Factsheet for Solyc08g081540.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g095080.2.1
Solyc02g063540.1.1
Solyc02g091990.2.1
Solyc03g043890.2.1
Solyc05g050010.2.1
Solyc07g040990.2.1
Solyc08g008100.2.1
Solyc08g081540.2.1
Solyc08g081550.2.1
Solyc12g056180.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G11280.1	Solyc02g063540.1.1	AT2G22810.1	14983000
AT4G11280.1	Solyc02g091990.2.1	AT2G22810.1	14983000
AT4G11280.1	Solyc03g043890.2.1	AT2G22810.1	14983000
AT4G11280.1	Solyc01g095080.2.1	AT3G61510.1	14983000
AT4G11280.1	Solyc05g050010.2.1	AT3G61510.1	14983000
AT4G11280.1	Solyc08g008100.2.1	AT4G11280.1	14983000
AT4G11280.1	Solyc08g081540.2.1	AT4G11280.1	14983000
AT4G11280.1	Solyc08g081550.2.1	AT4G11280.1	14983000
AT4G11280.1	Solyc12g056180.1.1	AT4G11280.1	14983000
AT4G11280.1	Solyc07g040990.2.1	AT4G26080.1	19705149

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032096	Potato	cytosol	96.69	96.49
Solyc08g081550.2.1	Tomato	cytosol	91.93	94.07
Solyc08g008110.2.1	Tomato	cytosol, nucleus	16.77	80.2
VIT_02s0025g00360.t01	Wine grape	cytosol	73.08	73.39
Solyc08g008100.2.1	Tomato	nucleus	54.04	71.51
Solyc12g056180.1.1	Tomato	cytosol	69.77	71.25
KRH27892	Soybean	cytosol	68.32	68.75
KRH41241	Soybean	cytosol	67.7	67.56
KRH59970	Soybean	cytosol	67.29	67.15
Solyc01g095080.2.1	Tomato	cytosol	66.25	65.98
AT4G11280.1	Thale cress	cytosol	67.08	65.45
GSMUA_Achr4P29150_001	Banana	cytosol	65.22	64.81
CDY13251	Canola	cytosol	65.22	64.15
Solyc05g050010.2.1	Tomato	cytosol	62.73	63.66
GSMUA_AchrUn_...	Banana	cytosol	58.18	63.43
Bra035236.1-P	Field mustard	cytosol	63.77	63.11
CDX86796	Canola	cytosol	63.77	63.11
GSMUA_Achr4P24930_001	Banana	cytosol	61.49	61.75
TraesCS2A01G396400.1	Wheat	cytosol	60.04	59.67
TraesCS2D01G394200.1	Wheat	cytosol	59.83	59.47
TraesCS2B01G414800.1	Wheat	cytosol	59.83	59.47
EES12700	Sorghum	cytosol	59.83	58.86
Os04t0578000-01	Rice	cytosol	58.8	58.8
Zm00001d002592_P002	Maize	cytosol	58.59	58.35
Zm00001d026060_P003	Maize	cytosol	58.59	55.49
Solyc07g026900.1.1	Tomato	cytosol	50.31	55.1
Solyc12g008740.1.1	Tomato	cytosol	49.28	54.84
Solyc02g063540.1.1	Tomato	cytosol	31.88	54.23
Solyc02g091990.2.1	Tomato	cytosol	49.28	50.75
Solyc03g043890.2.1	Tomato	cytosol	48.24	49.47
Solyc04g077410.2.1	Tomato	cytosol	47.41	48.62
HORVU2Hr1G094230.2	Barley	cytosol	47.2	47.11
Solyc03g007070.2.1	Tomato	cytosol	38.1	34.39
Solyc08g079750.2.1	Tomato	plastid	37.27	32.85
Solyc01g007940.2.1	Tomato	cytosol	19.88	20.3
Solyc05g013380.2.1	Tomato	extracellular, nucleus, plastid	19.25	19.33
Solyc03g123600.2.1	Tomato	cytosol	18.84	18.8
Solyc06g063090.2.1	Tomato	extracellular	20.08	17.9
Solyc03g123610.2.1	Tomato	plastid	19.46	15.51

Protein Annotations

MapMan:11.5.1.1	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	ProteinID:AAF97615.1	InterPro:Aminotransferase_I/II	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016829	GO:GO:0016847	GO:GO:0030170	GO:GO:0042218	InterPro:IPR015421	InterPro:IPR015422
InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF6
InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	UniProt:Q9S853	SUPFAM:SSF53383	EnsemblPlantsGene:Solyc08g081540.2
EnsemblPlants:Solyc08g081540.2.1	UniParc:UPI00000A6F45	:	:	:	:

Description

1-amino-cyclopropane-1-carboxylate synthase [Source:UniProtKB/TrEMBL;Acc:Q9S853]

Coordinates

chr8:+:64567933..64570466

Molecular Weight (calculated)

54566.6 Da

IEP (calculated)

6.596

GRAVY (calculated)

-0.179

Length

483 amino acids

Sequence
(BLAST)

001: MVSISKNNQK QQLLSKIATN DGHGENSPYF DGWKAYANNP FHLTDNPTGV IQMGLAENQL CFDLIQEWMV NNPKASICTV EGAENFQDIA IFQDYHGLPE
101: FRQAVARFME KVRGDRVTFD PNRIVMSGGA TGAHEMLAFC LADPGDAFLV PTPYYPGFDR DLRWRTGVQL FPVVCESCND FKVTTKALEE AYEKAQQSNI
201: KIKGLLINNP SNPLGTLLDK DTLRDIVTFI NSKNIHLVCD EIYAATVFDQ PRFISVSEMV EEMIECNTDL IHIVYSLSKD LGFPGFRVGI VYSYNDTVVN
301: ISRKMSSFGL VSTQTQHMLA SMLSDEIFVE KFIAESSERL GKRQGMFTKG LAQVGISTLK SNAGLFFWMD LRRLLKEATF DGELELWRII INEVKLNVSP
401: GCSFHCSEPG WFRVCFANMD DETMRIALRR IRNFVLQTKG LNNIAAIKKQ CSRSKLQISL SFRRLDDFNS PAHSPMNSPL VRT

Best Arabidopsis Sequence Match ( AT4G11280.1 )
(BLAST)

001: MVAFATEKKQ DLNLLSKIAS GDGHGENSSY FDGWKAYEEN PFHPIDRPDG VIQMGLAENQ LCGDLMRKWV LKHPEASICT SEGVNQFSDI AIFQDYHGLP
101: EFRQAVAKFM EKTRNNKVKF DPDRIVMSGG ATGAHETVAF CLANPGDGFL VPTPYYPGFD RDLRWRTGVN LVPVTCHSSN GFKITVEALE AAYENARKSN
201: IPVKGLLVTN PSNPLGTTLD RECLKSLVNF TNDKGIHLIA DEIYAATTFG QSEFISVAEV IEEIEDCNRD LIHIVYSLSK DMGLPGLRVG IVYSYNDRVV
301: QIARKMSSFG LVSSQTQHLI AKMLSDEEFV DEFIRESKLR LAARHAEITT GLDGLGIGWL KAKAGLFLWM DLRNLLKTAT FDSETELWRV IVHQVKLNVS
401: PGGSFHCHEP GWFRVCFANM DHKTMETALE RIRVFTSQLE EETKPMAATT MMAKKKKKCW QSNLRLSFSD TRRFDDGFFS PHSPVPPSPL VRAQT

Arabidopsis Description

ACS61-aminocyclopropane-1-carboxylate synthase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAR0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.