Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400031769 | Potato | cytosol | 95.55 | 92.99 |
Solyc08g081540.2.1 | Tomato | cytosol | 94.07 | 91.93 |
Solyc08g008110.2.1 | Tomato | cytosol, nucleus | 17.16 | 80.2 |
VIT_02s0025g00360.t01 | Wine grape | cytosol | 70.55 | 69.23 |
Solyc12g056180.1.1 | Tomato | cytosol | 68.64 | 68.5 |
Solyc08g008100.2.1 | Tomato | nucleus | 51.27 | 66.3 |
KRH27892 | Soybean | cytosol | 66.1 | 65.0 |
KRH41241 | Soybean | cytosol | 66.31 | 64.67 |
KRH59970 | Soybean | cytosol | 65.68 | 64.05 |
Solyc01g095080.2.1 | Tomato | cytosol | 65.47 | 63.71 |
AT4G11280.1 | Thale cress | cytosol | 65.89 | 62.83 |
GSMUA_Achr4P29150_001 | Banana | cytosol | 64.41 | 62.55 |
GSMUA_AchrUn_... | Banana | cytosol | 58.26 | 62.08 |
CDY13251 | Canola | cytosol | 64.41 | 61.91 |
Solyc05g050010.2.1 | Tomato | cytosol | 61.86 | 61.34 |
Bra035236.1-P | Field mustard | cytosol | 63.14 | 61.07 |
CDX86796 | Canola | cytosol | 63.14 | 61.07 |
GSMUA_Achr4P24930_001 | Banana | cytosol | 61.02 | 59.88 |
TraesCS2A01G396400.1 | Wheat | cytosol | 59.75 | 58.02 |
TraesCS2D01G394200.1 | Wheat | cytosol | 59.53 | 57.82 |
TraesCS2B01G414800.1 | Wheat | cytosol | 59.53 | 57.82 |
Os04t0578000-01 | Rice | cytosol | 58.9 | 57.56 |
EES12700 | Sorghum | cytosol | 59.53 | 57.23 |
Zm00001d002592_P002 | Maize | cytosol | 58.26 | 56.7 |
Zm00001d026060_P003 | Maize | cytosol | 58.26 | 53.92 |
Solyc07g026900.1.1 | Tomato | cytosol | 50.0 | 53.51 |
Solyc12g008740.1.1 | Tomato | cytosol | 48.09 | 52.3 |
Solyc02g063540.1.1 | Tomato | cytosol | 30.08 | 50.0 |
Solyc02g091990.2.1 | Tomato | cytosol | 48.09 | 48.4 |
Solyc03g043890.2.1 | Tomato | cytosol | 47.46 | 47.56 |
Solyc04g077410.2.1 | Tomato | cytosol | 46.61 | 46.71 |
HORVU2Hr1G094230.2 | Barley | cytosol | 46.4 | 45.25 |
Solyc03g007070.2.1 | Tomato | cytosol | 37.08 | 32.71 |
Solyc08g079750.2.1 | Tomato | plastid | 36.86 | 31.75 |
Solyc01g007940.2.1 | Tomato | cytosol | 19.92 | 19.87 |
Solyc03g123600.2.1 | Tomato | cytosol | 19.7 | 19.21 |
Solyc05g013380.2.1 | Tomato | extracellular, nucleus, plastid | 19.49 | 19.13 |
Solyc06g063090.2.1 | Tomato | extracellular | 20.34 | 17.71 |
Solyc03g123610.2.1 | Tomato | plastid | 20.13 | 15.68 |
Protein Annotations
MapMan:11.5.1.1 | Gene3D:3.40.640.10 | Gene3D:3.90.1150.10 | InterPro:Aminotransferase_I/II | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0030170 | InterPro:IPR015421 |
InterPro:IPR015422 | UniProt:K4CPF1 | InterPro:NHTrfase_class1_PyrdxlP-BS | PFAM:PF00155 | PRINTS:PR00753 | ScanProsite:PS00105 |
PANTHER:PTHR43795 | PANTHER:PTHR43795:SF6 | InterPro:PyrdxlP-dep_Trfase | InterPro:PyrdxlP-dep_Trfase_dom1 | InterPro:PyrdxlP-dep_Trfase_major | SUPFAM:SSF53383 |
EnsemblPlantsGene:Solyc08g081550.2 | EnsemblPlants:Solyc08g081550.2.1 | UniParc:UPI000276C0D8 | : | : | : |
Description
No Description!
Coordinates
chr8:-:64571928..64574577
Molecular Weight (calculated)
53487.5 Da
IEP (calculated)
7.521
GRAVY (calculated)
-0.183
Length
472 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSISKNNQK QQLLSKIATN DGHGENSPYF DGWKAYANNP FHLTDNPTGV IQMGLAENQL CFDLIQEWVV NNPKASICTV EGAENFQDIA IFQDYHGLPE
101: FRQAVARFME KVRGDRVTFD PNRIVMSGGA TGAHEMLAFC LADPGDAFLV PTPYYPGFDR DLRWRTGVQL FPVPWKKHMK KAQQSNIKIK GLLINNPSNP
201: LGTLLDKDTL RDIVTFINSK NIHLVCDEIY AATVFDQPRF ISVSEIVEDM IECNKDLIHI VYSLSKDLGF PGFRVGIVYS YNDTVVNIAR KMSSFGLVST
301: QTQHLLASML SDEVFIDKFI AESSERLGER QGMFTKGLAE VGISTLKSNA GLFFWMDLRR LLKEATFDSE LELWRIIINE VKLNVSPGCS FHCSEPGWFR
401: VCFANMDDET MRIALKRISY FVLQPKGLNN IAAIKKQCSR RKLQISLSFR RLDHEFMNSP AHSPMNSPLV RT
101: FRQAVARFME KVRGDRVTFD PNRIVMSGGA TGAHEMLAFC LADPGDAFLV PTPYYPGFDR DLRWRTGVQL FPVPWKKHMK KAQQSNIKIK GLLINNPSNP
201: LGTLLDKDTL RDIVTFINSK NIHLVCDEIY AATVFDQPRF ISVSEIVEDM IECNKDLIHI VYSLSKDLGF PGFRVGIVYS YNDTVVNIAR KMSSFGLVST
301: QTQHLLASML SDEVFIDKFI AESSERLGER QGMFTKGLAE VGISTLKSNA GLFFWMDLRR LLKEATFDSE LELWRIIINE VKLNVSPGCS FHCSEPGWFR
401: VCFANMDDET MRIALKRISY FVLQPKGLNN IAAIKKQCSR RKLQISLSFR RLDHEFMNSP AHSPMNSPLV RT
001: MVAFATEKKQ DLNLLSKIAS GDGHGENSSY FDGWKAYEEN PFHPIDRPDG VIQMGLAENQ LCGDLMRKWV LKHPEASICT SEGVNQFSDI AIFQDYHGLP
101: EFRQAVAKFM EKTRNNKVKF DPDRIVMSGG ATGAHETVAF CLANPGDGFL VPTPYYPGFD RDLRWRTGVN LVPVTCHSSN GFKITVEALE AAYENARKSN
201: IPVKGLLVTN PSNPLGTTLD RECLKSLVNF TNDKGIHLIA DEIYAATTFG QSEFISVAEV IEEIEDCNRD LIHIVYSLSK DMGLPGLRVG IVYSYNDRVV
301: QIARKMSSFG LVSSQTQHLI AKMLSDEEFV DEFIRESKLR LAARHAEITT GLDGLGIGWL KAKAGLFLWM DLRNLLKTAT FDSETELWRV IVHQVKLNVS
401: PGGSFHCHEP GWFRVCFANM DHKTMETALE RIRVFTSQLE EETKPMAATT MMAKKKKKCW QSNLRLSFSD TRRFDDGFFS PHSPVPPSPL VRAQT
101: EFRQAVAKFM EKTRNNKVKF DPDRIVMSGG ATGAHETVAF CLANPGDGFL VPTPYYPGFD RDLRWRTGVN LVPVTCHSSN GFKITVEALE AAYENARKSN
201: IPVKGLLVTN PSNPLGTTLD RECLKSLVNF TNDKGIHLIA DEIYAATTFG QSEFISVAEV IEEIEDCNRD LIHIVYSLSK DMGLPGLRVG IVYSYNDRVV
301: QIARKMSSFG LVSSQTQHLI AKMLSDEEFV DEFIRESKLR LAARHAEITT GLDGLGIGWL KAKAGLFLWM DLRNLLKTAT FDSETELWRV IVHQVKLNVS
401: PGGSFHCHEP GWFRVCFANM DHKTMETALE RIRVFTSQLE EETKPMAATT MMAKKKKKCW QSNLRLSFSD TRRFDDGFFS PHSPVPPSPL VRAQT
Arabidopsis Description
ACS61-aminocyclopropane-1-carboxylate synthase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAR0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.