRALQPHGS AAVAPVSARP RRQL
101: AQFMGQVRGW KARFDPDRVV MSGGATGAQE TLAFCLANPG EAFLVPTPYY PGFDRDCCWR SGVKLLPIEC HSSNDFKITR EAVVSAYESA RSNGVRVKGI
201: LITNPSNPLG TTADRATLAM LATFATEHRV HLICDEIYAG SVFAKPEYVS IAEVIEHDVP GVVDRDLIHI AYSLSKDFGL PGFRVGIVYS YNDAVVSCAR
301: KMSSFGLVSS QTQLFLAKML GDEEFMARFL GXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
401: XXXXXPRLPR QHGRRDHGGG AGPDPALRAP APAAEGQGPA LGSQGPAPPQ PPAPRRHAFA VPRALQPHGS AAVAPVSARP RRQL
001: MVAFATEKKQ DLNLLSKIAS GDGHGENSSY FDGWKAYEEN PFHPIDRPDG VIQMGLAENQ LCGDLMRKWV LKHPEASICT SEGVNQFSDI AIFQDYHGLP
101: EFRQAVAKFM EKTRNNKVKF DPDRIVMSGG ATGAHETVAF CLANPGDGFL VPTPYYPGFD RDLRWRTGVN LVPVTCHSSN GFKITVEALE AAYENARKSN
201: IPVKGLLVTN PSNPLGTTLD RECLKSLVNF TNDKGIHLIA DEIYAATTFG QSEFISVAEV IEEIEDCNRD LIHIVYSLSK DMGLPGLRVG IVYSYNDRVV
301: QIARKMSSFG LVSSQTQHLI AKMLSDEEFV DEFIRESKLR LAARHAEITT GLDGLGIGWL KAKAGLFLWM DLRNLLKTAT FDSETELWRV IVHQVKLNVS
401: PGGSFHCHEP GWFRVCFANM DHKTMETALE RIRVFTSQLE EETKPMAATT MMAKKKKKCW QSNLRLSFSD TRRFDDGFFS PHSPVPPSPL VRAQT
101: EFRQAVAKFM EKTRNNKVKF DPDRIVMSGG ATGAHETVAF CLANPGDGFL VPTPYYPGFD RDLRWRTGVN LVPVTCHSSN GFKITVEALE AAYENARKSN
201: IPVKGLLVTN PSNPLGTTLD RECLKSLVNF TNDKGIHLIA DEIYAATTFG QSEFISVAEV IEEIEDCNRD LIHIVYSLSK DMGLPGLRVG IVYSYNDRVV
301: QIARKMSSFG LVSSQTQHLI AKMLSDEEFV DEFIRESKLR LAARHAEITT GLDGLGIGWL KAKAGLFLWM DLRNLLKTAT FDSETELWRV IVHQVKLNVS
401: PGGSFHCHEP GWFRVCFANM DHKTMETALE RIRVFTSQLE EETKPMAATT MMAKKKKKCW QSNLRLSFSD TRRFDDGFFS PHSPVPPSPL VRAQT
Arabidopsis Description
ACS61-aminocyclopropane-1-carboxylate synthase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAR0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.