CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045479_P001	Maize	cytosol, peroxisome, plastid	91.5	91.67
HORVU2Hr1G119710.1	Barley	mitochondrion	15.01	85.57
HORVU7Hr1G053970.1	Barley	mitochondrion	11.93	84.62
TraesCS7D01G060600.2	Wheat	golgi, mitochondrion	78.12	84.38
TraesCS4A01G422900.1	Wheat	golgi	81.74	81.74
Os06t0130400-01	Rice	plasma membrane	79.57	81.18
TraesCS7A01G066400.1	Wheat	cytosol, golgi, plastid	80.11	80.25
HORVU7Hr1G012940.1	Barley	cytosol	81.01	74.79
GSMUA_Achr1P18880_001	Banana	golgi, mitochondrion	62.21	67.85
HORVU3Hr1G098750.1	Barley	cytosol, peroxisome	7.05	66.1
PGSC0003DMT400010000	Potato	plastid	59.13	59.45
Solyc08g079750.2.1	Tomato	plastid	58.77	59.31
HORVU3Hr1G016440.3	Barley	cytosol	33.45	59.29
VIT_00s1764g00010.t01	Wine grape	cytosol	37.25	59.03
PGSC0003DMT400079664	Potato	golgi, mitochondrion, plastid	53.53	58.73
VIT_16s0022g02010.t01	Wine grape	cytosol	56.78	58.36
CDY46931	Canola	mitochondrion, plastid	51.9	57.4
Bra022560.1-P	Field mustard	mitochondrion, plastid	51.9	57.4
CDX91604	Canola	mitochondrion, plastid	51.54	57.0
AT5G51690.1	Thale cress	golgi, mitochondrion	50.81	56.77
KRH77442	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	50.81	55.98
KRH38710	Soybean	plastid	53.35	55.77
KRH09217	Soybean	plastid	53.16	55.68
Solyc03g007070.2.1	Tomato	cytosol	53.35	55.14
KRH27993	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	49.91	55.09
AT1G62960.1	Thale cress	plastid	51.54	51.17
CDY45474	Canola	cytosol	48.1	50.86
CDY45965	Canola	cytosol	49.91	50.83
Bra027008.1-P	Field mustard	cytosol	49.91	50.83
GSMUA_Achr3P12300_001	Banana	mitochondrion	61.12	49.42
EES00139	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	36.35	43.41
EER90948	Sorghum	cytosol	35.8	39.84
EES12700	Sorghum	cytosol	32.37	36.46
KXG34265	Sorghum	cytosol	16.27	18.83
OQU91865	Sorghum	cytosol	10.31	18.81
KXG38638	Sorghum	cytosol	16.27	18.22
KXG35682	Sorghum	cytosol	15.01	16.77
EER99708	Sorghum	mitochondrion	16.09	16.45
VIT_02s0025g04980.t01	Wine grape	cytosol, nucleus	31.28	9.97

Protein Annotations

Gene3D:3.40.640.10	Gene3D:3.90.1150.10	MapMan:50.4.4	EntrezGene:8068383	InterPro:Aminotransferase_I/II	UniProt:C5Z3A4
EnsemblPlants:EER87775	ProteinID:EER87775	ProteinID:EER87775.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422
InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00753	ScanProsite:PS00105	PANTHER:PTHR43795	PANTHER:PTHR43795:SF7
InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	EnsemblPlantsGene:SORBI_3010G020800	SUPFAM:SSF53383	UniParc:UPI0001A88E9A
RefSeq:XP_002436408.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:1695390..1698328

Molecular Weight (calculated)

60755.7 Da

IEP (calculated)

8.512

GRAVY (calculated)

-0.213

Length

553 amino acids

Sequence
(BLAST)

001: MRDDGDEDGS ATSRATTTTR RRKPAPTSPS RDRRPRADGG MRIVVPLQGV VQGRGGLVLG SLIPCALFYF FQLYIKRNRP APAPGSPPAP TSGTSNASPI
101: HRSHSRGLLT PRGAPSLSAR GAVVRAGDED SLYYAGLRRC ADDPYHPASN PGGVINLGLA ENHLSLDLVG RWMEEHAGAA MLDGLAGAGE EVRDLTIRGL
201: ATYQPYDGIL ALKMALAEFM RQIMHGSVSF DPSQMVITSG ATPAMEILSF CIADPGNAFL VPSPYYPGWD RDIKWRTGVE LIPVPCRSTD NFNISITALE
301: IAYKQAKKRG VRVRGVLISN PSNPTGGIVP RETLHDLLVF AADKNIHLIS DEIFAGSTYG SDKFVSVADV VDEVEDFDKG RVHIIYGLSK DLSLAGFRVG
401: VIYSYNEHIV SAAAKIARFS SVSSPTQRLL ISMLSDEKFI SEYIKVNKER LRKMYLLFAD ALKQVGIECF KSSGGFYCWA DMSRYIRSYS EKGERKLWDR
501: LLEEAKVNVT PGSSCHCIEP GWFRCCFTAL SEEDIPVLVE RLRRVTDSHK SNR

Best Arabidopsis Sequence Match ( AT5G51690.1 )
(BLAST)

001: MRLIVPLRGV IQGRGGLFVG SLIPCCLFYF LQLYLKRRRP PPSDPTDLPR TFSRTNLFSR GNSIGRVRVS SRAVPVAKPS DSPYYIGLER VKTDPYDRIT
101: NTDGIIQLGL AESTLCFDLL QRWMSENLME SMMQSDDGEF DISSIAMYKP FEGLLELRVA FADFMSRIMG GNVSFDPSNM VITAGGTPAI EVLAFCLADH
201: GNAFLIPTPY YPGFDRDIKF RTGVELIPVH CRSSDNFTVT VSALEQALNQ ARKRGSKVSG ILFSNPSNPV GNILSRETLC DILRFAQEKN IHVISDEIFA
301: GSVYGDKEFV SMAEIAGSGE FDKTRVHIIY GLSKDLSIPG FRAGVIYSFH EDVVNAAKKL MRFSSVPVLV QRILISLLSD VRFIEGYMAA HRQRIRDKHI
401: RFVEGLKQLG IPCAESGGGL YCWVDMSSLL TSYSEKGELE LFEKLLTVAK INATPGTACY CIEPGWFRCC FTALADEDIP VIMERIRQLA ESFRS

Arabidopsis Description

ACS12Probable aminotransferase ACS12 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYY0]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.