Factsheet for HORVU3Hr1G019430.6

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G019410.1
HORVU3Hr1G019430.6
HORVU4Hr1G009800.5

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26200.1	HORVU4Hr1G009800.5	AT2G22810.1	14983000
AT4G26200.1	HORVU3Hr1G019410.1	AT4G26200.1	14983000
AT4G26200.1	HORVU3Hr1G019430.6	AT4G26200.1	14983000

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G108700.1	Wheat	cytosol, plastid	85.12	80.97
TraesCS3A01G106600.1	Wheat	cytosol, plastid	84.65	80.53
TraesCS3B01G125200.1	Wheat	plastid	84.88	80.22
EES00139	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	79.3	73.65
Zm00001d039487_P001	Maize	mitochondrion	76.98	71.64
Os05t0319200-00	Rice	cytosol, mitochondrion, plastid	71.4	61.9
KRH41440	Soybean	cytosol	62.09	60.68
KRH60148	Soybean	cytosol	61.4	60.0
VIT_11s0016g02560.t01	Wine grape	cytosol, nucleus, peroxisome	61.4	59.33
Bra019117.1-P	Field mustard	cytosol	62.09	59.2
CDY42751	Canola	cytosol	62.09	59.2
AT4G26200.1	Thale cress	cytosol	61.4	59.06
KRH49039	Soybean	cytosol	60.93	58.74
Bra026456.1-P	Field mustard	cytosol	61.16	58.71
Solyc12g008740.1.1	Tomato	cytosol	59.07	58.53
CDX89355	Canola	cytosol	60.93	58.48
CDX94359	Canola	cytosol	60.93	58.48
CDY71142	Canola	cytosol	60.93	58.48
GSMUA_Achr10P...	Banana	cytosol	59.53	58.18
Solyc07g026900.1.1	Tomato	cytosol	59.53	58.05
KRH74169	Soybean	cytosol	59.77	57.62
CDX92755	Canola	cytosol	55.12	56.97
GSMUA_Achr4P30870_001	Banana	cytosol	53.95	54.98
CDY72652	Canola	cytosol	23.49	50.25
HORVU3Hr1G098750.1	Barley	cytosol, peroxisome	6.51	47.46
HORVU7Hr1G053970.1	Barley	mitochondrion	7.91	43.59
HORVU2Hr1G119710.1	Barley	mitochondrion	9.53	42.27
HORVU4Hr1G009800.5	Barley	cytosol, plastid	51.63	38.88
HORVU2Hr1G094230.2	Barley	cytosol	38.6	34.3
HORVU7Hr1G012940.1	Barley	cytosol	40.23	28.88
HORVU2Hr1G063740.6	Barley	peroxisome, vacuole	19.07	16.87
HORVU3Hr1G016440.3	Barley	cytosol	11.86	16.35
HORVU5Hr1G062990.1	Barley	cytosol	19.3	15.99
HORVU7Hr1G074250.1	Barley	cytosol, peroxisome	2.79	15.79
HORVU2Hr1G030820.1	Barley	mitochondrion	18.14	14.0
HORVU3Hr1G019410.1	Barley	endoplasmic reticulum	7.44	13.85
HORVU1Hr1G018540.17	Barley	cytosol, golgi, plastid	17.44	13.32
HORVU5Hr1G014730.8	Barley	cytosol, plastid, vacuole	7.67	10.41

Protein Annotations

MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	UniProt:A0A287KBW4	InterPro:Aminotransferase_I/II	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0030170	EnsemblPlantsGene:HORVU3Hr1G019430	EnsemblPlants:HORVU3Hr1G019430.6	InterPro:IPR015421	InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS
PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF28	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI000B479004	SEG:seg	:

Description

No Description!

Coordinates

chrchr3H:+:54275933..54278734

Molecular Weight (calculated)

43468.2 Da

IEP (calculated)

7.896

GRAVY (calculated)

-0.003

Length

430 amino acids

Sequence
(BLAST)

001: RTTLQEAVGH TLGRCHGQPF GRTLELPLGX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXVASFRDNA LFQDYHGLKT FRKAMASFME KIRGGKVRFD
101: PDRIVLTAGA TAANELLTFI LANPGDALLI PTPYYPGFDR DLRWRTGVNI VPVHCHSSNG FQVTVAALEA AYEEAAAAGM TVRGVLLTNP SNPLGTTVER
201: SVLEDVLDFV VRKNIHLISD EIYSGSVFAA PDLVSVAELV EARGGGGDVA GRVHIVYSLS KDLGLPGFRV GVVYSYNDAV VTAARRMSSF TLVSSQTQKT
301: LAAMLSDAAF AQEYIRTNRE RLRARHDHMV AGLARSGVPC LRSNAGLFVW MDMRRLLGDG GEATVADELR LWDLMLHEVK LNISPGSSCH CSEPGWFRVC
401: FANMSLDTLD VALARMSRFM DRWNKSSLQS

Best Arabidopsis Sequence Match ( AT4G26200.1 )
(BLAST)

001: MGLPLMMERS SNNNNVELSR VAVSDTHGED SPYFAGWKAY DENPYDESHN PSGVIQMGLA ENQVSFDLLE TYLEKKNPEG SMWGSKGAPG FRENALFQDY
101: HGLKTFRQAM ASFMEQIRGG KARFDPDRIV LTAGATAANE LLTFILADPN DALLVPTPYY PGFDRDLRWR TGVKIVPIHC DSSNHFQITP EALESAYQTA
201: RDANIRVRGV LITNPSNPLG ATVQKKVLED LLDFCVRKNI HLVSDEIYSG SVFHASEFTS VAEIVENIDD VSVKERVHIV YSLSKDLGLP GFRVGTIYSY
301: NDNVVRTARR MSSFTLVSSQ TQHMLASMLS DEEFTEKYIR INRERLRRRY DTIVEGLKKA GIECLKGNAG LFCWMNLGFL LEKKTKDGEL QLWDVILKEL
401: NLNISPGSSC HCSEVGWFRV CFANMSENTL EIALKRIHEF MDRRRRF

Arabidopsis Description

ACS71-aminocyclopropane-1-carboxylate synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9STR4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.