CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plasma membrane 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45965	Canola	cytosol	95.6	92.08
AT1G62960.1	Thale cress	plastid	84.51	79.35
VIT_00s1764g00010.t01	Wine grape	cytosol	39.58	59.31
HORVU7Hr1G053970.1	Barley	mitochondrion	8.6	57.69
Solyc08g079750.2.1	Tomato	plastid	60.42	57.66
PGSC0003DMT400010000	Potato	plastid	60.23	57.27
HORVU2Hr1G119710.1	Barley	mitochondrion	10.32	55.67
GSMUA_Achr5P13730_001	Banana	golgi, mitochondrion	52.58	54.67
KRH27993	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	51.82	54.09
KRH77442	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	51.43	53.59
TraesCS7D01G060600.2	Wheat	golgi, mitochondrion	52.2	53.32
GSMUA_Achr1P18880_001	Banana	golgi, mitochondrion	51.24	52.86
HORVU3Hr1G098750.1	Barley	cytosol, peroxisome	5.93	52.54
TraesCS4A01G422900.1	Wheat	golgi	52.39	49.55
TraesCS7A01G066400.1	Wheat	cytosol, golgi, plastid	52.2	49.46
CDY46931	Canola	mitochondrion, plastid	46.85	49.0
CDX91604	Canola	mitochondrion, plastid	46.27	48.4
EER87775	Sorghum	plastid	50.86	48.1
Os06t0130400-01	Rice	plasma membrane	49.71	47.97
Zm00001d045479_P001	Maize	cytosol, peroxisome, plastid	50.1	47.46
HORVU7Hr1G012940.1	Barley	cytosol	51.82	45.24
CDY66472	Canola	cytosol	32.5	42.18
CDX75675	Canola	cytosol	34.99	40.58
CDY69462	Canola	cytosol	35.18	39.23
CDX69326	Canola	cytosol	34.99	39.02
CDX92755	Canola	cytosol	30.98	38.94
CDX94359	Canola	cytosol	33.27	38.84
CDY71142	Canola	cytosol	33.27	38.84
CDX89355	Canola	cytosol	33.08	38.62
GSMUA_Achr3P12300_001	Banana	mitochondrion	50.48	38.6
CDY42751	Canola	cytosol	33.27	38.58
CDX89520	Canola	cytosol	34.42	37.97
CDY23035	Canola	cytosol	33.65	37.77
CDY25639	Canola	cytosol	34.03	37.55
CDY02111	Canola	cytosol	33.65	37.45
CDY08163	Canola	cytosol	33.27	37.02
CDY05953	Canola	cytosol	33.08	36.81
CDY34015	Canola	cytosol	31.36	35.34
CDX81296	Canola	cytosol	29.64	35.31
CDY18674	Canola	cytosol	29.45	35.08
CDX83146	Canola	cytosol	30.98	34.91
CDY72652	Canola	cytosol	13.38	34.83
CDX86796	Canola	cytosol	31.74	34.02
CDY13251	Canola	cytosol	31.74	33.81
CDY11360	Canola	cytosol	30.4	33.62
CDY65356	Canola	cytosol	29.83	32.98
CDY15174	Canola	cytosol	31.17	32.86
CDX90035	Canola	cytosol	27.53	32.21
HORVU3Hr1G016440.3	Barley	cytosol	18.74	31.41
CDY43579	Canola	cytosol, mitochondrion, plastid	8.22	22.4
CDX91708	Canola	peroxisome	15.11	19.6
CDY25780	Canola	peroxisome	14.91	19.35
CDY66294	Canola	cytosol	17.21	18.71
CDY61225	Canola	peroxisome	17.02	18.5
CDY44130	Canola	cytosol	16.83	18.41
CDY41452	Canola	peroxisome	16.83	18.41
CDY04729	Canola	cytosol	16.83	18.41
CDY26256	Canola	mitochondrion	18.74	18.25
CDX83914	Canola	mitochondrion	18.74	18.11
CDX96776	Canola	mitochondrion	18.74	18.08
CDX83913	Canola	cytosol, nucleus, peroxisome	4.4	17.97
CDY21752	Canola	mitochondrion	18.74	17.92
CDX81815	Canola	mitochondrion	18.74	17.85
CDY48485	Canola	plastid	18.36	17.78
CDY12474	Canola	peroxisome, plastid	17.78	17.32
CDY25781	Canola	cytosol	1.91	17.24
CDX68271	Canola	mitochondrion	4.21	17.19
CDY50645	Canola	cytosol	6.69	16.2
CDY03822	Canola	cytosol	3.82	15.5
CDX91589	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	3.82	15.27
CDX88411	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	3.82	15.27
CDX86159	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	3.82	15.27
CDX68272	Canola	nucleus	2.49	11.71
CDX86161	Canola	cytosol	2.68	10.61
VIT_02s0025g04980.t01	Wine grape	cytosol, nucleus	33.27	10.02

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.4.4	GO:A0A078I7T5	UniProt:A0A078I7T5	InterPro:Aminotransferase_I/II
EnsemblPlants:CDY45474	ProteinID:CDY45474	ProteinID:CDY45474.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021
GO:GO:0030170	EnsemblPlantsGene:GSBRNA2T00082111001	InterPro:IPR015421	InterPro:IPR015422	PFAM:PF00155	PRINTS:PR00753
PANTHER:PTHR43795	PANTHER:PTHR43795:SF11	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383
TMHMM:TMhelix	UniParc:UPI0004EE6D18	SEG:seg	:	:	:

Description

BnaC09g12920DBnaC09g12920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I7T5]

Coordinates

chrLK032626:+:169222..171233

Molecular Weight (calculated)

57183.0 Da

IEP (calculated)

5.897

GRAVY (calculated)

-0.187

Length

523 amino acids

Sequence
(BLAST)

001: MTRTEPNRSS KSESENSGGG GGGTTAMRVI VPLQGVVQGR GGLFLGSVIP CAFFYFLQFY LKRNRKNEPD SGEPIPNPDS DSASPDPTRS QSVGNLTELA
101: TASVSGRASC VIKGGDSPYH VGQKRVEEDP YDESGNPDGV IELGSAHTTK MDWVSEDPGE AISDGLCMSG IASYEPCHGL IELKTAVAGF MSEATKNSVS
201: FDPSQLVLTS GAASAIEILS FCLADSGNAF LVPTPCSPGY DRDVKWRTGV DLIHVPCRSA DNFNISMLVL DRGFYLAKKR GVKIRGVIIS NPWNPTGTLL
301: TRENLYALLD FARERNIHII SNEVFAGSVH EEGGEFVSMA EIVDTEENVD RERVHIIYDL SKDLSFPGLR TAAIYSFNES VLSASRKLTT LSPVSSPTQH
401: LLISAISSPK FVQRFVKTNR ERLMRVYTEL VKGLKELGIE CTRSSGGFFC WVDMRGFMSS YSEKGEIELW NKLLNIGKIN VIPGSCCHCI EPGWFRLCFS
501: NLSETDVPVV MNRIRKVCET CKS

Best Arabidopsis Sequence Match ( AT1G62960.1 )
(BLAST)

001: MTRTEPNRSR SSNSDSDKNS GNVGGGRTTG MRVIVPLQGV VQGRGGLFLG SVIPCAFFYF LQFYLKRNRK NDESDNSGEQ NSSASSSSSP NSGLPDPTRS
101: QSAGHLTELT GLPRSLSRIL LSPRNSGGAV SVSGRVNCVL KGGDSSPYYV GQKRVEDDPY DELGNPDGVI QLGLAQNNKL SLDDWVLENP KEAISDGLSI
201: SGIASYEPSD GLLELKMAVA GFMTEATKNS VTFDPSQLVL TSGASSAIEI LSFCLADSGN AFLVPTPCSP GYDRDVKWRT GVDIIHVPCR SADNFNMSMV
301: VLDRAFYQAK KRGVRIRGII ISNPSNPMGS LLSRENLYAL LDFARERNIH IISNEIFAGS VHGEEGEFVS MAEIVDTEEN IDRERVHIVY DLSKDLSFRG
401: LRSAAIYSFN ESVLSASRKL TTLSPVSSPT QHLLISAISN PKNVQRFVKT NRQRLQSIYT ELVEGLKELG IECTRSNGGF YCWADMRGLI SSYSEKGEIE
501: LWNKLLNIGK INVIPGSCCH CIEPGWFRIC FSNLSERDVP VVMNRIRKVC ETCKSQN

Arabidopsis Description

ACS10Probable aminotransferase ACS10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ10]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.