Skip to main content
crop-pal logo
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • plastid 2
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400031769 Potato cytosol 95.55 92.99
Solyc08g081540.2.1 Tomato cytosol 94.07 91.93
Solyc08g008110.2.1 Tomato cytosol, nucleus 17.16 80.2
VIT_02s0025g00360.t01 Wine grape cytosol 70.55 69.23
Solyc12g056180.1.1 Tomato cytosol 68.64 68.5
Solyc08g008100.2.1 Tomato nucleus 51.27 66.3
KRH27892 Soybean cytosol 66.1 65.0
KRH41241 Soybean cytosol 66.31 64.67
KRH59970 Soybean cytosol 65.68 64.05
Solyc01g095080.2.1 Tomato cytosol 65.47 63.71
AT4G11280.1 Thale cress cytosol 65.89 62.83
GSMUA_Achr4P29150_001 Banana cytosol 64.41 62.55
GSMUA_AchrUn_... Banana cytosol 58.26 62.08
CDY13251 Canola cytosol 64.41 61.91
Solyc05g050010.2.1 Tomato cytosol 61.86 61.34
Bra035236.1-P Field mustard cytosol 63.14 61.07
CDX86796 Canola cytosol 63.14 61.07
GSMUA_Achr4P24930_001 Banana cytosol 61.02 59.88
TraesCS2A01G396400.1 Wheat cytosol 59.75 58.02
TraesCS2D01G394200.1 Wheat cytosol 59.53 57.82
TraesCS2B01G414800.1 Wheat cytosol 59.53 57.82
Os04t0578000-01 Rice cytosol 58.9 57.56
EES12700 Sorghum cytosol 59.53 57.23
Zm00001d002592_P002 Maize cytosol 58.26 56.7
Zm00001d026060_P003 Maize cytosol 58.26 53.92
Solyc07g026900.1.1 Tomato cytosol 50.0 53.51
Solyc12g008740.1.1 Tomato cytosol 48.09 52.3
Solyc02g063540.1.1 Tomato cytosol 30.08 50.0
Solyc02g091990.2.1 Tomato cytosol 48.09 48.4
Solyc03g043890.2.1 Tomato cytosol 47.46 47.56
Solyc04g077410.2.1 Tomato cytosol 46.61 46.71
HORVU2Hr1G094230.2 Barley cytosol 46.4 45.25
Solyc03g007070.2.1 Tomato cytosol 37.08 32.71
Solyc08g079750.2.1 Tomato plastid 36.86 31.75
Solyc01g007940.2.1 Tomato cytosol 19.92 19.87
Solyc03g123600.2.1 Tomato cytosol 19.7 19.21
Solyc05g013380.2.1 Tomato extracellular, nucleus, plastid 19.49 19.13
Solyc06g063090.2.1 Tomato extracellular 20.34 17.71
Solyc03g123610.2.1 Tomato plastid 20.13 15.68
Protein Annotations
MapMan:11.5.1.1Gene3D:3.40.640.10Gene3D:3.90.1150.10InterPro:Aminotransferase_I/IIGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0030170InterPro:IPR015421
InterPro:IPR015422UniProt:K4CPF1InterPro:NHTrfase_class1_PyrdxlP-BSPFAM:PF00155PRINTS:PR00753ScanProsite:PS00105
PANTHER:PTHR43795PANTHER:PTHR43795:SF6InterPro:PyrdxlP-dep_TrfaseInterPro:PyrdxlP-dep_Trfase_dom1InterPro:PyrdxlP-dep_Trfase_majorSUPFAM:SSF53383
EnsemblPlantsGene:Solyc08g081550.2EnsemblPlants:Solyc08g081550.2.1UniParc:UPI000276C0D8:::
Description
No Description!
Coordinates
chr8:-:64571928..64574577
Molecular Weight (calculated)
53487.5 Da
IEP (calculated)
7.521
GRAVY (calculated)
-0.183
Length
472 amino acids
Sequence
(BLAST)
001: MVSISKNNQK QQLLSKIATN DGHGENSPYF DGWKAYANNP FHLTDNPTGV IQMGLAENQL CFDLIQEWVV NNPKASICTV EGAENFQDIA IFQDYHGLPE
101: FRQAVARFME KVRGDRVTFD PNRIVMSGGA TGAHEMLAFC LADPGDAFLV PTPYYPGFDR DLRWRTGVQL FPVPWKKHMK KAQQSNIKIK GLLINNPSNP
201: LGTLLDKDTL RDIVTFINSK NIHLVCDEIY AATVFDQPRF ISVSEIVEDM IECNKDLIHI VYSLSKDLGF PGFRVGIVYS YNDTVVNIAR KMSSFGLVST
301: QTQHLLASML SDEVFIDKFI AESSERLGER QGMFTKGLAE VGISTLKSNA GLFFWMDLRR LLKEATFDSE LELWRIIINE VKLNVSPGCS FHCSEPGWFR
401: VCFANMDDET MRIALKRISY FVLQPKGLNN IAAIKKQCSR RKLQISLSFR RLDHEFMNSP AHSPMNSPLV RT
Best Arabidopsis Sequence Match ( AT4G11280.1 )
(BLAST)
001: MVAFATEKKQ DLNLLSKIAS GDGHGENSSY FDGWKAYEEN PFHPIDRPDG VIQMGLAENQ LCGDLMRKWV LKHPEASICT SEGVNQFSDI AIFQDYHGLP
101: EFRQAVAKFM EKTRNNKVKF DPDRIVMSGG ATGAHETVAF CLANPGDGFL VPTPYYPGFD RDLRWRTGVN LVPVTCHSSN GFKITVEALE AAYENARKSN
201: IPVKGLLVTN PSNPLGTTLD RECLKSLVNF TNDKGIHLIA DEIYAATTFG QSEFISVAEV IEEIEDCNRD LIHIVYSLSK DMGLPGLRVG IVYSYNDRVV
301: QIARKMSSFG LVSSQTQHLI AKMLSDEEFV DEFIRESKLR LAARHAEITT GLDGLGIGWL KAKAGLFLWM DLRNLLKTAT FDSETELWRV IVHQVKLNVS
401: PGGSFHCHEP GWFRVCFANM DHKTMETALE RIRVFTSQLE EETKPMAATT MMAKKKKKCW QSNLRLSFSD TRRFDDGFFS PHSPVPPSPL VRAQT
Arabidopsis Description
ACS61-aminocyclopropane-1-carboxylate synthase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAR0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.