Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g081550.2.1 | Tomato | cytosol | 80.2 | 17.16 |
| Solyc08g081540.2.1 | Tomato | cytosol | 80.2 | 16.77 |
| Solyc02g063540.1.1 | Tomato | cytosol | 46.53 | 16.55 |
| Solyc12g056180.1.1 | Tomato | cytosol | 77.23 | 16.49 |
| Solyc01g095080.2.1 | Tomato | cytosol | 70.3 | 14.64 |
| Solyc05g050010.2.1 | Tomato | cytosol | 67.33 | 14.29 |
| Solyc12g008740.1.1 | Tomato | cytosol | 50.49 | 11.75 |
| Solyc07g026900.1.1 | Tomato | cytosol | 49.51 | 11.34 |
| Solyc02g091990.2.1 | Tomato | cytosol | 48.51 | 10.45 |
| Solyc03g043890.2.1 | Tomato | cytosol | 47.52 | 10.19 |
| Solyc04g077410.2.1 | Tomato | cytosol | 47.52 | 10.19 |
| Solyc08g079750.2.1 | Tomato | plastid | 37.62 | 6.93 |
| Solyc03g007070.2.1 | Tomato | cytosol | 30.69 | 5.79 |
| Solyc05g013380.2.1 | Tomato | extracellular, nucleus, plastid | 15.84 | 3.33 |
| Solyc01g007940.2.1 | Tomato | cytosol | 14.85 | 3.17 |
| Solyc03g123600.2.1 | Tomato | cytosol | 11.88 | 2.48 |
| Solyc08g008100.2.1 | Tomato | nucleus | 8.91 | 2.47 |
| Solyc06g063090.2.1 | Tomato | extracellular | 12.87 | 2.4 |
| Solyc03g123610.2.1 | Tomato | plastid | 12.87 | 2.15 |
Protein Annotations
| EnsemblPlants:Solyc08g008110.2.1 | EnsemblPlantsGene:Solyc08g008110.2 | Gene3D:3.90.1150.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0030170 | InterPro:Aminotransferase_I/II | InterPro:IPR015422 |
| InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | PANTHER:PTHR43795 | PANTHER:PTHR43795:SF6 | PFAM:PF00155 | PRINTS:PR00753 |
| SUPFAM:SSF53383 | UniParc:UPI000276CA63 | UniProt:K4CIU5 | MapMan:50.4.4 | : | : |
Description
No Description!
Coordinates
chr8:-:2582675..2583524
Molecular Weight (calculated)
11501.4 Da
IEP (calculated)
4.224
GRAVY (calculated)
-0.400
Length
101 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLISKIATN DGHGENSAYF DGWKAYENDP FHPTQNPNGV IQMGLAENQL CFDLIQEWIV NNPKASICTY EGVQDFQDTA IFQDYHGLPE FRKVYIYIYM
101: X
101: X
001: MVAFATEKKQ DLNLLSKIAS GDGHGENSSY FDGWKAYEEN PFHPIDRPDG VIQMGLAENQ LCGDLMRKWV LKHPEASICT SEGVNQFSDI AIFQDYHGLP
101: EFRQAVAKFM EKTRNNKVKF DPDRIVMSGG ATGAHETVAF CLANPGDGFL VPTPYYPGFD RDLRWRTGVN LVPVTCHSSN GFKITVEALE AAYENARKSN
201: IPVKGLLVTN PSNPLGTTLD RECLKSLVNF TNDKGIHLIA DEIYAATTFG QSEFISVAEV IEEIEDCNRD LIHIVYSLSK DMGLPGLRVG IVYSYNDRVV
301: QIARKMSSFG LVSSQTQHLI AKMLSDEEFV DEFIRESKLR LAARHAEITT GLDGLGIGWL KAKAGLFLWM DLRNLLKTAT FDSETELWRV IVHQVKLNVS
401: PGGSFHCHEP GWFRVCFANM DHKTMETALE RIRVFTSQLE EETKPMAATT MMAKKKKKCW QSNLRLSFSD TRRFDDGFFS PHSPVPPSPL VRAQT
101: EFRQAVAKFM EKTRNNKVKF DPDRIVMSGG ATGAHETVAF CLANPGDGFL VPTPYYPGFD RDLRWRTGVN LVPVTCHSSN GFKITVEALE AAYENARKSN
201: IPVKGLLVTN PSNPLGTTLD RECLKSLVNF TNDKGIHLIA DEIYAATTFG QSEFISVAEV IEEIEDCNRD LIHIVYSLSK DMGLPGLRVG IVYSYNDRVV
301: QIARKMSSFG LVSSQTQHLI AKMLSDEEFV DEFIRESKLR LAARHAEITT GLDGLGIGWL KAKAGLFLWM DLRNLLKTAT FDSETELWRV IVHQVKLNVS
401: PGGSFHCHEP GWFRVCFANM DHKTMETALE RIRVFTSQLE EETKPMAATT MMAKKKKKCW QSNLRLSFSD TRRFDDGFFS PHSPVPPSPL VRAQT
Arabidopsis Description
ACS61-aminocyclopropane-1-carboxylate synthase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAR0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.