CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, plastid

Predictor Summary:

nucleus 1
plastid 4
endoplasmic reticulum 1
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77442	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	91.62	91.43
VIT_00s1764g00010.t01	Wine grape	cytosol	43.71	62.75
GSMUA_Achr5P13730_001	Banana	golgi, mitochondrion	57.88	57.65
Solyc08g079750.2.1	Tomato	plastid	62.48	57.12
PGSC0003DMT400010000	Potato	plastid	62.08	56.55
GSMUA_Achr1P18880_001	Banana	golgi, mitochondrion	57.09	56.41
TraesCS7D01G060600.2	Wheat	golgi, mitochondrion	56.89	55.66
HORVU7Hr1G053970.1	Barley	mitochondrion	8.18	52.56
CDY45474	Canola	cytosol	54.09	51.82
TraesCS7A01G066400.1	Wheat	cytosol, golgi, plastid	57.09	51.81
AT1G62960.1	Thale cress	plastid	57.48	51.71
KRH38710	Soybean	plastid	54.49	51.61
HORVU2Hr1G119710.1	Barley	mitochondrion	9.98	51.55
KRH09217	Soybean	plastid	54.09	51.33
TraesCS4A01G422900.1	Wheat	golgi	56.49	51.18
Os06t0130400-01	Rice	plasma membrane	55.09	50.92
CDY45965	Canola	cytosol	54.29	50.09
EER87775	Sorghum	plastid	55.09	49.91
Bra027008.1-P	Field mustard	cytosol	54.09	49.91
Zm00001d045479_P001	Maize	cytosol, peroxisome, plastid	54.89	49.82
HORVU3Hr1G098750.1	Barley	cytosol, peroxisome	5.79	49.15
HORVU7Hr1G012940.1	Barley	cytosol	56.49	47.25
KRH41440	Soybean	cytosol	37.13	42.27
KRH60148	Soybean	cytosol	36.93	42.05
KRH49039	Soybean	cytosol	36.93	41.48
KRH74169	Soybean	cytosol	36.33	40.81
GSMUA_Achr3P12300_001	Banana	mitochondrion	54.89	40.2
KRH61460	Soybean	cytosol	27.35	39.14
KRH28319	Soybean	cytosol	35.53	37.79
KRH04373	Soybean	cytosol	35.73	37.68
KRH65284	Soybean	cytosol	9.18	37.4
KRH58165	Soybean	cytosol	35.73	37.29
KRH27892	Soybean	cytosol	35.73	37.29
KRH77167	Soybean	cytosol	34.93	37.23
KRH52156	Soybean	cytosol	34.13	36.62
KRH41241	Soybean	cytosol	34.73	35.95
KRH48058	Soybean	cytosol	33.73	35.65
KRH59970	Soybean	cytosol	34.33	35.54
KRH06585	Soybean	cytosol	33.33	35.23
KRH00855	Soybean	cytosol	33.33	34.79
KRH40379	Soybean	cytosol	32.73	33.81
HORVU3Hr1G016440.3	Barley	cytosol	18.96	30.45
KRH74536	Soybean	cytosol	16.17	16.84
KRH69622	Soybean	cytosol	16.17	16.84
KRH06285	Soybean	mitochondrion	17.17	16.04
KRH47719	Soybean	endoplasmic reticulum	17.17	15.9
VIT_02s0025g04980.t01	Wine grape	cytosol, nucleus	33.93	9.79

Protein Annotations

EntrezGene:100783490	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.4.4	EMBL:ACUP02006737	InterPro:Aminotransferase_I/II
EnsemblPlantsGene:GLYMA_11G028200	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0030170	UniProt:I1LGJ8
InterPro:IPR015421	InterPro:IPR015422	EnsemblPlants:KRH27993	ProteinID:KRH27993	ProteinID:KRH27993.1	PFAM:PF00155
PRINTS:PR00753	PANTHER:PTHR43795	PANTHER:PTHR43795:SF11	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	TMHMM:TMhelix	UniParc:UPI000233D586	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr11:+:2023320..2026136

Molecular Weight (calculated)

55613.6 Da

IEP (calculated)

7.467

GRAVY (calculated)

-0.066

Length

501 amino acids

Sequence
(BLAST)

001: MRVIVPLQGV VQGTGGLFWG SVIPCALFYF LQLYFKTKTP HHPPPSQNNH KDDDSTTFHR SLSSNHRHST TTASAYVSPR ANSITAANSP YFLGLHKLAD
101: DPYHETHNPD GVIQLSLHQS TLSLDLIQDW IHHNGSTAVF GTPLGISRIV PYQPLHGLME LKVAVAGFMS QVLENLIFFN TSRMVLTAGA TSAIEILSFC
201: LADHGNAFLV PTPLSPGFDG VVKWRTGVEI VPVPCRSTDD FNLSITSIER TFNQAKMRGQ KVRGIIINNP SNPAGKLLDR ETLLDLLDFA REKNIHIISN
301: EMFASSSYGN EEFVSMAEIM EAEDHDRDRV HVVFGLSNEL SVPGLKVGVI YSYNDNVVAA SSKLARFSTV SAPTQRLLIS MLSDTSFVQN FIEVNRLRLR
401: KMYNTFVAGL KQLGIECTRS SGGFCCWADM SRLIRSYSEK GELELWDRLL NVAKINVTPG SSCHCIEPGW FRFCFATSTE KAVSVVMERL RRIVEATNGH
501: S

Best Arabidopsis Sequence Match ( AT1G62960.1 )
(BLAST)

001: MTRTEPNRSR SSNSDSDKNS GNVGGGRTTG MRVIVPLQGV VQGRGGLFLG SVIPCAFFYF LQFYLKRNRK NDESDNSGEQ NSSASSSSSP NSGLPDPTRS
101: QSAGHLTELT GLPRSLSRIL LSPRNSGGAV SVSGRVNCVL KGGDSSPYYV GQKRVEDDPY DELGNPDGVI QLGLAQNNKL SLDDWVLENP KEAISDGLSI
201: SGIASYEPSD GLLELKMAVA GFMTEATKNS VTFDPSQLVL TSGASSAIEI LSFCLADSGN AFLVPTPCSP GYDRDVKWRT GVDIIHVPCR SADNFNMSMV
301: VLDRAFYQAK KRGVRIRGII ISNPSNPMGS LLSRENLYAL LDFARERNIH IISNEIFAGS VHGEEGEFVS MAEIVDTEEN IDRERVHIVY DLSKDLSFRG
401: LRSAAIYSFN ESVLSASRKL TTLSPVSSPT QHLLISAISN PKNVQRFVKT NRQRLQSIYT ELVEGLKELG IECTRSNGGF YCWADMRGLI SSYSEKGEIE
501: LWNKLLNIGK INVIPGSCCH CIEPGWFRIC FSNLSERDVP VVMNRIRKVC ETCKSQN

Arabidopsis Description

ACS10Probable aminotransferase ACS10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ10]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.